Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

Click here to switch to the map view.

The map label for this gene is 15887474

Identifier: 15887474

GI number: 15887474

Start: 124361

End: 124912

Strand: Direct

Name: 15887474

Synonym: Atu0120

Alternate gene names: NA

Gene position: 124361-124912 (Clockwise)

Preceding gene: 159184168

Following gene: 159184169

Centisome position: 4.38

GC content: 57.43

Gene sequence:

>552_bases
ATGAAAAACGACACAGCAGCACTTGCCGCCGATATCGTCGATTTCTGGAAGAAGGCCGGACCGGACAAATGGTTCGACAA
GGATGCCGCCTTCGACAATCACTTTCACGATCGCTTCCGTGATGCCCATTTTGCTGCCGCAAGGCGTGAACTGGATGGCT
GGCTGGAAGGCGCAGAAAGCAGCCTTGCTTTGATGCTTCTGCTGGATCAATTCCCGCGCAACTGTTTTCGCGGCACAGCA
CATATGTATGCCACGGACCCGCTGGCGCGGTTCTTTGCCGACGAGGCCATCCGCCGTGGTCATGATCAGGCGGTGAGCGA
GGATTTACGCGTTTTCTTCTATCTACCGTTCTCGCATGCGGAGGATATCGCGGCCCAGCAACGCGCCTGTGACCTGAACC
AGCCGCTTGGCGGGCTTTATCTCCACCACGCCGAAGAACATCGCGATATTGTCGAGCGTTTCGGCCGCTTTCCGCATCGC
AACGGGATATTGCTGCGGGAAACGACGCCGGAGGAACGGCAATATCTGGAAGAGGGCGGCTTTTCCGGCTGA

Upstream 100 bases:

>100_bases
AAACTCGACCGGTTGACGGAAAGGTTCCTGAGCCTTGAGGAGCAATCTCTGGACGCGCCTGCCATCACCAGGCCGCCGCA
TTATTGACAGGGAAGAGCAG

Downstream 100 bases:

>100_bases
ATCCGAAACAAAAAACGCCGCCAATCCCGAAGGATGGCGGCGTTTCTGATGTTTAAGACCGGCGGCGATCAGCCGTCGAA
GAATTCCTTCATCCGGGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MKNDTAALAADIVDFWKKAGPDKWFDKDAAFDNHFHDRFRDAHFAAARRELDGWLEGAESSLALMLLLDQFPRNCFRGTA
HMYATDPLARFFADEAIRRGHDQAVSEDLRVFFYLPFSHAEDIAAQQRACDLNQPLGGLYLHHAEEHRDIVERFGRFPHR
NGILLRETTPEERQYLEEGGFSG

Sequences:

>Translated_183_residues
MKNDTAALAADIVDFWKKAGPDKWFDKDAAFDNHFHDRFRDAHFAAARRELDGWLEGAESSLALMLLLDQFPRNCFRGTA
HMYATDPLARFFADEAIRRGHDQAVSEDLRVFFYLPFSHAEDIAAQQRACDLNQPLGGLYLHHAEEHRDIVERFGRFPHR
NGILLRETTPEERQYLEEGGFSG
>Mature_183_residues
MKNDTAALAADIVDFWKKAGPDKWFDKDAAFDNHFHDRFRDAHFAAARRELDGWLEGAESSLALMLLLDQFPRNCFRGTA
HMYATDPLARFFADEAIRRGHDQAVSEDLRVFFYLPFSHAEDIAAQQRACDLNQPLGGLYLHHAEEHRDIVERFGRFPHR
NGILLRETTPEERQYLEEGGFSG

Specific function: Unknown

COG id: COG3803

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21081; Mature: 21081

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNDTAALAADIVDFWKKAGPDKWFDKDAAFDNHFHDRFRDAHFAAARRELDGWLEGAES
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
SLALMLLLDQFPRNCFRGTAHMYATDPLARFFADEAIRRGHDQAVSEDLRVFFYLPFSHA
HHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHCCCHHHHHHCCEEEEEECCCHH
EDIAAQQRACDLNQPLGGLYLHHAEEHRDIVERFGRFPHRNGILLRETTPEERQYLEEGG
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHCC
FSG
CCC
>Mature Secondary Structure
MKNDTAALAADIVDFWKKAGPDKWFDKDAAFDNHFHDRFRDAHFAAARRELDGWLEGAES
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
SLALMLLLDQFPRNCFRGTAHMYATDPLARFFADEAIRRGHDQAVSEDLRVFFYLPFSHA
HHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHCCCHHHHHHCCEEEEEECCCHH
EDIAAQQRACDLNQPLGGLYLHHAEEHRDIVERFGRFPHRNGILLRETTPEERQYLEEGG
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHCC
FSG
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA