Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15887474
Identifier: 15887474
GI number: 15887474
Start: 124361
End: 124912
Strand: Direct
Name: 15887474
Synonym: Atu0120
Alternate gene names: NA
Gene position: 124361-124912 (Clockwise)
Preceding gene: 159184168
Following gene: 159184169
Centisome position: 4.38
GC content: 57.43
Gene sequence:
>552_bases ATGAAAAACGACACAGCAGCACTTGCCGCCGATATCGTCGATTTCTGGAAGAAGGCCGGACCGGACAAATGGTTCGACAA GGATGCCGCCTTCGACAATCACTTTCACGATCGCTTCCGTGATGCCCATTTTGCTGCCGCAAGGCGTGAACTGGATGGCT GGCTGGAAGGCGCAGAAAGCAGCCTTGCTTTGATGCTTCTGCTGGATCAATTCCCGCGCAACTGTTTTCGCGGCACAGCA CATATGTATGCCACGGACCCGCTGGCGCGGTTCTTTGCCGACGAGGCCATCCGCCGTGGTCATGATCAGGCGGTGAGCGA GGATTTACGCGTTTTCTTCTATCTACCGTTCTCGCATGCGGAGGATATCGCGGCCCAGCAACGCGCCTGTGACCTGAACC AGCCGCTTGGCGGGCTTTATCTCCACCACGCCGAAGAACATCGCGATATTGTCGAGCGTTTCGGCCGCTTTCCGCATCGC AACGGGATATTGCTGCGGGAAACGACGCCGGAGGAACGGCAATATCTGGAAGAGGGCGGCTTTTCCGGCTGA
Upstream 100 bases:
>100_bases AAACTCGACCGGTTGACGGAAAGGTTCCTGAGCCTTGAGGAGCAATCTCTGGACGCGCCTGCCATCACCAGGCCGCCGCA TTATTGACAGGGAAGAGCAG
Downstream 100 bases:
>100_bases ATCCGAAACAAAAAACGCCGCCAATCCCGAAGGATGGCGGCGTTTCTGATGTTTAAGACCGGCGGCGATCAGCCGTCGAA GAATTCCTTCATCCGGGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MKNDTAALAADIVDFWKKAGPDKWFDKDAAFDNHFHDRFRDAHFAAARRELDGWLEGAESSLALMLLLDQFPRNCFRGTA HMYATDPLARFFADEAIRRGHDQAVSEDLRVFFYLPFSHAEDIAAQQRACDLNQPLGGLYLHHAEEHRDIVERFGRFPHR NGILLRETTPEERQYLEEGGFSG
Sequences:
>Translated_183_residues MKNDTAALAADIVDFWKKAGPDKWFDKDAAFDNHFHDRFRDAHFAAARRELDGWLEGAESSLALMLLLDQFPRNCFRGTA HMYATDPLARFFADEAIRRGHDQAVSEDLRVFFYLPFSHAEDIAAQQRACDLNQPLGGLYLHHAEEHRDIVERFGRFPHR NGILLRETTPEERQYLEEGGFSG >Mature_183_residues MKNDTAALAADIVDFWKKAGPDKWFDKDAAFDNHFHDRFRDAHFAAARRELDGWLEGAESSLALMLLLDQFPRNCFRGTA HMYATDPLARFFADEAIRRGHDQAVSEDLRVFFYLPFSHAEDIAAQQRACDLNQPLGGLYLHHAEEHRDIVERFGRFPHR NGILLRETTPEERQYLEEGGFSG
Specific function: Unknown
COG id: COG3803
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21081; Mature: 21081
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNDTAALAADIVDFWKKAGPDKWFDKDAAFDNHFHDRFRDAHFAAARRELDGWLEGAES CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH SLALMLLLDQFPRNCFRGTAHMYATDPLARFFADEAIRRGHDQAVSEDLRVFFYLPFSHA HHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHCCCHHHHHHCCEEEEEECCCHH EDIAAQQRACDLNQPLGGLYLHHAEEHRDIVERFGRFPHRNGILLRETTPEERQYLEEGG HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHCC FSG CCC >Mature Secondary Structure MKNDTAALAADIVDFWKKAGPDKWFDKDAAFDNHFHDRFRDAHFAAARRELDGWLEGAES CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH SLALMLLLDQFPRNCFRGTAHMYATDPLARFFADEAIRRGHDQAVSEDLRVFFYLPFSHA HHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHCCCHHHHHHCCEEEEEECCCHH EDIAAQQRACDLNQPLGGLYLHHAEEHRDIVERFGRFPHRNGILLRETTPEERQYLEEGG HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHCC FSG CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA