Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 15887466

Identifier: 15887466

GI number: 15887466

Start: 116299

End: 117018

Strand: Direct

Name: 15887466

Synonym: Atu0111

Alternate gene names: NA

Gene position: 116299-117018 (Clockwise)

Preceding gene: 159184162

Following gene: 159184163

Centisome position: 4.09

GC content: 55.83

Gene sequence:

>720_bases
ATGCACGCCCCGCTCGTTTCGAAAGACCTCGACTATATCTCTACCGCCAACCACGATCAGCCACCACGCCATCTGGGCAG
CCGTTTCAGTGCAGAGGGTGAGTTTTTGCCGGAGCCCGGCAATACGGTCGTGTGCCATCTTGTCGAGGGATCGCAGACCG
AAAGCGCTATCGTCTCGACCCGTCAGCGTTTCCTTGACATGCCGGAGGCGTCGCAACTCGCCTTCACACCGGTTTCCAGC
CTGCATATGACGGTTTTTCAAGGTGTTATCGAGTCGCGCCGGGCTCTGCCCTACTGGCCGCAGACCTTGCCGCTCGATAC
GCCGATCGACGCGGTGACGGACTATTATCGTGATCGTCTTTCTACTTTTCCGACACTGCCGGCATTCAACATGCGGGTTA
CGGGCCTGCGCCCGGTCGGAATGGTCATGAAGGGAGCGACTGCTGAGGACGATAGCATCGTGGCTCTTTGGCGCGATACA
TTCGCCGATTTTTTCGGCTACCGTCATCCCGATCATGACACCTATGAGTTTCATATCACCTTGTCCTACATTGTCAGTTG
GTTTGAACCCGAGTGTCTGCCGCGCTGGCAGGCGATGCTCGATGAGGAACTGGAAAAACTGCGCGTCGCAGCGCCTGTTA
TACAGATGCGCCCGCCAGCTTTCTGTGAATTCAAGGATATGAACCACTTCAAGGAACTTGTCGTTTTCGATAAGAGGTGA

Upstream 100 bases:

>100_bases
GACAATTGGGATGAGGCGCATTGACTGGCCTTTGAGCGGTCGATGTCATTGCTTTGTCGTCTGTGCAGACTAGGGGGAAA
CATCTCACAAGGAGTTTCCC

Downstream 100 bases:

>100_bases
GGTGGGATTTGCAGCCACCCACTGCGGTTCTGCATGTCGATTCCGCTGAATCGGAAAAAGATGCGTATCAGGGCTGGTCA
AAGCCCGTTTGGGCATGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MHAPLVSKDLDYISTANHDQPPRHLGSRFSAEGEFLPEPGNTVVCHLVEGSQTESAIVSTRQRFLDMPEASQLAFTPVSS
LHMTVFQGVIESRRALPYWPQTLPLDTPIDAVTDYYRDRLSTFPTLPAFNMRVTGLRPVGMVMKGATAEDDSIVALWRDT
FADFFGYRHPDHDTYEFHITLSYIVSWFEPECLPRWQAMLDEELEKLRVAAPVIQMRPPAFCEFKDMNHFKELVVFDKR

Sequences:

>Translated_239_residues
MHAPLVSKDLDYISTANHDQPPRHLGSRFSAEGEFLPEPGNTVVCHLVEGSQTESAIVSTRQRFLDMPEASQLAFTPVSS
LHMTVFQGVIESRRALPYWPQTLPLDTPIDAVTDYYRDRLSTFPTLPAFNMRVTGLRPVGMVMKGATAEDDSIVALWRDT
FADFFGYRHPDHDTYEFHITLSYIVSWFEPECLPRWQAMLDEELEKLRVAAPVIQMRPPAFCEFKDMNHFKELVVFDKR
>Mature_239_residues
MHAPLVSKDLDYISTANHDQPPRHLGSRFSAEGEFLPEPGNTVVCHLVEGSQTESAIVSTRQRFLDMPEASQLAFTPVSS
LHMTVFQGVIESRRALPYWPQTLPLDTPIDAVTDYYRDRLSTFPTLPAFNMRVTGLRPVGMVMKGATAEDDSIVALWRDT
FADFFGYRHPDHDTYEFHITLSYIVSWFEPECLPRWQAMLDEELEKLRVAAPVIQMRPPAFCEFKDMNHFKELVVFDKR

Specific function: Unknown

COG id: COG5255

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27410; Mature: 27410

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHAPLVSKDLDYISTANHDQPPRHLGSRFSAEGEFLPEPGNTVVCHLVEGSQTESAIVST
CCCCCCCCCCHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHH
RQRFLDMPEASQLAFTPVSSLHMTVFQGVIESRRALPYWPQTLPLDTPIDAVTDYYRDRL
HHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH
STFPTLPAFNMRVTGLRPVGMVMKGATAEDDSIVALWRDTFADFFGYRHPDHDTYEFHIT
HHCCCCCCCCEEECCCCHHHHHHCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCEEEEEE
LSYIVSWFEPECLPRWQAMLDEELEKLRVAAPVIQMRPPAFCEFKDMNHFKELVVFDKR
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MHAPLVSKDLDYISTANHDQPPRHLGSRFSAEGEFLPEPGNTVVCHLVEGSQTESAIVST
CCCCCCCCCCHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHH
RQRFLDMPEASQLAFTPVSSLHMTVFQGVIESRRALPYWPQTLPLDTPIDAVTDYYRDRL
HHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH
STFPTLPAFNMRVTGLRPVGMVMKGATAEDDSIVALWRDTFADFFGYRHPDHDTYEFHIT
HHCCCCCCCCEEECCCCHHHHHHCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCEEEEEE
LSYIVSWFEPECLPRWQAMLDEELEKLRVAAPVIQMRPPAFCEFKDMNHFKELVVFDKR
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA