Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15887466
Identifier: 15887466
GI number: 15887466
Start: 116299
End: 117018
Strand: Direct
Name: 15887466
Synonym: Atu0111
Alternate gene names: NA
Gene position: 116299-117018 (Clockwise)
Preceding gene: 159184162
Following gene: 159184163
Centisome position: 4.09
GC content: 55.83
Gene sequence:
>720_bases ATGCACGCCCCGCTCGTTTCGAAAGACCTCGACTATATCTCTACCGCCAACCACGATCAGCCACCACGCCATCTGGGCAG CCGTTTCAGTGCAGAGGGTGAGTTTTTGCCGGAGCCCGGCAATACGGTCGTGTGCCATCTTGTCGAGGGATCGCAGACCG AAAGCGCTATCGTCTCGACCCGTCAGCGTTTCCTTGACATGCCGGAGGCGTCGCAACTCGCCTTCACACCGGTTTCCAGC CTGCATATGACGGTTTTTCAAGGTGTTATCGAGTCGCGCCGGGCTCTGCCCTACTGGCCGCAGACCTTGCCGCTCGATAC GCCGATCGACGCGGTGACGGACTATTATCGTGATCGTCTTTCTACTTTTCCGACACTGCCGGCATTCAACATGCGGGTTA CGGGCCTGCGCCCGGTCGGAATGGTCATGAAGGGAGCGACTGCTGAGGACGATAGCATCGTGGCTCTTTGGCGCGATACA TTCGCCGATTTTTTCGGCTACCGTCATCCCGATCATGACACCTATGAGTTTCATATCACCTTGTCCTACATTGTCAGTTG GTTTGAACCCGAGTGTCTGCCGCGCTGGCAGGCGATGCTCGATGAGGAACTGGAAAAACTGCGCGTCGCAGCGCCTGTTA TACAGATGCGCCCGCCAGCTTTCTGTGAATTCAAGGATATGAACCACTTCAAGGAACTTGTCGTTTTCGATAAGAGGTGA
Upstream 100 bases:
>100_bases GACAATTGGGATGAGGCGCATTGACTGGCCTTTGAGCGGTCGATGTCATTGCTTTGTCGTCTGTGCAGACTAGGGGGAAA CATCTCACAAGGAGTTTCCC
Downstream 100 bases:
>100_bases GGTGGGATTTGCAGCCACCCACTGCGGTTCTGCATGTCGATTCCGCTGAATCGGAAAAAGATGCGTATCAGGGCTGGTCA AAGCCCGTTTGGGCATGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MHAPLVSKDLDYISTANHDQPPRHLGSRFSAEGEFLPEPGNTVVCHLVEGSQTESAIVSTRQRFLDMPEASQLAFTPVSS LHMTVFQGVIESRRALPYWPQTLPLDTPIDAVTDYYRDRLSTFPTLPAFNMRVTGLRPVGMVMKGATAEDDSIVALWRDT FADFFGYRHPDHDTYEFHITLSYIVSWFEPECLPRWQAMLDEELEKLRVAAPVIQMRPPAFCEFKDMNHFKELVVFDKR
Sequences:
>Translated_239_residues MHAPLVSKDLDYISTANHDQPPRHLGSRFSAEGEFLPEPGNTVVCHLVEGSQTESAIVSTRQRFLDMPEASQLAFTPVSS LHMTVFQGVIESRRALPYWPQTLPLDTPIDAVTDYYRDRLSTFPTLPAFNMRVTGLRPVGMVMKGATAEDDSIVALWRDT FADFFGYRHPDHDTYEFHITLSYIVSWFEPECLPRWQAMLDEELEKLRVAAPVIQMRPPAFCEFKDMNHFKELVVFDKR >Mature_239_residues MHAPLVSKDLDYISTANHDQPPRHLGSRFSAEGEFLPEPGNTVVCHLVEGSQTESAIVSTRQRFLDMPEASQLAFTPVSS LHMTVFQGVIESRRALPYWPQTLPLDTPIDAVTDYYRDRLSTFPTLPAFNMRVTGLRPVGMVMKGATAEDDSIVALWRDT FADFFGYRHPDHDTYEFHITLSYIVSWFEPECLPRWQAMLDEELEKLRVAAPVIQMRPPAFCEFKDMNHFKELVVFDKR
Specific function: Unknown
COG id: COG5255
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27410; Mature: 27410
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHAPLVSKDLDYISTANHDQPPRHLGSRFSAEGEFLPEPGNTVVCHLVEGSQTESAIVST CCCCCCCCCCHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHH RQRFLDMPEASQLAFTPVSSLHMTVFQGVIESRRALPYWPQTLPLDTPIDAVTDYYRDRL HHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH STFPTLPAFNMRVTGLRPVGMVMKGATAEDDSIVALWRDTFADFFGYRHPDHDTYEFHIT HHCCCCCCCCEEECCCCHHHHHHCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCEEEEEE LSYIVSWFEPECLPRWQAMLDEELEKLRVAAPVIQMRPPAFCEFKDMNHFKELVVFDKR HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MHAPLVSKDLDYISTANHDQPPRHLGSRFSAEGEFLPEPGNTVVCHLVEGSQTESAIVST CCCCCCCCCCHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHH RQRFLDMPEASQLAFTPVSSLHMTVFQGVIESRRALPYWPQTLPLDTPIDAVTDYYRDRL HHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH STFPTLPAFNMRVTGLRPVGMVMKGATAEDDSIVALWRDTFADFFGYRHPDHDTYEFHIT HHCCCCCCCCEEECCCCHHHHHHCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCEEEEEE LSYIVSWFEPECLPRWQAMLDEELEKLRVAAPVIQMRPPAFCEFKDMNHFKELVVFDKR HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA