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The map label for this gene is ydjH [C]

Identifier: 15887433

GI number: 15887433

Start: 80892

End: 81884

Strand: Reverse

Name: ydjH [C]

Synonym: Atu0079

Alternate gene names: 15887433

Gene position: 81884-80892 (Counterclockwise)

Preceding gene: 159184152

Following gene: 15887430

Centisome position: 2.88

GC content: 59.42

Gene sequence:

>993_bases
ATGACGAAATTCGACGTACTGACTGTCGGCAATGCCATCGTCGACATCATCTCCCGCTGCGATGATCGCTTTCTCAACGA
CAATGCCATCACCAAGGGTGCGATGAACCTGATCGACGCGGAACGCGCCGAACTGCTTTATTCGCTGATGGGACCGGCGC
TCGAAGCCTCCGGCGGCAGCGCGGGCAACACGGCGGCGGGCGTTGCGAATTTCGGCGGCAAGGCCGCTTATTTCGGCAAG
GTGGCCGAAGACCAGCTCGGCGAAATCTTCCAGCACGATATCCGCGCCCAGGGCGTCTATTTCGAAACCAAACCGGAAGG
CACATTCCCGCCGACAGCACGTTCGATGATCTTCGTGACCGAAGACGGCGAACGCTCGATGAATACCTATCTCGGTGCCT
GCGTCGATCTCGGCCCGGAAGACGTAGAAGATGACGTGGTGGCGAAGACCAAGGTCACCTATTTCGAAGGTTACCTGTGG
GATCCGCCGCGTGCCAAGGATGCCATTCGCGAATGCGCCCGCATTGCCCATGAAAACGGCCGCGAAGTCTCCATGACGCT
CTCCGACAGCTTCTGCGTCGGCCGCTACCGCGACGAGTTTCTGGACCTGATGCGGTCTGGCACGGTGGACATCGTCTTCG
CCAACAAGCAGGAAGCGCTTTCGCTTTACGAAACCGAGGATTTTGAGCTGGCGCTGACGAAAATCGCCGCCGATTGCAAG
ATCGCCGCGGTGACGATGAGCGAAGAAGGCGCCGTCATCCTGCGCGGCACGGAACGTGTGAAGGTGGAAGCCTATCCCGT
GCATGACGTGGTCGATACGACGGGTGCGGGCGATCTTTTCGCCGCAGGTTTCCTCTTCGGTTATACGCAGGACCGTTCGC
TTGAAGATTGCGGCAAACTCGGCTGCCTTGCGGCGGCTGCCGTCATTCAGCAGGTCGGACCACGCCCCATGTCATCCCTG
AAGGCGCTGGGCGAAAAACACGGCCTTATTTAA

Upstream 100 bases:

>100_bases
TCGTTGAGAACCGCATATTTTCTCTTTGGGCTTTTCTTGCAGCCAGAAATGTTTAAGACCATTCGAAAAAAGCACACCCC
GTGCGAACCGGATAGGGCCT

Downstream 100 bases:

>100_bases
AGGCTTCGCCGGGGTAAGCGCCCCAGATTTCCCCCTGGGATACCCAGCCCGAGGCCTGACCGGCCTCGGCACGGCACCAG
TCACCATTGCATTCGCCGAT

Product: carbohydrate kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 329

Protein sequence:

>330_residues
MTKFDVLTVGNAIVDIISRCDDRFLNDNAITKGAMNLIDAERAELLYSLMGPALEASGGSAGNTAAGVANFGGKAAYFGK
VAEDQLGEIFQHDIRAQGVYFETKPEGTFPPTARSMIFVTEDGERSMNTYLGACVDLGPEDVEDDVVAKTKVTYFEGYLW
DPPRAKDAIRECARIAHENGREVSMTLSDSFCVGRYRDEFLDLMRSGTVDIVFANKQEALSLYETEDFELALTKIAADCK
IAAVTMSEEGAVILRGTERVKVEAYPVHDVVDTTGAGDLFAAGFLFGYTQDRSLEDCGKLGCLAAAAVIQQVGPRPMSSL
KALGEKHGLI

Sequences:

>Translated_330_residues
MTKFDVLTVGNAIVDIISRCDDRFLNDNAITKGAMNLIDAERAELLYSLMGPALEASGGSAGNTAAGVANFGGKAAYFGK
VAEDQLGEIFQHDIRAQGVYFETKPEGTFPPTARSMIFVTEDGERSMNTYLGACVDLGPEDVEDDVVAKTKVTYFEGYLW
DPPRAKDAIRECARIAHENGREVSMTLSDSFCVGRYRDEFLDLMRSGTVDIVFANKQEALSLYETEDFELALTKIAADCK
IAAVTMSEEGAVILRGTERVKVEAYPVHDVVDTTGAGDLFAAGFLFGYTQDRSLEDCGKLGCLAAAAVIQQVGPRPMSSL
KALGEKHGLI
>Mature_329_residues
TKFDVLTVGNAIVDIISRCDDRFLNDNAITKGAMNLIDAERAELLYSLMGPALEASGGSAGNTAAGVANFGGKAAYFGKV
AEDQLGEIFQHDIRAQGVYFETKPEGTFPPTARSMIFVTEDGERSMNTYLGACVDLGPEDVEDDVVAKTKVTYFEGYLWD
PPRAKDAIRECARIAHENGREVSMTLSDSFCVGRYRDEFLDLMRSGTVDIVFANKQEALSLYETEDFELALTKIAADCKI
AAVTMSEEGAVILRGTERVKVEAYPVHDVVDTTGAGDLFAAGFLFGYTQDRSLEDCGKLGCLAAAAVIQQVGPRPMSSLK
ALGEKHGLI

Specific function: Unknown

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Homo sapiens, GI32484975, Length=333, Percent_Identity=26.1261261261261, Blast_Score=86, Evalue=6e-17,
Organism=Homo sapiens, GI32484973, Length=333, Percent_Identity=26.1261261261261, Blast_Score=85, Evalue=7e-17,
Organism=Homo sapiens, GI5670342, Length=313, Percent_Identity=25.5591054313099, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI4557693, Length=313, Percent_Identity=25.8785942492013, Blast_Score=70, Evalue=2e-12,
Organism=Escherichia coli, GI87081971, Length=317, Percent_Identity=25.5520504731861, Blast_Score=80, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17541820, Length=328, Percent_Identity=23.1707317073171, Blast_Score=74, Evalue=7e-14,
Organism=Saccharomyces cerevisiae, GI6322565, Length=331, Percent_Identity=25.9818731117825, Blast_Score=90, Evalue=4e-19,
Organism=Drosophila melanogaster, GI21355521, Length=349, Percent_Identity=25.214899713467, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI21356339, Length=336, Percent_Identity=27.0833333333333, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24663633, Length=336, Percent_Identity=27.0833333333333, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI28571668, Length=351, Percent_Identity=23.3618233618234, Blast_Score=75, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: NA

Molecular weight: Translated: 35678; Mature: 35546

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKFDVLTVGNAIVDIISRCDDRFLNDNAITKGAMNLIDAERAELLYSLMGPALEASGGS
CCCEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCC
AGNTAAGVANFGGKAAYFGKVAEDQLGEIFQHDIRAQGVYFETKPEGTFPPTARSMIFVT
CCCCCCCHHCCCCCCHHHCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEE
EDGERSMNTYLGACVDLGPEDVEDDVVAKTKVTYFEGYLWDPPRAKDAIRECARIAHENG
CCCCHHHHHHHHHHHCCCCCCCCCCHHHHEEEEEEECEECCCCCHHHHHHHHHHHHHCCC
REVSMTLSDSFCVGRYRDEFLDLMRSGTVDIVFANKQEALSLYETEDFELALTKIAADCK
CEEEEEECCCEEHHHHHHHHHHHHHCCCEEEEECCHHHHHHHCCCCCHHHHHHHHHCCCE
IAAVTMSEEGAVILRGTERVKVEAYPVHDVVDTTGAGDLFAAGFLFGYTQDRSLEDCGKL
EEEEEECCCCEEEEECCCEEEEEEECCHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHH
GCLAAAAVIQQVGPRPMSSLKALGEKHGLI
HHHHHHHHHHHCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
TKFDVLTVGNAIVDIISRCDDRFLNDNAITKGAMNLIDAERAELLYSLMGPALEASGGS
CCEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCC
AGNTAAGVANFGGKAAYFGKVAEDQLGEIFQHDIRAQGVYFETKPEGTFPPTARSMIFVT
CCCCCCCHHCCCCCCHHHCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEE
EDGERSMNTYLGACVDLGPEDVEDDVVAKTKVTYFEGYLWDPPRAKDAIRECARIAHENG
CCCCHHHHHHHHHHHCCCCCCCCCCHHHHEEEEEEECEECCCCCHHHHHHHHHHHHHCCC
REVSMTLSDSFCVGRYRDEFLDLMRSGTVDIVFANKQEALSLYETEDFELALTKIAADCK
CEEEEEECCCEEHHHHHHHHHHHHHCCCEEEEECCHHHHHHHCCCCCHHHHHHHHHCCCE
IAAVTMSEEGAVILRGTERVKVEAYPVHDVVDTTGAGDLFAAGFLFGYTQDRSLEDCGKL
EEEEEECCCCEEEEECCCEEEEEEECCHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHH
GCLAAAAVIQQVGPRPMSSLKALGEKHGLI
HHHHHHHHHHHCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]