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The map label for this gene is frcR [H]

Identifier: 15887416

GI number: 15887416

Start: 65054

End: 66286

Strand: Reverse

Name: frcR [H]

Synonym: Atu0062

Alternate gene names: 15887416

Gene position: 66286-65054 (Counterclockwise)

Preceding gene: 15887425

Following gene: 159184143

Centisome position: 2.33

GC content: 57.42

Gene sequence:

>1233_bases
ATGAGACAATCTGTCGAGACGGCGCCGCAAGCGCCGCCCACTACCATGGATATGAGCGGCGGTGCCAACCAGATCGGGGT
GCGCGCTTATAACGAGCGGCTCGTGCTGTCCCTCGTTCGCCGTCATGGCGGGCTGTCAAAAGCCGAAATATCAAGACTTT
GCGGCCTTTCGGCGCAGACCGTTTCCGTCATCATGCGTTCGCTTGAAAAGGATGGTCTTCTCATTCGTGGCGAAAGACTG
CGCGGCAAGGTGGGCCAGCCATCGACGCCGATGCGCCTTAATCCCGATGCCGTATTTTCTTTTGGCGTCAAGATCGGCCG
TCGCAGTGTCGATCTCGTGCTGATGGATTTCGTCGGGCGCATCAGGCTCAAGCTCCGCAAGACCTATCCCTACCCCATGC
CGGAGTGGATATTGCCCTTTGTCATAGAGGGCATATCCGAGCTCGAATCAAAACTCTCTGCGGTCGAGCGGCAAAAAATT
GCCGGTGTCGGCATCGCCGCCCCGTTCGAATTGTGGAACTGGGCCCAGGAAGTGGGCGCCCCGCAAGCCGAAATGGAACG
GTGGCGGGACGTCGATATCCGCTCAGAAATTGCCAATGGCATCAGTTACCCGGTCTTTCTACAAAATGACGCCACAAGCG
CTTGCGGTGCCGAACTGGTTTTCGGCGCGGGCCAGAACTATGCGGATTTTCTTTACGTCTTCATCGGCTCCTTCATCGGC
GGTGGTGTGGTCTTGAATTCAGCACTGTTTTCCGGAAAGACGGGCACCGCCGGCGCGATCGGTCCATTGCCGGTACAAGG
GCAGGATGGCAATACGGTTCAATTGCTGAAAATCGCCTCGATCTTCGTTCTGGAAAACATGCTGCGCGAAAGGGGCATTG
ATCCCCGTCCCCTATGGTTCTCCCCGGACGAGTGGATCGACTTCGGCGAACCGCTGGAAAACTGGATTCAAAAAACCGCC
GCCGCGCTGGCCCAGGCTGTTATTGCCGCGGCCTCCATTATAGATTTTTCCAGCGTCATCATCGATGGTGGCTTTCCCGA
CTGGGTTCGGACAAGAATCGTTTCCGCCACCCGGCTTGCCCTGAAGCATCACGATCTTCAGGGTGTCACGCTGCCGGAGA
TCGTCGAAGGTGCGGTTGGCAGCCAGGCTCGGGCAATCGGCGGTGCAAGCCTTCCGCTGTTTTCGCGTTATCTCATCGAT
CAGAACGTTCTGTTCAAGGATACGACGGGCTGA

Upstream 100 bases:

>100_bases
AGGAGGAATATCGCCGCGTCGTTTAACGTTGCGATAGCAAGATTGCCATAAAGCCCCCTGTATCGGTCACGGCGGATATG
GCGGGCGGGAGGATGACATT

Downstream 100 bases:

>100_bases
GAGCCTTTACCGGGTTCCTTACCCGGCTCTTTTTTGGCTCATCTGGCGATTATTCACCAGCAGCGTGCTGCATTATCGTG
TCAAGAAAGGCGGGACCGTA

Product: ROK family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 410

Protein sequence:

>410_residues
MRQSVETAPQAPPTTMDMSGGANQIGVRAYNERLVLSLVRRHGGLSKAEISRLCGLSAQTVSVIMRSLEKDGLLIRGERL
RGKVGQPSTPMRLNPDAVFSFGVKIGRRSVDLVLMDFVGRIRLKLRKTYPYPMPEWILPFVIEGISELESKLSAVERQKI
AGVGIAAPFELWNWAQEVGAPQAEMERWRDVDIRSEIANGISYPVFLQNDATSACGAELVFGAGQNYADFLYVFIGSFIG
GGVVLNSALFSGKTGTAGAIGPLPVQGQDGNTVQLLKIASIFVLENMLRERGIDPRPLWFSPDEWIDFGEPLENWIQKTA
AALAQAVIAAASIIDFSSVIIDGGFPDWVRTRIVSATRLALKHHDLQGVTLPEIVEGAVGSQARAIGGASLPLFSRYLID
QNVLFKDTTG

Sequences:

>Translated_410_residues
MRQSVETAPQAPPTTMDMSGGANQIGVRAYNERLVLSLVRRHGGLSKAEISRLCGLSAQTVSVIMRSLEKDGLLIRGERL
RGKVGQPSTPMRLNPDAVFSFGVKIGRRSVDLVLMDFVGRIRLKLRKTYPYPMPEWILPFVIEGISELESKLSAVERQKI
AGVGIAAPFELWNWAQEVGAPQAEMERWRDVDIRSEIANGISYPVFLQNDATSACGAELVFGAGQNYADFLYVFIGSFIG
GGVVLNSALFSGKTGTAGAIGPLPVQGQDGNTVQLLKIASIFVLENMLRERGIDPRPLWFSPDEWIDFGEPLENWIQKTA
AALAQAVIAAASIIDFSSVIIDGGFPDWVRTRIVSATRLALKHHDLQGVTLPEIVEGAVGSQARAIGGASLPLFSRYLID
QNVLFKDTTG
>Mature_410_residues
MRQSVETAPQAPPTTMDMSGGANQIGVRAYNERLVLSLVRRHGGLSKAEISRLCGLSAQTVSVIMRSLEKDGLLIRGERL
RGKVGQPSTPMRLNPDAVFSFGVKIGRRSVDLVLMDFVGRIRLKLRKTYPYPMPEWILPFVIEGISELESKLSAVERQKI
AGVGIAAPFELWNWAQEVGAPQAEMERWRDVDIRSEIANGISYPVFLQNDATSACGAELVFGAGQNYADFLYVFIGSFIG
GGVVLNSALFSGKTGTAGAIGPLPVQGQDGNTVQLLKIASIFVLENMLRERGIDPRPLWFSPDEWIDFGEPLENWIQKTA
AALAQAVIAAASIIDFSSVIIDGGFPDWVRTRIVSATRLALKHHDLQGVTLPEIVEGAVGSQARAIGGASLPLFSRYLID
QNVLFKDTTG

Specific function: Transcriptional repressor of xylose-utilizing enzymes [H]

COG id: COG1940

COG function: function code KG; Transcriptional regulator/sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ROK (nagC/xylR) family [H]

Homologues:

Organism=Escherichia coli, GI1786891, Length=257, Percent_Identity=23.7354085603113, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000600
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00480 ROK [H]

EC number: NA

Molecular weight: Translated: 44595; Mature: 44595

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQSVETAPQAPPTTMDMSGGANQIGVRAYNERLVLSLVRRHGGLSKAEISRLCGLSAQT
CCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHH
VSVIMRSLEKDGLLIRGERLRGKVGQPSTPMRLNPDAVFSFGVKIGRRSVDLVLMDFVGR
HHHHHHHHHHCCEEEECHHHCCCCCCCCCCCEECHHHHHHHHHHHCCCHHHHHHHHHHHH
IRLKLRKTYPYPMPEWILPFVIEGISELESKLSAVERQKIAGVGIAAPFELWNWAQEVGA
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
PQAEMERWRDVDIRSEIANGISYPVFLQNDATSACGAELVFGAGQNYADFLYVFIGSFIG
CHHHHHHHCCCCHHHHHHCCCCCCEEEECCCCCCCCCHHEECCCCCHHHHHHHHHHHHHC
GGVVLNSALFSGKTGTAGAIGPLPVQGQDGNTVQLLKIASIFVLENMLRERGIDPRPLWF
CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCC
SPDEWIDFGEPLENWIQKTAAALAQAVIAAASIIDFSSVIIDGGFPDWVRTRIVSATRLA
CCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHH
LKHHDLQGVTLPEIVEGAVGSQARAIGGASLPLFSRYLIDQNVLFKDTTG
HHHCCCCCCCHHHHHHHHCCCCHHHCCCCCCHHHHHHHHCCCEEEECCCC
>Mature Secondary Structure
MRQSVETAPQAPPTTMDMSGGANQIGVRAYNERLVLSLVRRHGGLSKAEISRLCGLSAQT
CCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHH
VSVIMRSLEKDGLLIRGERLRGKVGQPSTPMRLNPDAVFSFGVKIGRRSVDLVLMDFVGR
HHHHHHHHHHCCEEEECHHHCCCCCCCCCCCEECHHHHHHHHHHHCCCHHHHHHHHHHHH
IRLKLRKTYPYPMPEWILPFVIEGISELESKLSAVERQKIAGVGIAAPFELWNWAQEVGA
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
PQAEMERWRDVDIRSEIANGISYPVFLQNDATSACGAELVFGAGQNYADFLYVFIGSFIG
CHHHHHHHCCCCHHHHHHCCCCCCEEEECCCCCCCCCHHEECCCCCHHHHHHHHHHHHHC
GGVVLNSALFSGKTGTAGAIGPLPVQGQDGNTVQLLKIASIFVLENMLRERGIDPRPLWF
CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCC
SPDEWIDFGEPLENWIQKTAAALAQAVIAAASIIDFSSVIIDGGFPDWVRTRIVSATRLA
CCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHH
LKHHDLQGVTLPEIVEGAVGSQARAIGGASLPLFSRYLIDQNVLFKDTTG
HHHCCCCCCCHHHHHHHHCCCCHHHCCCCCCHHHHHHHHCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2544559 [H]