Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is yjeE [H]

Identifier: 15887385

GI number: 15887385

Start: 27520

End: 29031

Strand: Reverse

Name: yjeE [H]

Synonym: Atu0026

Alternate gene names: 15887385

Gene position: 29031-27520 (Counterclockwise)

Preceding gene: 15887386

Following gene: 159184129

Centisome position: 1.02

GC content: 58.2

Gene sequence:

>1512_bases
ATGAGCGAAGACATTTTGCCGATCACCATTTCGCTGGCGGGAGAAAAGGACACCATAAGGCTCGGTGAAGACCTTGCCCT
GGCCCTGAAACCCGGCGATTGCCTGACGCTGATCGGCGATCTCGGCGCTGGCAAATCAACGCTCGCCCGCGCCTTCATCC
GGGCGATGGCGGATGAGCCCGATCTTGAGGTTCCAAGCCCCACCTTCACCATCATCCAGACCTATACGACCCGCATCCCC
GTCGCCCATCTCGATCTCTACCGGCTTTCGGATGTTTCCGAGCTAGATGAACTCGGCATTGACGAGATGCTGGAGGACGG
TATCTGCCTGATCGAGTGGCCCGACATCGCCGCTGAGGTTTTGCCTCCGGCCCAGACGATCACCCTGCAGCTAACACATT
CGGGTGAAGGTCGCGTGGCCGTGATAGAGGCGCCGGCACAACAGAAAGCGCGGCTCGACCGTGTTTTCGCCATTCGTGAA
TTCCTGGCGAAAAACGGCAGAGGCGATGCGACTCGCCGTTTCCTGAGTGGTGATGCCTCGACACGCGCCTATGAAACGAT
CTCGACCGATGGCCCCGACCTTATTTTGATGGATTGGCGGCGCCCCATGAGGGGAGCGATCGTTGCGGACGGCAAAACTT
ACGCGGAAATCGTCCATCTTGCCCAGGATGCGCGCTCCTTCGTGGCGATCGGCGATTATCTGCGAAACAGCGGTTTCCGT
GCGCCGGAGATTCTGGCCGCGGATATCGATCAGGGCATTCTTCTTCTGGAGGATCTCGGACGGGAGGGTGTACTTGCTGC
AGATGGCACACCGATAGAAGAACGTTATCTTCAAAGTGTCGCCTGTCTCGCCACCCTTCACCAGACACCGCGCCCGGCGT
TGCTGCCGATGCGTGATGGCAGCACCTACGACATTCCTTCCTTCGACCGGCAGGCGATGAAGATCGAAGTATCGCTGCTG
GTGGAATGGTATCTGCCCCACAAGCGCGGCAAAGCGCTCACCGATGGCGAGAAGCAGGATTATTACGCCATTTGGGACGG
CCTGATCGATGCGCTCGCCGGCTGCGAAACGGGACTTCTGCTGCGTGACTTCCATTCGCCGAATATTCTCTGGCAGGCGC
AGAATAGCGGCATCGGCCAAGTTGGCCTAATCGATTTTCAGGATGCGATGATTGGCCCCACCGCCTATGATCTCGCTTCC
ATCGTGCAGGATGCGCGGGTCACCATCCCCCCCGAACTACAAACACGCCTCATGTCGCATTATCTCAACAGCAGAAAAGC
GACGCCCGCTTTCGATGAGGCCGCATTCCTCAAGGCTTTCGCCATCATGTCGGCGCAGCGCAACTGCAAGCTTGCTGGTA
TCTGGGTGAGGCTGTTGGAACGGGACAAGAAACCCGGTTATATGAAACATATGCCGCGGACGTTCCGTTATCTCGCTGAC
GCGCTTTCGCATCCCGAACTCGCGCCACTCCGGGAATGGTGTGTCCGTATGGGCATGGACTTTAACGACTAA

Upstream 100 bases:

>100_bases
TGCATCATGGCACCGTCAGCATCGACAGCCGGCCCGGCAACGGCACCATCGTCACCTGCCGCATTCCCTCCGCCACACTG
CCGCACTCCATCGCCGCAGA

Downstream 100 bases:

>100_bases
CACGGTTGACCACGATGACGATCAAAAACGCGATGGTGCTGGCCGCCGGGCTTGGCACGCGCATGCGCCCGATCACGGAT
ACGATCCCGAAGCCGCTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 503; Mature: 502

Protein sequence:

>503_residues
MSEDILPITISLAGEKDTIRLGEDLALALKPGDCLTLIGDLGAGKSTLARAFIRAMADEPDLEVPSPTFTIIQTYTTRIP
VAHLDLYRLSDVSELDELGIDEMLEDGICLIEWPDIAAEVLPPAQTITLQLTHSGEGRVAVIEAPAQQKARLDRVFAIRE
FLAKNGRGDATRRFLSGDASTRAYETISTDGPDLILMDWRRPMRGAIVADGKTYAEIVHLAQDARSFVAIGDYLRNSGFR
APEILAADIDQGILLLEDLGREGVLAADGTPIEERYLQSVACLATLHQTPRPALLPMRDGSTYDIPSFDRQAMKIEVSLL
VEWYLPHKRGKALTDGEKQDYYAIWDGLIDALAGCETGLLLRDFHSPNILWQAQNSGIGQVGLIDFQDAMIGPTAYDLAS
IVQDARVTIPPELQTRLMSHYLNSRKATPAFDEAAFLKAFAIMSAQRNCKLAGIWVRLLERDKKPGYMKHMPRTFRYLAD
ALSHPELAPLREWCVRMGMDFND

Sequences:

>Translated_503_residues
MSEDILPITISLAGEKDTIRLGEDLALALKPGDCLTLIGDLGAGKSTLARAFIRAMADEPDLEVPSPTFTIIQTYTTRIP
VAHLDLYRLSDVSELDELGIDEMLEDGICLIEWPDIAAEVLPPAQTITLQLTHSGEGRVAVIEAPAQQKARLDRVFAIRE
FLAKNGRGDATRRFLSGDASTRAYETISTDGPDLILMDWRRPMRGAIVADGKTYAEIVHLAQDARSFVAIGDYLRNSGFR
APEILAADIDQGILLLEDLGREGVLAADGTPIEERYLQSVACLATLHQTPRPALLPMRDGSTYDIPSFDRQAMKIEVSLL
VEWYLPHKRGKALTDGEKQDYYAIWDGLIDALAGCETGLLLRDFHSPNILWQAQNSGIGQVGLIDFQDAMIGPTAYDLAS
IVQDARVTIPPELQTRLMSHYLNSRKATPAFDEAAFLKAFAIMSAQRNCKLAGIWVRLLERDKKPGYMKHMPRTFRYLAD
ALSHPELAPLREWCVRMGMDFND
>Mature_502_residues
SEDILPITISLAGEKDTIRLGEDLALALKPGDCLTLIGDLGAGKSTLARAFIRAMADEPDLEVPSPTFTIIQTYTTRIPV
AHLDLYRLSDVSELDELGIDEMLEDGICLIEWPDIAAEVLPPAQTITLQLTHSGEGRVAVIEAPAQQKARLDRVFAIREF
LAKNGRGDATRRFLSGDASTRAYETISTDGPDLILMDWRRPMRGAIVADGKTYAEIVHLAQDARSFVAIGDYLRNSGFRA
PEILAADIDQGILLLEDLGREGVLAADGTPIEERYLQSVACLATLHQTPRPALLPMRDGSTYDIPSFDRQAMKIEVSLLV
EWYLPHKRGKALTDGEKQDYYAIWDGLIDALAGCETGLLLRDFHSPNILWQAQNSGIGQVGLIDFQDAMIGPTAYDLASI
VQDARVTIPPELQTRLMSHYLNSRKATPAFDEAAFLKAFAIMSAQRNCKLAGIWVRLLERDKKPGYMKHMPRTFRYLADA
LSHPELAPLREWCVRMGMDFND

Specific function: Unknown

COG id: COG3178

COG function: function code R; Predicted phosphotransferase related to Ser/Thr protein kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0079 family [H]

Homologues:

Organism=Escherichia coli, GI1790610, Length=138, Percent_Identity=39.8550724637681, Blast_Score=96, Evalue=6e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003442 [H]

Pfam domain/function: PF02367 UPF0079 [H]

EC number: NA

Molecular weight: Translated: 55722; Mature: 55590

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEDILPITISLAGEKDTIRLGEDLALALKPGDCLTLIGDLGAGKSTLARAFIRAMADEP
CCCCEEEEEEEECCCCCEEEECCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHCCCC
DLEVPSPTFTIIQTYTTRIPVAHLDLYRLSDVSELDELGIDEMLEDGICLIEWPDIAAEV
CCCCCCCCEEEEEEHHCCCCCHHHHHHHHCCHHHHHHCCHHHHHHCCEEEEECCCHHHHH
LPPAQTITLQLTHSGEGRVAVIEAPAQQKARLDRVFAIREFLAKNGRGDATRRFLSGDAS
CCCCEEEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCC
TRAYETISTDGPDLILMDWRRPMRGAIVADGKTYAEIVHLAQDARSFVAIGDYLRNSGFR
CCEEEEECCCCCCEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
APEILAADIDQGILLLEDLGREGVLAADGTPIEERYLQSVACLATLHQTPRPALLPMRDG
CCHHHHHCCCCCEEEHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCC
STYDIPSFDRQAMKIEVSLLVEWYLPHKRGKALTDGEKQDYYAIWDGLIDALAGCETGLL
CCCCCCCCCCHHEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCE
LRDFHSPNILWQAQNSGIGQVGLIDFQDAMIGPTAYDLASIVQDARVTIPPELQTRLMSH
EEECCCCCEEEEECCCCCCEEEEEECCHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
YLNSRKATPAFDEAAFLKAFAIMSAQRNCKLAGIWVRLLERDKKPGYMKHMPRTFRYLAD
HHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHCHHHHHHHHH
ALSHPELAPLREWCVRMGMDFND
HHCCCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SEDILPITISLAGEKDTIRLGEDLALALKPGDCLTLIGDLGAGKSTLARAFIRAMADEP
CCCEEEEEEEECCCCCEEEECCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHCCCC
DLEVPSPTFTIIQTYTTRIPVAHLDLYRLSDVSELDELGIDEMLEDGICLIEWPDIAAEV
CCCCCCCCEEEEEEHHCCCCCHHHHHHHHCCHHHHHHCCHHHHHHCCEEEEECCCHHHHH
LPPAQTITLQLTHSGEGRVAVIEAPAQQKARLDRVFAIREFLAKNGRGDATRRFLSGDAS
CCCCEEEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCC
TRAYETISTDGPDLILMDWRRPMRGAIVADGKTYAEIVHLAQDARSFVAIGDYLRNSGFR
CCEEEEECCCCCCEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
APEILAADIDQGILLLEDLGREGVLAADGTPIEERYLQSVACLATLHQTPRPALLPMRDG
CCHHHHHCCCCCEEEHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCC
STYDIPSFDRQAMKIEVSLLVEWYLPHKRGKALTDGEKQDYYAIWDGLIDALAGCETGLL
CCCCCCCCCCHHEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCE
LRDFHSPNILWQAQNSGIGQVGLIDFQDAMIGPTAYDLASIVQDARVTIPPELQTRLMSH
EEECCCCCEEEEECCCCCCEEEEEECCHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
YLNSRKATPAFDEAAFLKAFAIMSAQRNCKLAGIWVRLLERDKKPGYMKHMPRTFRYLAD
HHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHCHHHHHHHHH
ALSHPELAPLREWCVRMGMDFND
HHCCCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]