Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15887372
Identifier: 15887372
GI number: 15887372
Start: 10604
End: 11206
Strand: Reverse
Name: 15887372
Synonym: Atu0013
Alternate gene names: NA
Gene position: 11206-10604 (Counterclockwise)
Preceding gene: 159184127
Following gene: 15887366
Centisome position: 0.39
GC content: 57.38
Gene sequence:
>603_bases GTGACGAACAGCAATAACAGGCAATCTGAATATCCCGTCGATCCCCTCTTCCTCGACCGCTGGTCTCCGCGCGCCTTCGA TGGCAGCCCTATGCCGAAAGAGCATTTGTTGACCATTCTCGACGCGGCCCACTGGGCGCCATCCGCTTCCAACCATCAAC CGTGGCGTTTCGTTTATGCCCATAAGGACAGCGAAGACTGGCCACTCTTCGTGGAACTGTTGATGGAGGGAAACCAGAAG TGGGCGAAGAACGCCTCCGTGCTGCTTTTCGTCATCTCCCGCGACCACACCATTTCGCACGAAGGCGAGAAGAAGCCATC CGCCACTCACTCCTTCGATGCCGGCGCAGCCTGGTTCTCGCTCGCCATGCAAGCTCATCTACTTGGCTATCATGCGCATG GGATGGGCGGTATCTTCAAAGACCGGATCGTCGAAAAGCTTGATATACCTGATGGCTTCAAGGTGGAGGCCGGGGTTGCG ATCGGGACGTTGACGGATAAATCCATTCTTCCCGATGATCTGGCGGAGCGCGAGGTGCCCAGCAAGCGCGTACCTCTGGC AGATGTCGCTTTCGAAGGCCGCTTCACCGGCAAGGCCGATTAA
Upstream 100 bases:
>100_bases TGATGCATATATGAACGATGCATTCATACTTGTCACCCCTTGACTGCGCCAAGTTTCGAAAAATACCTTTTCCTTCCCGG CAATCAAAAGGACATCGCCC
Downstream 100 bases:
>100_bases TCACGCCCGACACCATCAAACAAAAGGCCCGGCGGAAATTCACCGCCGGGCCTTTTGTTAAATTTTCGTTTCACGTGAAT CGTTACGCGAAACACCCCAC
Product: NAD(P)H-flavin oxidoreductase
Products: NA
Alternate protein names: Nitroreductase Family Protein; NAD(P)H-Flavin Oxidoreductase; Oxidoreductase; Oxidoreductase Protein; Bacterioferritin Comigratory Protein/NADH Dehydrogenase; Oxygen-Insensitive Nitroreductase; NADH Dehydrogenase/NAD(P)H Nitroreductase
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MTNSNNRQSEYPVDPLFLDRWSPRAFDGSPMPKEHLLTILDAAHWAPSASNHQPWRFVYAHKDSEDWPLFVELLMEGNQK WAKNASVLLFVISRDHTISHEGEKKPSATHSFDAGAAWFSLAMQAHLLGYHAHGMGGIFKDRIVEKLDIPDGFKVEAGVA IGTLTDKSILPDDLAEREVPSKRVPLADVAFEGRFTGKAD
Sequences:
>Translated_200_residues MTNSNNRQSEYPVDPLFLDRWSPRAFDGSPMPKEHLLTILDAAHWAPSASNHQPWRFVYAHKDSEDWPLFVELLMEGNQK WAKNASVLLFVISRDHTISHEGEKKPSATHSFDAGAAWFSLAMQAHLLGYHAHGMGGIFKDRIVEKLDIPDGFKVEAGVA IGTLTDKSILPDDLAEREVPSKRVPLADVAFEGRFTGKAD >Mature_199_residues TNSNNRQSEYPVDPLFLDRWSPRAFDGSPMPKEHLLTILDAAHWAPSASNHQPWRFVYAHKDSEDWPLFVELLMEGNQKW AKNASVLLFVISRDHTISHEGEKKPSATHSFDAGAAWFSLAMQAHLLGYHAHGMGGIFKDRIVEKLDIPDGFKVEAGVAI GTLTDKSILPDDLAEREVPSKRVPLADVAFEGRFTGKAD
Specific function: Unknown
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22346; Mature: 22215
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNSNNRQSEYPVDPLFLDRWSPRAFDGSPMPKEHLLTILDAAHWAPSASNHQPWRFVYA CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEE HKDSEDWPLFVELLMEGNQKWAKNASVLLFVISRDHTISHEGEKKPSATHSFDAGAAWFS ECCCCCCHHHHHHHHHCCHHHCCCCEEEEEEEECCCEECCCCCCCCCCCCCCCCHHHHHH LAMQAHLLGYHAHGMGGIFKDRIVEKLDIPDGFKVEAGVAIGTLTDKSILPDDLAEREVP HHHHHHHHHEECCCCCCHHHHHHHHHCCCCCCCEEECCEEEEECCCCCCCCCHHHHHCCC SKRVPLADVAFEGRFTGKAD CCCCCHHHEEECCCCCCCCC >Mature Secondary Structure TNSNNRQSEYPVDPLFLDRWSPRAFDGSPMPKEHLLTILDAAHWAPSASNHQPWRFVYA CCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEE HKDSEDWPLFVELLMEGNQKWAKNASVLLFVISRDHTISHEGEKKPSATHSFDAGAAWFS ECCCCCCHHHHHHHHHCCHHHCCCCEEEEEEEECCCEECCCCCCCCCCCCCCCCHHHHHH LAMQAHLLGYHAHGMGGIFKDRIVEKLDIPDGFKVEAGVAIGTLTDKSILPDDLAEREVP HHHHHHHHHEECCCCCCHHHHHHHHHCCCCCCCEEECCEEEEECCCCCCCCCHHHHHCCC SKRVPLADVAFEGRFTGKAD CCCCCHHHEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA