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The map label for this gene is ydiA [C]

Identifier: 15887360

GI number: 15887360

Start: 203

End: 1024

Strand: Direct

Name: ydiA [C]

Synonym: Atu0001

Alternate gene names: 15887360

Gene position: 203-1024 (Clockwise)

Preceding gene: NA

Following gene: 159184119

Centisome position: 0.01

GC content: 57.91

Gene sequence:

>822_bases
GTGGAGAACAAAAAAAGCTTCTTCCATCTGCACCTGATTTCGGACTCGACGGGAGAGACTCTGATGTCGGCCGGCCGCGC
CGTCTCGGCGCAGTTTCATACATCCATGCCGGTGGAACATGTCTATCCGATGATCCGCAACCAGAAGCAGCTCGCGCAGG
TCATCGATCTCATCGACAAGGAGCCCGGCATTGTTCTTTATACAATCGTTGATCAGCAGCTGGCGGAATTCCTGGATCTG
CGCTGCCATGCGATTGGCGTGCCCTGCGTCAACGTTCTCGAACCGATCATCGGCATTTTCCAGACCTATCTCGGCGCGCC
GTCCAGGCGGCGGGTGGGTGCGCAACACGCGCTGAATGCCGATTATTTCGCGCGGATCGAAGCACTCAATTTCGCCATGG
ACCATGATGACGGGCAGATGCCGGAGACCTATGACGATGCGGATGTCGTCATCATCGGCATCAGCCGCACGTCGAAAACA
CCAACCAGCATCTATCTTGCTAACAGGGGCATAAAGACTGCCAATATCCCGGTCGTTCCCAATGTGCCTTTGCCCGAAAG
CCTATATGCCGCGACCCGGCCGTTGATCGTCGGTCTCGTCGCGACATCGGATCGCATATCGCAGGTTCGTGAGAACAGGG
ATCTGGGTACAACCGGCGGATTTGACGGTGGCCGTTACACGGATCGCGCCACCATCATGGAAGAGCTGAAATATGCGCGT
GCGCTCTGCGCCCGCAACAATTGGCCGCTGATCGACGTCACACGCCGTTCCATCGAGGAAACGGCCGCGGCGATCCTTGC
CCTGCGCCCGAGGACGCGATAA

Upstream 100 bases:

>100_bases
TGCGGATTGTGGAAAAACACCACCTTATTCACCCCGCGGCTCGGCCCGTCGGACAATTCAGAGATTTGTCCCGGTTTATC
AACAGGGGGAGAAAAACAGC

Downstream 100 bases:

>100_bases
TCCGAATCGCATCATCAGGAGCAGACAGTCGATGAAACAAGAGTTGATCCTCGCCTCATCCAGCGCATCCCGGCAGATGC
TGATGCGCAATGCGGGGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MENKKSFFHLHLISDSTGETLMSAGRAVSAQFHTSMPVEHVYPMIRNQKQLAQVIDLIDKEPGIVLYTIVDQQLAEFLDL
RCHAIGVPCVNVLEPIIGIFQTYLGAPSRRRVGAQHALNADYFARIEALNFAMDHDDGQMPETYDDADVVIIGISRTSKT
PTSIYLANRGIKTANIPVVPNVPLPESLYAATRPLIVGLVATSDRISQVRENRDLGTTGGFDGGRYTDRATIMEELKYAR
ALCARNNWPLIDVTRRSIEETAAAILALRPRTR

Sequences:

>Translated_273_residues
MENKKSFFHLHLISDSTGETLMSAGRAVSAQFHTSMPVEHVYPMIRNQKQLAQVIDLIDKEPGIVLYTIVDQQLAEFLDL
RCHAIGVPCVNVLEPIIGIFQTYLGAPSRRRVGAQHALNADYFARIEALNFAMDHDDGQMPETYDDADVVIIGISRTSKT
PTSIYLANRGIKTANIPVVPNVPLPESLYAATRPLIVGLVATSDRISQVRENRDLGTTGGFDGGRYTDRATIMEELKYAR
ALCARNNWPLIDVTRRSIEETAAAILALRPRTR
>Mature_273_residues
MENKKSFFHLHLISDSTGETLMSAGRAVSAQFHTSMPVEHVYPMIRNQKQLAQVIDLIDKEPGIVLYTIVDQQLAEFLDL
RCHAIGVPCVNVLEPIIGIFQTYLGAPSRRRVGAQHALNADYFARIEALNFAMDHDDGQMPETYDDADVVIIGISRTSKT
PTSIYLANRGIKTANIPVVPNVPLPESLYAATRPLIVGLVATSDRISQVRENRDLGTTGGFDGGRYTDRATIMEELKYAR
ALCARNNWPLIDVTRRSIEETAAAILALRPRTR

Specific function: Unknown

COG id: COG1806

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pyruvate, phosphate dikinase regulatory protein family

Homologues:

Organism=Escherichia coli, GI1787995, Length=283, Percent_Identity=30.7420494699647, Blast_Score=100, Evalue=8e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y001_AGRT5 (Q8UJC7)

Other databases:

- EMBL:   AE007869
- PIR:   A97359
- PIR:   AB2577
- RefSeq:   NP_353041.1
- STRING:   Q8UJC7
- GeneID:   1132039
- GenomeReviews:   AE007869_GR
- KEGG:   atu:Atu0001
- eggNOG:   COG1806
- HOGENOM:   HBG304855
- OMA:   AMEFAVM
- PhylomeDB:   Q8UJC7
- ProtClustDB:   PRK05339
- BioCyc:   ATUM176299-1:ATU0001-MONOMER
- HAMAP:   MF_01062
- InterPro:   IPR005177

Pfam domain/function: PF03618 DUF299

EC number: NA

Molecular weight: Translated: 30303; Mature: 30303

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENKKSFFHLHLISDSTGETLMSAGRAVSAQFHTSMPVEHVYPMIRNQKQLAQVIDLIDK
CCCCCCEEEEEEECCCCCHHHHHCCCCEEEHHHCCCCHHHHHHHHCCHHHHHHHHHHHCC
EPGIVLYTIVDQQLAEFLDLRCHAIGVPCVNVLEPIIGIFQTYLGAPSRRRVGAQHALNA
CCCEEEEEEHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHCCCCHHHCCHHHHCCH
DYFARIEALNFAMDHDDGQMPETYDDADVVIIGISRTSKTPTSIYLANRGIKTANIPVVP
HHHHHHHHHHHEECCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCC
NVPLPESLYAATRPLIVGLVATSDRISQVRENRDLGTTGGFDGGRYTDRATIMEELKYAR
CCCCCHHHHHHHCCCEEEEEECHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
ALCARNNWPLIDVTRRSIEETAAAILALRPRTR
HHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MENKKSFFHLHLISDSTGETLMSAGRAVSAQFHTSMPVEHVYPMIRNQKQLAQVIDLIDK
CCCCCCEEEEEEECCCCCHHHHHCCCCEEEHHHCCCCHHHHHHHHCCHHHHHHHHHHHCC
EPGIVLYTIVDQQLAEFLDLRCHAIGVPCVNVLEPIIGIFQTYLGAPSRRRVGAQHALNA
CCCEEEEEEHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHCCCCHHHCCHHHHCCH
DYFARIEALNFAMDHDDGQMPETYDDADVVIIGISRTSKTPTSIYLANRGIKTANIPVVP
HHHHHHHHHHHEECCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCC
NVPLPESLYAATRPLIVGLVATSDRISQVRENRDLGTTGGFDGGRYTDRATIMEELKYAR
CCCCCHHHHHHHCCCEEEEEECHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
ALCARNNWPLIDVTRRSIEETAAAILALRPRTR
HHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194