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The map label for this gene is trpH [H]

Identifier: 239618499

GI number: 239618499

Start: 2269312

End: 2270151

Strand: Reverse

Name: trpH [H]

Synonym: Kole_2140

Alternate gene names: 239618499

Gene position: 2270151-2269312 (Counterclockwise)

Preceding gene: 239618503

Following gene: 239618498

Centisome position: 98.61

GC content: 40.95

Gene sequence:

>840_bases
ATGTTAATAGACCTGCATGTACATAGCACAGCGTCAGACGGAACATGTACCCCGGAAGAATTATTGGAAGAAGCGGCCGA
TAAGGGGATTGAAGTTCTTGCCATTACAGATCACGATACAATAAATGGGGTTAAAGAGCTTCCGAATGTTTTCAAAGATG
TCATTGTGATAAAAGGTGTTGAGATAAGTGCCGAATTTAACGGAGTACTCCACATACTCGGTTATGGTGTGGACCCAAAC
AACGAAAGGATAGATCAGACATTAACCGAGCTTCAGGATTACAGGCTTAAAAGAAACCTTATAATGATAGAAAAAATGAA
ATCCCACGGCTTCGATATAACCCTTGAAGAACTAAAAGAAGTCGGGAATGATGATTTAATCGGCCGTCCTCACTTCGCTT
CCCTTATGATCAAGAAAGGCTATGTTGATTCCTACGACGAAGCTTTCGAAAAATATCTCAAAAAGGGTGCTCTTTTTTAC
GTGGACAAAAAGCGGCTTTCTCCAAAAGAATCTATAGAAATGATTCTTGAAGCTGATGGGATCCCCGTGATAGCTCATCC
GTATCAAACAGGGTTACCGGACGAAGAGTTTGAGGGGCTAATCAAAGAACTGAAAGGACATGGCCTTGCTGGTATCGAGG
TTTTTTATCCTTATCACACCGATGAAAAGATCGAGTTTTATTTGAACATCGCGAAAAAATATGAACTTGTTGTCACTGCC
GGAAGCGATTATCATGGGTATAACGAGCTCAAACTCAATGGAGAAACGGACGTTCCGTTTGAATTGGGAATGTACGTACC
ATATAGATTTGTCTCAGATTTCCTTTGCAGGGTACTTTAA

Upstream 100 bases:

>100_bases
TCTTCCTTTTGAAACGAAGTAGATTTATCCGGTTATTTCAAGCAAGTCAAATCTGTTGTATCATTAATTAAATACACGCA
GAAAGAGGTGAGATATATAT

Downstream 100 bases:

>100_bases
AATACAATAAGTGTCTCTGCTTGGCTTTCTTCAGAATAATAGAGTGGTGTAAGATTGTAATGTAGCTCGAAAAAATGGTC
TGATGTAATAGCAGACCGTT

Product: PHP domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MLIDLHVHSTASDGTCTPEELLEEAADKGIEVLAITDHDTINGVKELPNVFKDVIVIKGVEISAEFNGVLHILGYGVDPN
NERIDQTLTELQDYRLKRNLIMIEKMKSHGFDITLEELKEVGNDDLIGRPHFASLMIKKGYVDSYDEAFEKYLKKGALFY
VDKKRLSPKESIEMILEADGIPVIAHPYQTGLPDEEFEGLIKELKGHGLAGIEVFYPYHTDEKIEFYLNIAKKYELVVTA
GSDYHGYNELKLNGETDVPFELGMYVPYRFVSDFLCRVL

Sequences:

>Translated_279_residues
MLIDLHVHSTASDGTCTPEELLEEAADKGIEVLAITDHDTINGVKELPNVFKDVIVIKGVEISAEFNGVLHILGYGVDPN
NERIDQTLTELQDYRLKRNLIMIEKMKSHGFDITLEELKEVGNDDLIGRPHFASLMIKKGYVDSYDEAFEKYLKKGALFY
VDKKRLSPKESIEMILEADGIPVIAHPYQTGLPDEEFEGLIKELKGHGLAGIEVFYPYHTDEKIEFYLNIAKKYELVVTA
GSDYHGYNELKLNGETDVPFELGMYVPYRFVSDFLCRVL
>Mature_279_residues
MLIDLHVHSTASDGTCTPEELLEEAADKGIEVLAITDHDTINGVKELPNVFKDVIVIKGVEISAEFNGVLHILGYGVDPN
NERIDQTLTELQDYRLKRNLIMIEKMKSHGFDITLEELKEVGNDDLIGRPHFASLMIKKGYVDSYDEAFEKYLKKGALFY
VDKKRLSPKESIEMILEADGIPVIAHPYQTGLPDEEFEGLIKELKGHGLAGIEVFYPYHTDEKIEFYLNIAKKYELVVTA
GSDYHGYNELKLNGETDVPFELGMYVPYRFVSDFLCRVL

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpH family [H]

Homologues:

Organism=Escherichia coli, GI1787520, Length=250, Percent_Identity=28.4, Blast_Score=118, Evalue=4e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 31638; Mature: 31638

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIDLHVHSTASDGTCTPEELLEEAADKGIEVLAITDHDTINGVKELPNVFKDVIVIKGV
CEEEEEEECCCCCCCCCHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHEEECE
EISAEFNGVLHILGYGVDPNNERIDQTLTELQDYRLKRNLIMIEKMKSHGFDITLEELKE
EEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEHHHCCCCEEHHHHHH
VGNDDLIGRPHFASLMIKKGYVDSYDEAFEKYLKKGALFYVDKKRLSPKESIEMILEADG
CCCCCCCCCCHHHHHEEECCCCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHEECCC
IPVIAHPYQTGLPDEEFEGLIKELKGHGLAGIEVFYPYHTDEKIEFYLNIAKKYELVVTA
CCEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEEEEECEEEEEEEE
GSDYHGYNELKLNGETDVPFELGMYVPYRFVSDFLCRVL
CCCCCCCCEEEECCCCCCCEEECCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MLIDLHVHSTASDGTCTPEELLEEAADKGIEVLAITDHDTINGVKELPNVFKDVIVIKGV
CEEEEEEECCCCCCCCCHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHEEECE
EISAEFNGVLHILGYGVDPNNERIDQTLTELQDYRLKRNLIMIEKMKSHGFDITLEELKE
EEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEHHHCCCCEEHHHHHH
VGNDDLIGRPHFASLMIKKGYVDSYDEAFEKYLKKGALFYVDKKRLSPKESIEMILEADG
CCCCCCCCCCHHHHHEEECCCCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHEECCC
IPVIAHPYQTGLPDEEFEGLIKELKGHGLAGIEVFYPYHTDEKIEFYLNIAKKYELVVTA
CCEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEEEEECEEEEEEEE
GSDYHGYNELKLNGETDVPFELGMYVPYRFVSDFLCRVL
CCCCCCCCEEEECCCCCCCEEECCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]