| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
Click here to switch to the map view.
The map label for this gene is 239618480
Identifier: 239618480
GI number: 239618480
Start: 2254347
End: 2254598
Strand: Reverse
Name: 239618480
Synonym: Kole_2121
Alternate gene names: NA
Gene position: 2254598-2254347 (Counterclockwise)
Preceding gene: 239618487
Following gene: 239618479
Centisome position: 97.94
GC content: 39.29
Gene sequence:
>252_bases ATGATGGAAAGAATAGTGAACATAGGGTTTGACTCCTTTGTGGTAACCGATAGGATTATGGCTGTTTTGCCGGCGCAAAA TTCAGTAGTTAAAAGGCTAAAGCAGATGAGTGTTGAAATCGGAAGGACGATAAATCTGACTTTTGGAAAGTGTACCAGGT CCGTGATTATAACGGACAGTGGCCATTTGATATTCTCATTTGTTCCGGTTGAGAAACTTATCGAAAAACTTTTTGATGGC GAAGAAAGATAA
Upstream 100 bases:
>100_bases TTTTCCCGTGTCTACTAAACTCTCGCCTGTGGGTATCATGGTACACCTCCGCATTCTTCTCATATGTTATAATAACACTG TTAAGCAAAAGGAGGAAGTG
Downstream 100 bases:
>100_bases GACAGGAGGGCAAATAACCGTGGACTTTAAAATGATGCCTGTTGTACCTTATGTTGTTGAAAACAAAGGCAGAGGTGAAA GGATATACGACATATTCACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 83; Mature: 83
Protein sequence:
>83_residues MMERIVNIGFDSFVVTDRIMAVLPAQNSVVKRLKQMSVEIGRTINLTFGKCTRSVIITDSGHLIFSFVPVEKLIEKLFDG EER
Sequences:
>Translated_83_residues MMERIVNIGFDSFVVTDRIMAVLPAQNSVVKRLKQMSVEIGRTINLTFGKCTRSVIITDSGHLIFSFVPVEKLIEKLFDG EER >Mature_83_residues MMERIVNIGFDSFVVTDRIMAVLPAQNSVVKRLKQMSVEIGRTINLTFGKCTRSVIITDSGHLIFSFVPVEKLIEKLFDG EER
Specific function: Unknown
COG id: COG2052
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0296 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007169 - ProDom: PD063023 [H]
Pfam domain/function: PF04025 DUF370 [H]
EC number: NA
Molecular weight: Translated: 9416; Mature: 9416
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMERIVNIGFDSFVVTDRIMAVLPAQNSVVKRLKQMSVEIGRTINLTFGKCTRSVIITDS CCCHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECC GHLIFSFVPVEKLIEKLFDGEER CCEEEEEECHHHHHHHHCCCCCC >Mature Secondary Structure MMERIVNIGFDSFVVTDRIMAVLPAQNSVVKRLKQMSVEIGRTINLTFGKCTRSVIITDS CCCHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECC GHLIFSFVPVEKLIEKLFDGEER CCEEEEEECHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA