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The map label for this gene is nuoC [H]

Identifier: 239618413

GI number: 239618413

Start: 2183505

End: 2184020

Strand: Reverse

Name: nuoC [H]

Synonym: Kole_2053

Alternate gene names: 239618413

Gene position: 2184020-2183505 (Counterclockwise)

Preceding gene: 239618414

Following gene: 239618412

Centisome position: 94.87

GC content: 38.37

Gene sequence:

>516_bases
ATGAATTCCATGAATGAACTGATAAAAGAAGTCGAAAACTTATTTGGCACCATAAAATTAAATCAAATCGCTGAAAGAAA
ATACACTGTTGACACTGATCTAAAAGACCTCATTTCTATTCTGGAACTGTTCAAGCTGAAGGGATGGAATCATCTGTCCC
TCATATCCTGTGTGGATTGGATCGATGATAATCAGTTTGAACTGATTTATACACTCTTCAATTGGGAAAATGGCATTACA
TTGATGGTAAGCACAAAGATTTCTAGAGAAACTCCCGTTGCGCCAACGGTGATGGGATTATGGCCAACAGCACGTTTCTA
CGAAAGGGATATTCACGAATTTTTCGGCGTGAAGTTCGATGGAAACGATGACATGAAACCGCTCATACTTGAAAACTGGA
AAGACATCCCACCGATGAGAAAAGATTTCGATCCCCATAAATTCTCAAAGGAAAACTTCCCTGACAGAACATATGATGTT
GATTTTATTCCAGAAGGAAGTGAAAAAGATGGGTAA

Upstream 100 bases:

>100_bases
ATCGATCGTGGCGAAGCCACCGGCTGGAAAACTTATCAGGAAAACTATGAATGGTACAAAAAGAATCAATTAAAAGCCCT
CGGGGAGGTGTACGTGCACG

Downstream 100 bases:

>100_bases
AGAGGTCAAACTTTTTATCGGTCCGAACCACCCTGGAATGCACGGGAATTCCAGCGTACATATCTATGTTGAAGGTGACA
CCGTGGTCAAGGCACGATTA

Product: NADH dehydrogenase (ubiquinone) 30 kDa subunit

Products: NA

Alternate protein names: NADH dehydrogenase I subunit C; NDH-1 subunit C [H]

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MNSMNELIKEVENLFGTIKLNQIAERKYTVDTDLKDLISILELFKLKGWNHLSLISCVDWIDDNQFELIYTLFNWENGIT
LMVSTKISRETPVAPTVMGLWPTARFYERDIHEFFGVKFDGNDDMKPLILENWKDIPPMRKDFDPHKFSKENFPDRTYDV
DFIPEGSEKDG

Sequences:

>Translated_171_residues
MNSMNELIKEVENLFGTIKLNQIAERKYTVDTDLKDLISILELFKLKGWNHLSLISCVDWIDDNQFELIYTLFNWENGIT
LMVSTKISRETPVAPTVMGLWPTARFYERDIHEFFGVKFDGNDDMKPLILENWKDIPPMRKDFDPHKFSKENFPDRTYDV
DFIPEGSEKDG
>Mature_171_residues
MNSMNELIKEVENLFGTIKLNQIAERKYTVDTDLKDLISILELFKLKGWNHLSLISCVDWIDDNQFELIYTLFNWENGIT
LMVSTKISRETPVAPTVMGLWPTARFYERDIHEFFGVKFDGNDDMKPLILENWKDIPPMRKDFDPHKFSKENFPDRTYDV
DFIPEGSEKDG

Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translo

COG id: COG0852

COG function: function code C; NADH:ubiquinone oxidoreductase 27 kD subunit

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I 30 kDa subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010218
- InterPro:   IPR001268
- InterPro:   IPR020396
- ProDom:   PD001581 [H]

Pfam domain/function: PF00329 Complex1_30kDa [H]

EC number: =1.6.99.5 [H]

Molecular weight: Translated: 20116; Mature: 20116

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSMNELIKEVENLFGTIKLNQIAERKYTVDTDLKDLISILELFKLKGWNHLSLISCVDW
CCHHHHHHHHHHHHHCEEHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH
IDDNQFELIYTLFNWENGITLMVSTKISRETPVAPTVMGLWPTARFYERDIHEFFGVKFD
CCCCCEEEEEEEEECCCCEEEEEEECCCCCCCCCCEEECCCCCHHHHHHHHHHHHCEEEC
GNDDMKPLILENWKDIPPMRKDFDPHKFSKENFPDRTYDVDFIPEGSEKDG
CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC
>Mature Secondary Structure
MNSMNELIKEVENLFGTIKLNQIAERKYTVDTDLKDLISILELFKLKGWNHLSLISCVDW
CCHHHHHHHHHHHHHCEEHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH
IDDNQFELIYTLFNWENGITLMVSTKISRETPVAPTVMGLWPTARFYERDIHEFFGVKFD
CCCCCEEEEEEEEECCCCEEEEEEECCCCCCCCCCEEECCCCCHHHHHHHHHHHHCEEEC
GNDDMKPLILENWKDIPPMRKDFDPHKFSKENFPDRTYDVDFIPEGSEKDG
CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA