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The map label for this gene is yabB [H]

Identifier: 239618399

GI number: 239618399

Start: 2166529

End: 2167236

Strand: Direct

Name: yabB [H]

Synonym: Kole_2039

Alternate gene names: 239618399

Gene position: 2166529-2167236 (Clockwise)

Preceding gene: 239618398

Following gene: 239618400

Centisome position: 94.11

GC content: 41.67

Gene sequence:

>708_bases
TTGTTATTTATAATAGTGGTGATAGAAGTGTTCAGAGAATTCGATGACAGTGTTTTCGAAGGGCTTTCCTTTGATTATTC
TTCGAAGGATGCACGTATCAATCATGCAACGGTTTTGCTTGCGTGGTATTGCGTTCTGCCGAAAGCTACAAAGAGAGTAC
TGGAGCTTGGTACTGGTTCCGGGGCTATTTCCATATACCTGGCTAGAAAGTATGATGTAGAGATTACAGCAATAGATGTT
GATGAAGAATTAATAGAGATAGCGCACAAAAACGCAAGAGTGAATAATGTAACGGATAAAGTAAAATTTATGCAGCTATC
CTCTGCCATGGCTGTAGAAAAGTTCTCTGCTGGAAGTTTCGATGTTGTGGTTTCTAATCCTCCTCATTTTGCCCATGAAG
GTATTGAAAGCCCTTCTCAGCGCAGAAATTCATCCAGGCGGCTTACAATTGAAGGGATAAAGGAGTTTGCTCAAGCAACT
GGTAGACTTCTGAAGAGTAGAGGGGCGTTCTTTTTCATTCTTCATCCTAGAGACCTTACCAGATGGTTAAGTGCATTCGA
AATGAACAACCTTGGTGTTCACCGTTTGAGATTTGTGTTTGGCACAGCCAACAAACAATCACAGCTTGTTCTGGTCAAAG
GAAGAAAGAATTCAACTTCCGAGGTGGTGGTAGAACCGCCAATTATTTTGAGAAAAGGGAGGAGCTAG

Upstream 100 bases:

>100_bases
GACAATGAAGTGCCAGCAGTTGTAGAGTCTTTCTCAAGAATAATAGTGGTTAACAGTGAATGTTGTGCTTCAGAAACATC
TGTTGATGATACTTCGGAGA

Downstream 100 bases:

>100_bases
TAGTGTTTATTTCCTTTGAAGGTATAGATGGTTCCGGCAAATCAACCCAGGTAGCCCTCTTTCGTGAATACCTCGAAAGG
AATTCGATGGAGTATGTTTT

Product: Methyltransferase type 11

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MLFIIVVIEVFREFDDSVFEGLSFDYSSKDARINHATVLLAWYCVLPKATKRVLELGTGSGAISIYLARKYDVEITAIDV
DEELIEIAHKNARVNNVTDKVKFMQLSSAMAVEKFSAGSFDVVVSNPPHFAHEGIESPSQRRNSSRRLTIEGIKEFAQAT
GRLLKSRGAFFFILHPRDLTRWLSAFEMNNLGVHRLRFVFGTANKQSQLVLVKGRKNSTSEVVVEPPIILRKGRS

Sequences:

>Translated_235_residues
MLFIIVVIEVFREFDDSVFEGLSFDYSSKDARINHATVLLAWYCVLPKATKRVLELGTGSGAISIYLARKYDVEITAIDV
DEELIEIAHKNARVNNVTDKVKFMQLSSAMAVEKFSAGSFDVVVSNPPHFAHEGIESPSQRRNSSRRLTIEGIKEFAQAT
GRLLKSRGAFFFILHPRDLTRWLSAFEMNNLGVHRLRFVFGTANKQSQLVLVKGRKNSTSEVVVEPPIILRKGRS
>Mature_235_residues
MLFIIVVIEVFREFDDSVFEGLSFDYSSKDARINHATVLLAWYCVLPKATKRVLELGTGSGAISIYLARKYDVEITAIDV
DEELIEIAHKNARVNNVTDKVKFMQLSSAMAVEKFSAGSFDVVVSNPPHFAHEGIESPSQRRNSSRRLTIEGIKEFAQAT
GRLLKSRGAFFFILHPRDLTRWLSAFEMNNLGVHRLRFVFGTANKQSQLVLVKGRKNSTSEVVVEPPIILRKGRS

Specific function: Unknown

COG id: COG4123

COG function: function code R; Predicted O-methyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS [H]

EC number: NA

Molecular weight: Translated: 26461; Mature: 26461

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFIIVVIEVFREFDDSVFEGLSFDYSSKDARINHATVLLAWYCVLPKATKRVLELGTGS
CEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCC
GAISIYLARKYDVEITAIDVDEELIEIAHKNARVNNVTDKVKFMQLSSAMAVEKFSAGSF
CEEEEEEEEEECEEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCE
DVVVSNPPHFAHEGIESPSQRRNSSRRLTIEGIKEFAQATGRLLKSRGAFFFILHPRDLT
EEEECCCCCHHHHCCCCCHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCEEEEECCHHHH
RWLSAFEMNNLGVHRLRFVFGTANKQSQLVLVKGRKNSTSEVVVEPPIILRKGRS
HHHHHHHCCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCEEEECCCEEEECCCC
>Mature Secondary Structure
MLFIIVVIEVFREFDDSVFEGLSFDYSSKDARINHATVLLAWYCVLPKATKRVLELGTGS
CEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCC
GAISIYLARKYDVEITAIDVDEELIEIAHKNARVNNVTDKVKFMQLSSAMAVEKFSAGSF
CEEEEEEEEEECEEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCE
DVVVSNPPHFAHEGIESPSQRRNSSRRLTIEGIKEFAQATGRLLKSRGAFFFILHPRDLT
EEEECCCCCHHHHCCCCCHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCEEEEECCHHHH
RWLSAFEMNNLGVHRLRFVFGTANKQSQLVLVKGRKNSTSEVVVEPPIILRKGRS
HHHHHHHCCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCEEEECCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]