| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is yngK [H]
Identifier: 239618357
GI number: 239618357
Start: 2117825
End: 2118919
Strand: Direct
Name: yngK [H]
Synonym: Kole_1995
Alternate gene names: 239618357
Gene position: 2117825-2118919 (Clockwise)
Preceding gene: 239618356
Following gene: 239618358
Centisome position: 91.99
GC content: 40.37
Gene sequence:
>1095_bases GTGGTACGAAGGGTTAGCGTTGTCATTATCCTAATTTTTGTGACTGTATTGATAGCTTACCCTGTCGGGATTTGGGTGGT TAGAGATCAAATTGTTTCACCTGAGAAGATAGAGAATGTTATTAAAATAGCCAAAGAGGTTGGAGCAACAAGACTGTATG TACAGGTAGTTTGGCGAGCAGATGCTTATTATGAATCCGATATTCTTCCACGAGCAGAAGCGCTTGAAGGTCAACCAAAG GACTTCGATCCTCTTGCTTATGTATTGAAATTAGCCAGGTCTGAAAACTTAAAAATATCCGCATGGATAAACGCATGTTA TGCATGGAATTTTGTCACGAGGCCAAAATCTCCAGAACATGTTATTAATAAACATCCTGAATGGGTAACCTACGATCAAA ACGGTGTTTCAATGCTTAATTATACCGGTTCAGAGTCGTTAGATGTCCCTGGCATTTTTCTTGAGCCGGGTCTTCCGGAA GTTAGAGATTTCATCGCGAGCATTGCTGAAGAAATTGCAAGCAAATACGATGTTGACGAGATTCATCTGGATTATATAAG GTATCCATTTAGAACCTTCGGTTACCATCCAGAGGTTCAGAAAGCTTACAGAAAATGGCTTATACGTGCATTAAAAGAAA AGAGAGTAAAAAATCTTGCCAGTGCTTTTGATGACTACCGTCGAGAGCAAGTTTCTTTGCTGGTGAAAGAGATTTATGAC AGGGTAACCAGCCATGGGAAACGCCTTTCTGCTGCCGTGCTTGCGTATTATGAGCAAGATGCTTATGAACAACGATTTCA GGCTTGGCTTGAATGGTTAAAAGGTGGTTATCTCGATTATGCTGTGATGATGGCATATGATCCGTATCCGGAAACAGTTA AGCATTATGTACTCTATGCCCTCGATAGACTGGGAAATCTTGAAAATGTACGAATCGGTCTTGGTGCGTACAAAGTTGTG GAAGAACCGCAAAAATTAAGGGATTTGGTGGATAGTGTTTTATATCTGAATCCAGATGAAATTGTTATTTTTTCGATCGC AAGTCTTATGGAAAGTAAGGAGATGCAAAAAATTGTGCGGGGTATCTCCCGTTAA
Upstream 100 bases:
>100_bases CAATATGGTTTACAGATGGCTGGAGCTGCTATATCTGCTATACCAATGATTGTGGTGTTTTTCGCTTTCCAGAGGTATTT TATGAAGGGACTGATGACCG
Downstream 100 bases:
>100_bases AATTTGGGTTCAAAAAGGAGGGGTACATCATGAGAAAGCTGCTTGTTAGTGTTGTTATGGTCATGTTGCTTGTAGTGAGC GTTGTGGCTTTTGCCGATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MVRRVSVVIILIFVTVLIAYPVGIWVVRDQIVSPEKIENVIKIAKEVGATRLYVQVVWRADAYYESDILPRAEALEGQPK DFDPLAYVLKLARSENLKISAWINACYAWNFVTRPKSPEHVINKHPEWVTYDQNGVSMLNYTGSESLDVPGIFLEPGLPE VRDFIASIAEEIASKYDVDEIHLDYIRYPFRTFGYHPEVQKAYRKWLIRALKEKRVKNLASAFDDYRREQVSLLVKEIYD RVTSHGKRLSAAVLAYYEQDAYEQRFQAWLEWLKGGYLDYAVMMAYDPYPETVKHYVLYALDRLGNLENVRIGLGAYKVV EEPQKLRDLVDSVLYLNPDEIVIFSIASLMESKEMQKIVRGISR
Sequences:
>Translated_364_residues MVRRVSVVIILIFVTVLIAYPVGIWVVRDQIVSPEKIENVIKIAKEVGATRLYVQVVWRADAYYESDILPRAEALEGQPK DFDPLAYVLKLARSENLKISAWINACYAWNFVTRPKSPEHVINKHPEWVTYDQNGVSMLNYTGSESLDVPGIFLEPGLPE VRDFIASIAEEIASKYDVDEIHLDYIRYPFRTFGYHPEVQKAYRKWLIRALKEKRVKNLASAFDDYRREQVSLLVKEIYD RVTSHGKRLSAAVLAYYEQDAYEQRFQAWLEWLKGGYLDYAVMMAYDPYPETVKHYVLYALDRLGNLENVRIGLGAYKVV EEPQKLRDLVDSVLYLNPDEIVIFSIASLMESKEMQKIVRGISR >Mature_364_residues MVRRVSVVIILIFVTVLIAYPVGIWVVRDQIVSPEKIENVIKIAKEVGATRLYVQVVWRADAYYESDILPRAEALEGQPK DFDPLAYVLKLARSENLKISAWINACYAWNFVTRPKSPEHVINKHPEWVTYDQNGVSMLNYTGSESLDVPGIFLEPGLPE VRDFIASIAEEIASKYDVDEIHLDYIRYPFRTFGYHPEVQKAYRKWLIRALKEKRVKNLASAFDDYRREQVSLLVKEIYD RVTSHGKRLSAAVLAYYEQDAYEQRFQAWLEWLKGGYLDYAVMMAYDPYPETVKHYVLYALDRLGNLENVRIGLGAYKVV EEPQKLRDLVDSVLYLNPDEIVIFSIASLMESKEMQKIVRGISR
Specific function: Unknown
COG id: COG1649
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Attached to the membrane by a lipid anchor (Potential) [C]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0748 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003790 - InterPro: IPR017853 [H]
Pfam domain/function: PF02638 DUF187 [H]
EC number: NA
Molecular weight: Translated: 42217; Mature: 42217
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRRVSVVIILIFVTVLIAYPVGIWVVRDQIVSPEKIENVIKIAKEVGATRLYVQVVWRA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEHHEEEHH DAYYESDILPRAEALEGQPKDFDPLAYVLKLARSENLKISAWINACYAWNFVTRPKSPEH CCHHCCCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHEEECCCCCCCHH VINKHPEWVTYDQNGVSMLNYTGSESLDVPGIFLEPGLPEVRDFIASIAEEIASKYDVDE HHCCCCCEEEECCCCCEEEEECCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCHHH IHLDYIRYPFRTFGYHPEVQKAYRKWLIRALKEKRVKNLASAFDDYRREQVSLLVKEIYD HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVTSHGKRLSAAVLAYYEQDAYEQRFQAWLEWLKGGYLDYAVMMAYDPYPETVKHYVLYA HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEEEECCCHHHHHHHHHHH LDRLGNLENVRIGLGAYKVVEEPQKLRDLVDSVLYLNPDEIVIFSIASLMESKEMQKIVR HHHHCCCCEEEECCCHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH GISR HHCC >Mature Secondary Structure MVRRVSVVIILIFVTVLIAYPVGIWVVRDQIVSPEKIENVIKIAKEVGATRLYVQVVWRA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEHHEEEHH DAYYESDILPRAEALEGQPKDFDPLAYVLKLARSENLKISAWINACYAWNFVTRPKSPEH CCHHCCCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHEEECCCCCCCHH VINKHPEWVTYDQNGVSMLNYTGSESLDVPGIFLEPGLPEVRDFIASIAEEIASKYDVDE HHCCCCCEEEECCCCCEEEEECCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCHHH IHLDYIRYPFRTFGYHPEVQKAYRKWLIRALKEKRVKNLASAFDDYRREQVSLLVKEIYD HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVTSHGKRLSAAVLAYYEQDAYEQRFQAWLEWLKGGYLDYAVMMAYDPYPETVKHYVLYA HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEEEECCCHHHHHHHHHHH LDRLGNLENVRIGLGAYKVVEEPQKLRDLVDSVLYLNPDEIVIFSIASLMESKEMQKIVR HHHHCCCCEEEECCCHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH GISR HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9387222; 9384377 [H]