| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is gpmB [H]
Identifier: 239618294
GI number: 239618294
Start: 2050912
End: 2051553
Strand: Reverse
Name: gpmB [H]
Synonym: Kole_1931
Alternate gene names: 239618294
Gene position: 2051553-2050912 (Counterclockwise)
Preceding gene: 239618295
Following gene: 239618293
Centisome position: 89.12
GC content: 42.37
Gene sequence:
>642_bases ATGAGAGTTTACATAGTCAGACATGGCTCAACAGAATGGAATCTTACCGGGAAATGGCAGGGAAGCTCTGACGTTCCTCT AAGCGCTATCGGTATAAGAGACGCCACCCTGACAGCAAATTTTCTGGCAGACAAGGTTGAATCGATAGAAGCCATATATT CCAGCGATCTTTCCAGAGCAGCAGAAACCGCGGAGATAATTGGTGAACGCTTCGGAAAACCCCCTATAAAAATGAAGGAA CTGAGAGAATGTAGAATGGATCTCTGGAGCGGACTGAAGATTGAAGAGATACTTGAAAAATATGGTAAAGAATTTCAGGA ATGGCGAACAAATCCTGATGCTGAGATCCCGGACACAGAATCGCTAAATCAGGTACAGAAAAGAGCTGTTCGGGCTTTCA AGACAATTACTTCTTCTTTGTCTGACGAAAGCAATATAATCATCGTTTCTCATGCATTGTGGATAAGGCTGCTTCTCTGC AGGGTTCTTAACATACCTATCCAACAACACAGAAAATTCAATCTCTGGAATTGTTCTGTTACCATATTAGATTACGATTC GCGCTTTGGCTGGGTAGTTGATACCCTCAACTACTATTTCCACCTCGAAGTGGATACTAAAAAAGCCATCGAAAACAGGT AA
Upstream 100 bases:
>100_bases AAAAAAACACACTCATCATTGACACAGGCAAAAAAATAAAACTACATGGTATGAAAACCAGAGATTTTGAAGTTGATGAA ATAGTCATTGGAGGTGAATC
Downstream 100 bases:
>100_bases CATGAAGCTTCACGTTCATTTTATACCATACGAAGAAATCACCGCGCCTGTTGCGGTAGTCATCGACGTTTTAAGGGCAA CCAGCAGTATTGCTGTTGCT
Product: Phosphoglycerate mutase
Products: NA
Alternate protein names: PGAM; Phosphoglyceromutase [H]
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MRVYIVRHGSTEWNLTGKWQGSSDVPLSAIGIRDATLTANFLADKVESIEAIYSSDLSRAAETAEIIGERFGKPPIKMKE LRECRMDLWSGLKIEEILEKYGKEFQEWRTNPDAEIPDTESLNQVQKRAVRAFKTITSSLSDESNIIIVSHALWIRLLLC RVLNIPIQQHRKFNLWNCSVTILDYDSRFGWVVDTLNYYFHLEVDTKKAIENR
Sequences:
>Translated_213_residues MRVYIVRHGSTEWNLTGKWQGSSDVPLSAIGIRDATLTANFLADKVESIEAIYSSDLSRAAETAEIIGERFGKPPIKMKE LRECRMDLWSGLKIEEILEKYGKEFQEWRTNPDAEIPDTESLNQVQKRAVRAFKTITSSLSDESNIIIVSHALWIRLLLC RVLNIPIQQHRKFNLWNCSVTILDYDSRFGWVVDTLNYYFHLEVDTKKAIENR >Mature_213_residues MRVYIVRHGSTEWNLTGKWQGSSDVPLSAIGIRDATLTANFLADKVESIEAIYSSDLSRAAETAEIIGERFGKPPIKMKE LRECRMDLWSGLKIEEILEKYGKEFQEWRTNPDAEIPDTESLNQVQKRAVRAFKTITSSLSDESNIIIVSHALWIRLLLC RVLNIPIQQHRKFNLWNCSVTILDYDSRFGWVVDTLNYYFHLEVDTKKAIENR
Specific function: Unknown
COG id: COG0406
COG function: function code G; Fructose-2,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. GpmB subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790856, Length=213, Percent_Identity=33.8028169014084, Blast_Score=104, Evalue=4e-24, Organism=Escherichia coli, GI1786857, Length=190, Percent_Identity=24.7368421052632, Blast_Score=71, Evalue=6e-14, Organism=Saccharomyces cerevisiae, GI6324857, Length=190, Percent_Identity=28.9473684210526, Blast_Score=67, Evalue=1e-12, Organism=Drosophila melanogaster, GI28571815, Length=224, Percent_Identity=25, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI28571817, Length=224, Percent_Identity=25, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI24648979, Length=224, Percent_Identity=25, Blast_Score=73, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR023086 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 24636; Mature: 24636
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVYIVRHGSTEWNLTGKWQGSSDVPLSAIGIRDATLTANFLADKVESIEAIYSSDLSRA CEEEEEECCCCCEEEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AETAEIIGERFGKPPIKMKELRECRMDLWSGLKIEEILEKYGKEFQEWRTNPDAEIPDTE HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCH SLNQVQKRAVRAFKTITSSLSDESNIIIVSHALWIRLLLCRVLNIPIQQHRKFNLWNCSV HHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHCCCHHHCCCCCEEEEEE TILDYDSRFGWVVDTLNYYFHLEVDTKKAIENR EEEECCCCCCHHEEEEEEEEEEEECHHHHCCCC >Mature Secondary Structure MRVYIVRHGSTEWNLTGKWQGSSDVPLSAIGIRDATLTANFLADKVESIEAIYSSDLSRA CEEEEEECCCCCEEEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AETAEIIGERFGKPPIKMKELRECRMDLWSGLKIEEILEKYGKEFQEWRTNPDAEIPDTE HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCH SLNQVQKRAVRAFKTITSSLSDESNIIIVSHALWIRLLLCRVLNIPIQQHRKFNLWNCSV HHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHCCCHHHCCCCCEEEEEE TILDYDSRFGWVVDTLNYYFHLEVDTKKAIENR EEEECCCCCCHHEEEEEEEEEEEECHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA