| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is yfbR [C]
Identifier: 239618289
GI number: 239618289
Start: 2047029
End: 2048159
Strand: Direct
Name: yfbR [C]
Synonym: Kole_1926
Alternate gene names: 239618289
Gene position: 2047029-2048159 (Clockwise)
Preceding gene: 239618232
Following gene: 239618300
Centisome position: 88.92
GC content: 41.11
Gene sequence:
>1131_bases ATGTATCAGTGGATAGTAAAACTATTAGAACTTTCGACCAACTTATTTACAATGTATCGCTGGAACAATCTACCAACGAT AATGAGAACCAACGAGGCCCAGAATGCCTTCATTTCTGCTCAGTTCTCCCTTCTGATGTCAGAACTCGCCAACCTTGGCG GTGAAAAAATCAACGAACAAAACCTTTTAAAAAGGATTCTTTTAAAAGAACTTCCTAAATGTGTGCTCTCGGATATTTCT GTGGATACGAAAGTTCTTATAAAGGAATTTGCTCCAGAAAAATGGGACGCTGTTTTCAGCACCGCTGTTGAAGAGGTCGT TTCTATTTTACCAGAAAAAACAAAAAAAGATTTTTCAGAGACAATTCTGAACGCCAGGGACGAATCTCCTGAAGGCAGGA TAATCACCGTGGCAGATTTGTTATCTGCAAAGCTCGAAGCGGAGATTCACTCGCGTTTCTTCCCTGAATTTTATGAAGAA CCTTTGAGAAGGCTAAAAGAAACACTGAAAGAATTCAATGATTTCCAGCCGTATAAGGCATTGGTAAACAGTGACTGGTT CGAGAATTATAGACGTGCGTTGATTGTGTTACTGAGTGCTGTTAGGTGGAACAGGCTCAACAGAAACGTGAAAACAACCG TTGCGGGACATTCTTTCTATGTGGCAATTTCAGGTTTTCTGCTTGCTTACACGGAGAACCAGAACGGAAATTCGGTGGAC CTGGTTGAGGTGGTTAAAAGGACGTTGTTTCATGATATTCCTGAAAGTGTTACCGGCGACATCATAACTCCAACGAAGAA AAAAGTTCCAGGATTTGAGGAAGTTATATCCAGGGTTGAGGAACATATGGTTAATCAAAGGATCTTTGATTCAATGGATT CTGAACTTGTGAAAAAACTAAAGCCCAGAATATTAGATCCTTTTGCTGGAAAAGAGGGAGAAATGGTAAGATCAGCGGAT CTGCTGGCAGCCATTGTGGAATGCCTTATGGAAATTGAAACCGGAAACAACCAGCCTGCTTTCAGAAGTGCACTGAACTC CATGTTGGATCAATTGGCTAAATCAGAGTTCTCCAGCGTCAGATTTGTTTCTGAAGATTTTAAATGGGGCCTCAGATGGA TGGGAAGATGA
Upstream 100 bases:
>100_bases CACAAACATATTCTCGCCTCTTTTCCTTTATATTTCTTTGATATGATACAATAATCCAGTAGCGGGGTTCAAGGAAAAAA CGGAAGGAAGGGTTAAAAAC
Downstream 100 bases:
>100_bases ACAAATAGGTTTAATATTTATCTATCAGATTTTTTCAAAAAACCTTCGAACCTATCCAGCCCTTTTTTCAGTGTTTCAAT TGAGCTCGCATAAGAAAGCC
Product: hydrolase of HD superfamily-like protein
Products: NA
Alternate protein names: 5-Nucleotidase YfbR; Hydrolase Of HD Superfamily-Like Protein; Hydrolase; HD Domain Protein; Cytoplasmic HAD Superfamily Hydrolase
Number of amino acids: Translated: 376; Mature: 376
Protein sequence:
>376_residues MYQWIVKLLELSTNLFTMYRWNNLPTIMRTNEAQNAFISAQFSLLMSELANLGGEKINEQNLLKRILLKELPKCVLSDIS VDTKVLIKEFAPEKWDAVFSTAVEEVVSILPEKTKKDFSETILNARDESPEGRIITVADLLSAKLEAEIHSRFFPEFYEE PLRRLKETLKEFNDFQPYKALVNSDWFENYRRALIVLLSAVRWNRLNRNVKTTVAGHSFYVAISGFLLAYTENQNGNSVD LVEVVKRTLFHDIPESVTGDIITPTKKKVPGFEEVISRVEEHMVNQRIFDSMDSELVKKLKPRILDPFAGKEGEMVRSAD LLAAIVECLMEIETGNNQPAFRSALNSMLDQLAKSEFSSVRFVSEDFKWGLRWMGR
Sequences:
>Translated_376_residues MYQWIVKLLELSTNLFTMYRWNNLPTIMRTNEAQNAFISAQFSLLMSELANLGGEKINEQNLLKRILLKELPKCVLSDIS VDTKVLIKEFAPEKWDAVFSTAVEEVVSILPEKTKKDFSETILNARDESPEGRIITVADLLSAKLEAEIHSRFFPEFYEE PLRRLKETLKEFNDFQPYKALVNSDWFENYRRALIVLLSAVRWNRLNRNVKTTVAGHSFYVAISGFLLAYTENQNGNSVD LVEVVKRTLFHDIPESVTGDIITPTKKKVPGFEEVISRVEEHMVNQRIFDSMDSELVKKLKPRILDPFAGKEGEMVRSAD LLAAIVECLMEIETGNNQPAFRSALNSMLDQLAKSEFSSVRFVSEDFKWGLRWMGR >Mature_376_residues MYQWIVKLLELSTNLFTMYRWNNLPTIMRTNEAQNAFISAQFSLLMSELANLGGEKINEQNLLKRILLKELPKCVLSDIS VDTKVLIKEFAPEKWDAVFSTAVEEVVSILPEKTKKDFSETILNARDESPEGRIITVADLLSAKLEAEIHSRFFPEFYEE PLRRLKETLKEFNDFQPYKALVNSDWFENYRRALIVLLSAVRWNRLNRNVKTTVAGHSFYVAISGFLLAYTENQNGNSVD LVEVVKRTLFHDIPESVTGDIITPTKKKVPGFEEVISRVEEHMVNQRIFDSMDSELVKKLKPRILDPFAGKEGEMVRSAD LLAAIVECLMEIETGNNQPAFRSALNSMLDQLAKSEFSSVRFVSEDFKWGLRWMGR
Specific function: Unknown
COG id: COG1896
COG function: function code R; Predicted hydrolases of HD superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788628, Length=140, Percent_Identity=32.1428571428571, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43230; Mature: 43230
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYQWIVKLLELSTNLFTMYRWNNLPTIMRTNEAQNAFISAQFSLLMSELANLGGEKINEQ CHHHHHHHHHHHHHHEEEEEECCCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHH NLLKRILLKELPKCVLSDISVDTKVLIKEFAPEKWDAVFSTAVEEVVSILPEKTKKDFSE HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH TILNARDESPEGRIITVADLLSAKLEAEIHSRFFPEFYEEPLRRLKETLKEFNDFQPYKA HHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHH LVNSDWFENYRRALIVLLSAVRWNRLNRNVKTTVAGHSFYVAISGFLLAYTENQNGNSVD HHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCHHHHHHHCCCEEEEECCCCCCHH LVEVVKRTLFHDIPESVTGDIITPTKKKVPGFEEVISRVEEHMVNQRIFDSMDSELVKKL HHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KPRILDPFAGKEGEMVRSADLLAAIVECLMEIETGNNQPAFRSALNSMLDQLAKSEFSSV HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH RFVSEDFKWGLRWMGR HHHHHHHHHHHHHCCC >Mature Secondary Structure MYQWIVKLLELSTNLFTMYRWNNLPTIMRTNEAQNAFISAQFSLLMSELANLGGEKINEQ CHHHHHHHHHHHHHHEEEEEECCCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHH NLLKRILLKELPKCVLSDISVDTKVLIKEFAPEKWDAVFSTAVEEVVSILPEKTKKDFSE HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH TILNARDESPEGRIITVADLLSAKLEAEIHSRFFPEFYEEPLRRLKETLKEFNDFQPYKA HHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHH LVNSDWFENYRRALIVLLSAVRWNRLNRNVKTTVAGHSFYVAISGFLLAYTENQNGNSVD HHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCHHHHHHHCCCEEEEECCCCCCHH LVEVVKRTLFHDIPESVTGDIITPTKKKVPGFEEVISRVEEHMVNQRIFDSMDSELVKKL HHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KPRILDPFAGKEGEMVRSADLLAAIVECLMEIETGNNQPAFRSALNSMLDQLAKSEFSSV HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH RFVSEDFKWGLRWMGR HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA