| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is fusA [H]
Identifier: 239618268
GI number: 239618268
Start: 2025761
End: 2027830
Strand: Reverse
Name: fusA [H]
Synonym: Kole_1905
Alternate gene names: 239618268
Gene position: 2027830-2025761 (Counterclockwise)
Preceding gene: 239618269
Following gene: 239618267
Centisome position: 88.09
GC content: 45.85
Gene sequence:
>2070_bases GTGAAGGAGAGGCTAACAAGATTAGACGCAGTTAGAAACATAGGAATAATGGCTCACATTGATGCGGGAAAAACGACCAC AACCGAGCGTATTCTGTACTATACCGGGCGAAAGTACAAGTTAGGCAGCGTCGATGAAGGTACCGCTACAATGGATTGGA TGGACCAGGAAAAAGAGCGAGGCATTACTATCACATCGGCTGCCACTACCTGTTTCTGGCGCGACCACAGAATAAACATC ATTGATACACCCGGGCACGTTGACTTTACCGTCGAGGTTGAACGCTCCCTCAGAGTTCTTGACGGTGCTGTTGCGGTCTT TGACGTCTCAGCAGGCGTTGAACCCCAATCGGAGACTGTATGGCGACAAGCCGACAAGTACGGTGTCCCGAGAATTGCGT TCATGAACAAAATGGACAAAATAGGTGCCAACTTTGAGGCAGCCGTACAAAGCATGATCGACAAACTCAACGCCAATCCT GTTCCTGTACAGCTACCTATCGGTGCTGAATCTGAATTTGCTGGCGTAATTGATCTCGTCCGTATGAAAACGGTCCGCTG GTACAACGAGGATGGTACAGAATACGGGTTTGAAGATATCCCGGAAGAGCTCATTGATAAAGCTGAAGAGGCTCGGGAAG AACTTATTATGCACGTCGCTGAGTTCGATGAAGAACTCATGGAGCTTTATATTCAAGGTGAAGAAATCCCTCCCGAGCGA ATAGTAAAAGCGATAAGAAAGGGAACTCTCAACAACAAAATAGTTCCCGTACTCTGTGGGTCTGCATTTAGAAACAAAGG GGTTCAGCCTCTCCTGGATGCGATCGTTGACTATCTTCCATCACCGCTGGATCTCCCGCCTGTCGAAGGCTGGAATCCAG ACACAAATGAGAAAGTAGCTATCAACCCCGACGAAAGCGGACCCTTTGTTGGTCTTGCTTTTAAAATCATGGTGGATCCT TTCGTTGGAAAAGTAACCTTTGTTAGAGTTTATTCAGGTTCACTCCAAAAAGGAAGCTACATCTATAATGTCAACAAAGG AAAAAGGGAACGTGTCGCAAGATTACTCTTTATGCATGCTGATCAGCGTGAGGAAGTGGACTATGTTCGAACCGGTGATA TTGTTGCTATGGTAGGCCTTAAAAACACCATGACCGGTGAAACCATAGCTTCTGAAGGTTTCAAGGTATTACTTGAAAAC ATAGAATTCCCCGAGCCGGTTATTTCTCTAGCTGTAGAAGCGATGACAAAAGATGATTTAGCGAAACTTTCTAAAGCATT GCAGGCACTCACAGAAGAAGACCCATCACTAAAGGTAAACATAGATCCTGAAACCAACGAGACGATAATCTCCGGTATGG GTGAATTGCATTTGGAGGTTATCGTTGAAAGAATAAAGAGAGAGTTTGGGGTTCATGTTAGGGTTGGTCACCCGCAGGTT GCGTACCGTGAAACAATACGCAATGAATCAATAGCTGAAGGAAAGTACATCAGGCAATCCGGAGGTAGAGGACAGTACGG ACATGTTGTGATTAAAGTCAGTCCGGTTGAATCAGCTAAAGGTCTCGTTTTTGAAGACAAAACAGCCGGTGGTGTAATAC CGAAAGAATTCATTCCGGCCATCGAAAGCGGCATAAAAGAAGCTATGCAGTCCGGAGTCCTGGCGGGTTATCCTATGGTA AATATCAAGGCGGAGCTTCTCGATGGTTCATTCCACGAGGTTGATTCATCGGAGATGGCTTTCAAAATAGCCGCTTCTAT GGCTTTTAAAGAGGCGGCAAGAAAAGGAGCCCCGGTACTTCTCGAACCTATAATGGAAGTCGAGATCACAACACCGGAAG AGTACACAGGTGACATCGTAGCCGATCTGAATTCCAGAAGGGCGCGTATAGAAGGTTTTGAGACTCGTGCGGGCTTGAGA GTAATAAGAGCACATGTTCCGCTCTCAGAGCTCTTTGGATATGCAACAGTTATAAGGTCACTGTCGCAAGGTAGGGCAAG TTACGTAATCCAGTTCTCGCATTACGCTGAAGTACCGGAAAAAATAGTGAAAAAAATCTTTGGAGAATAA
Upstream 100 bases:
>100_bases GTTGCTGTCAAAAAGAGAGAAGACGTTCACAGAATGGCTGAAGCCGGAAAGGCTTACGCTCACTTCAGGTGGTGAGCTTA GTTTTACAGGAGGATAGATC
Downstream 100 bases:
>100_bases ACCTATAACCACTTCCAAAAGGAGGGAAAGAAATGGCTAAGGAAAAATTTGAACGAACAAAACCACATCTTAACATTGGT ACAATCGGACACATTGACCA
Product: elongation factor G
Products: GDP; phosphate
Alternate protein names: EF-G [H]
Number of amino acids: Translated: 689; Mature: 689
Protein sequence:
>689_residues MKERLTRLDAVRNIGIMAHIDAGKTTTTERILYYTGRKYKLGSVDEGTATMDWMDQEKERGITITSAATTCFWRDHRINI IDTPGHVDFTVEVERSLRVLDGAVAVFDVSAGVEPQSETVWRQADKYGVPRIAFMNKMDKIGANFEAAVQSMIDKLNANP VPVQLPIGAESEFAGVIDLVRMKTVRWYNEDGTEYGFEDIPEELIDKAEEAREELIMHVAEFDEELMELYIQGEEIPPER IVKAIRKGTLNNKIVPVLCGSAFRNKGVQPLLDAIVDYLPSPLDLPPVEGWNPDTNEKVAINPDESGPFVGLAFKIMVDP FVGKVTFVRVYSGSLQKGSYIYNVNKGKRERVARLLFMHADQREEVDYVRTGDIVAMVGLKNTMTGETIASEGFKVLLEN IEFPEPVISLAVEAMTKDDLAKLSKALQALTEEDPSLKVNIDPETNETIISGMGELHLEVIVERIKREFGVHVRVGHPQV AYRETIRNESIAEGKYIRQSGGRGQYGHVVIKVSPVESAKGLVFEDKTAGGVIPKEFIPAIESGIKEAMQSGVLAGYPMV NIKAELLDGSFHEVDSSEMAFKIAASMAFKEAARKGAPVLLEPIMEVEITTPEEYTGDIVADLNSRRARIEGFETRAGLR VIRAHVPLSELFGYATVIRSLSQGRASYVIQFSHYAEVPEKIVKKIFGE
Sequences:
>Translated_689_residues MKERLTRLDAVRNIGIMAHIDAGKTTTTERILYYTGRKYKLGSVDEGTATMDWMDQEKERGITITSAATTCFWRDHRINI IDTPGHVDFTVEVERSLRVLDGAVAVFDVSAGVEPQSETVWRQADKYGVPRIAFMNKMDKIGANFEAAVQSMIDKLNANP VPVQLPIGAESEFAGVIDLVRMKTVRWYNEDGTEYGFEDIPEELIDKAEEAREELIMHVAEFDEELMELYIQGEEIPPER IVKAIRKGTLNNKIVPVLCGSAFRNKGVQPLLDAIVDYLPSPLDLPPVEGWNPDTNEKVAINPDESGPFVGLAFKIMVDP FVGKVTFVRVYSGSLQKGSYIYNVNKGKRERVARLLFMHADQREEVDYVRTGDIVAMVGLKNTMTGETIASEGFKVLLEN IEFPEPVISLAVEAMTKDDLAKLSKALQALTEEDPSLKVNIDPETNETIISGMGELHLEVIVERIKREFGVHVRVGHPQV AYRETIRNESIAEGKYIRQSGGRGQYGHVVIKVSPVESAKGLVFEDKTAGGVIPKEFIPAIESGIKEAMQSGVLAGYPMV NIKAELLDGSFHEVDSSEMAFKIAASMAFKEAARKGAPVLLEPIMEVEITTPEEYTGDIVADLNSRRARIEGFETRAGLR VIRAHVPLSELFGYATVIRSLSQGRASYVIQFSHYAEVPEKIVKKIFGE >Mature_689_residues MKERLTRLDAVRNIGIMAHIDAGKTTTTERILYYTGRKYKLGSVDEGTATMDWMDQEKERGITITSAATTCFWRDHRINI IDTPGHVDFTVEVERSLRVLDGAVAVFDVSAGVEPQSETVWRQADKYGVPRIAFMNKMDKIGANFEAAVQSMIDKLNANP VPVQLPIGAESEFAGVIDLVRMKTVRWYNEDGTEYGFEDIPEELIDKAEEAREELIMHVAEFDEELMELYIQGEEIPPER IVKAIRKGTLNNKIVPVLCGSAFRNKGVQPLLDAIVDYLPSPLDLPPVEGWNPDTNEKVAINPDESGPFVGLAFKIMVDP FVGKVTFVRVYSGSLQKGSYIYNVNKGKRERVARLLFMHADQREEVDYVRTGDIVAMVGLKNTMTGETIASEGFKVLLEN IEFPEPVISLAVEAMTKDDLAKLSKALQALTEEDPSLKVNIDPETNETIISGMGELHLEVIVERIKREFGVHVRVGHPQV AYRETIRNESIAEGKYIRQSGGRGQYGHVVIKVSPVESAKGLVFEDKTAGGVIPKEFIPAIESGIKEAMQSGVLAGYPMV NIKAELLDGSFHEVDSSEMAFKIAASMAFKEAARKGAPVLLEPIMEVEITTPEEYTGDIVADLNSRRARIEGFETRAGLR VIRAHVPLSELFGYATVIRSLSQGRASYVIQFSHYAEVPEKIVKKIFGE
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=680, Percent_Identity=45, Blast_Score=565, Evalue=1e-161, Organism=Homo sapiens, GI19923640, Length=705, Percent_Identity=42.4113475177305, Blast_Score=525, Evalue=1e-149, Organism=Homo sapiens, GI25306287, Length=704, Percent_Identity=39.4886363636364, Blast_Score=460, Evalue=1e-129, Organism=Homo sapiens, GI25306283, Length=438, Percent_Identity=46.5753424657534, Blast_Score=363, Evalue=1e-100, Organism=Homo sapiens, GI4503483, Length=479, Percent_Identity=25.678496868476, Blast_Score=110, Evalue=5e-24, Organism=Homo sapiens, GI157426893, Length=153, Percent_Identity=33.3333333333333, Blast_Score=92, Evalue=2e-18, Organism=Homo sapiens, GI94966754, Length=136, Percent_Identity=36.7647058823529, Blast_Score=91, Evalue=3e-18, Organism=Homo sapiens, GI310132016, Length=118, Percent_Identity=35.5932203389831, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI310110807, Length=118, Percent_Identity=35.5932203389831, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI310123363, Length=118, Percent_Identity=35.5932203389831, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI217272894, Length=136, Percent_Identity=30.1470588235294, Blast_Score=69, Evalue=2e-11, Organism=Homo sapiens, GI217272892, Length=136, Percent_Identity=30.1470588235294, Blast_Score=69, Evalue=2e-11, Organism=Escherichia coli, GI1789738, Length=697, Percent_Identity=56.0975609756098, Blast_Score=783, Evalue=0.0, Organism=Escherichia coli, GI1790835, Length=479, Percent_Identity=28.39248434238, Blast_Score=160, Evalue=2e-40, Organism=Escherichia coli, GI48994988, Length=175, Percent_Identity=38.8571428571429, Blast_Score=117, Evalue=3e-27, Organism=Escherichia coli, GI1788922, Length=149, Percent_Identity=36.9127516778523, Blast_Score=95, Evalue=2e-20, Organism=Escherichia coli, GI1789737, Length=139, Percent_Identity=30.9352517985612, Blast_Score=65, Evalue=2e-11, Organism=Escherichia coli, GI1790412, Length=139, Percent_Identity=30.9352517985612, Blast_Score=65, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17533571, Length=680, Percent_Identity=41.4705882352941, Blast_Score=517, Evalue=1e-147, Organism=Caenorhabditis elegans, GI17556745, Length=725, Percent_Identity=31.8620689655172, Blast_Score=338, Evalue=5e-93, Organism=Caenorhabditis elegans, GI17552882, Length=800, Percent_Identity=21.875, Blast_Score=116, Evalue=5e-26, Organism=Caenorhabditis elegans, GI17506493, Length=475, Percent_Identity=25.4736842105263, Blast_Score=109, Evalue=4e-24, Organism=Caenorhabditis elegans, GI17557151, Length=153, Percent_Identity=35.9477124183007, Blast_Score=98, Evalue=1e-20, Organism=Caenorhabditis elegans, GI71988819, Length=132, Percent_Identity=34.0909090909091, Blast_Score=79, Evalue=1e-14, Organism=Caenorhabditis elegans, GI71988811, Length=132, Percent_Identity=34.0909090909091, Blast_Score=78, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6323098, Length=702, Percent_Identity=42.3076923076923, Blast_Score=563, Evalue=1e-161, Organism=Saccharomyces cerevisiae, GI6322359, Length=790, Percent_Identity=33.0379746835443, Blast_Score=397, Evalue=1e-111, Organism=Saccharomyces cerevisiae, GI6324707, Length=479, Percent_Identity=24.6346555323591, Blast_Score=120, Evalue=7e-28, Organism=Saccharomyces cerevisiae, GI6320593, Length=479, Percent_Identity=24.6346555323591, Blast_Score=120, Evalue=7e-28, Organism=Saccharomyces cerevisiae, GI6323320, Length=171, Percent_Identity=32.7485380116959, Blast_Score=91, Evalue=8e-19, Organism=Saccharomyces cerevisiae, GI6324166, Length=157, Percent_Identity=33.1210191082803, Blast_Score=77, Evalue=7e-15, Organism=Drosophila melanogaster, GI24582462, Length=695, Percent_Identity=43.5971223021583, Blast_Score=575, Evalue=1e-164, Organism=Drosophila melanogaster, GI221458488, Length=719, Percent_Identity=34.6314325452017, Blast_Score=391, Evalue=1e-108, Organism=Drosophila melanogaster, GI24585711, Length=482, Percent_Identity=24.0663900414938, Blast_Score=102, Evalue=6e-22, Organism=Drosophila melanogaster, GI24585713, Length=482, Percent_Identity=24.0663900414938, Blast_Score=102, Evalue=6e-22, Organism=Drosophila melanogaster, GI24585709, Length=482, Percent_Identity=24.0663900414938, Blast_Score=102, Evalue=7e-22, Organism=Drosophila melanogaster, GI78706572, Length=149, Percent_Identity=34.8993288590604, Blast_Score=97, Evalue=5e-20, Organism=Drosophila melanogaster, GI28574573, Length=146, Percent_Identity=35.6164383561644, Blast_Score=86, Evalue=1e-16,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 76588; Mature: 76588
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: PS00301 EFACTOR_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKERLTRLDAVRNIGIMAHIDAGKTTTTERILYYTGRKYKLGSVDEGTATMDWMDQEKER CCHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEECCEEECCCCCCCCCCHHHHHHHHHC GITITSAATTCFWRDHRINIIDTPGHVDFTVEVERSLRVLDGAVAVFDVSAGVEPQSETV CEEEEECCEEEEEECCEEEEEECCCCEEEEEEHHHHHHHHHCEEEEEEECCCCCCCHHHH WRQADKYGVPRIAFMNKMDKIGANFEAAVQSMIDKLNANPVPVQLPIGAESEFAGVIDLV HHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHH RMKTVRWYNEDGTEYGFEDIPEELIDKAEEAREELIMHVAEFDEELMELYIQGEEIPPER HHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH IVKAIRKGTLNNKIVPVLCGSAFRNKGVQPLLDAIVDYLPSPLDLPPVEGWNPDTNEKVA HHHHHHHCCCCCCEEEEEECCHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEE INPDESGPFVGLAFKIMVDPFVGKVTFVRVYSGSLQKGSYIYNVNKGKRERVARLLFMHA ECCCCCCCEEEEEEEEEECCCCCCEEEEEEECCCCCCCCEEEECCCCHHHHHHHHHHHCC DQREEVDYVRTGDIVAMVGLKNTMTGETIASEGFKVLLENIEFPEPVISLAVEAMTKDDL CCCCCCCEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH AKLSKALQALTEEDPSLKVNIDPETNETIISGMGELHLEVIVERIKREFGVHVRVGHPQV HHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCH AYRETIRNESIAEGKYIRQSGGRGQYGHVVIKVSPVESAKGLVFEDKTAGGVIPKEFIPA HHHHHHCCCCCCCCCHHHCCCCCCCCCEEEEEEECCCCCCCCEEECCCCCCCCCHHHHHH IESGIKEAMQSGVLAGYPMVNIKAELLDGSFHEVDSSEMAFKIAASMAFKEAARKGAPVL HHHHHHHHHHCCCEECCCEEEEEHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCCEE LEPIMEVEITTPEEYTGDIVADLNSRRARIEGFETRAGLRVIRAHVPLSELFGYATVIRS EECCEEEEEECCCHHCCCHHCCCCCCHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH LSQGRASYVIQFSHYAEVPEKIVKKIFGE HHCCCEEEEEEEHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKERLTRLDAVRNIGIMAHIDAGKTTTTERILYYTGRKYKLGSVDEGTATMDWMDQEKER CCHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEECCEEECCCCCCCCCCHHHHHHHHHC GITITSAATTCFWRDHRINIIDTPGHVDFTVEVERSLRVLDGAVAVFDVSAGVEPQSETV CEEEEECCEEEEEECCEEEEEECCCCEEEEEEHHHHHHHHHCEEEEEEECCCCCCCHHHH WRQADKYGVPRIAFMNKMDKIGANFEAAVQSMIDKLNANPVPVQLPIGAESEFAGVIDLV HHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHH RMKTVRWYNEDGTEYGFEDIPEELIDKAEEAREELIMHVAEFDEELMELYIQGEEIPPER HHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH IVKAIRKGTLNNKIVPVLCGSAFRNKGVQPLLDAIVDYLPSPLDLPPVEGWNPDTNEKVA HHHHHHHCCCCCCEEEEEECCHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEE INPDESGPFVGLAFKIMVDPFVGKVTFVRVYSGSLQKGSYIYNVNKGKRERVARLLFMHA ECCCCCCCEEEEEEEEEECCCCCCEEEEEEECCCCCCCCEEEECCCCHHHHHHHHHHHCC DQREEVDYVRTGDIVAMVGLKNTMTGETIASEGFKVLLENIEFPEPVISLAVEAMTKDDL CCCCCCCEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH AKLSKALQALTEEDPSLKVNIDPETNETIISGMGELHLEVIVERIKREFGVHVRVGHPQV HHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCH AYRETIRNESIAEGKYIRQSGGRGQYGHVVIKVSPVESAKGLVFEDKTAGGVIPKEFIPA HHHHHHCCCCCCCCCHHHCCCCCCCCCEEEEEEECCCCCCCCEEECCCCCCCCCHHHHHH IESGIKEAMQSGVLAGYPMVNIKAELLDGSFHEVDSSEMAFKIAASMAFKEAARKGAPVL HHHHHHHHHHCCCEECCCEEEEEHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCCEE LEPIMEVEITTPEEYTGDIVADLNSRRARIEGFETRAGLRVIRAHVPLSELFGYATVIRS EECCEEEEEECCCHHCCCHHCCCCCCHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH LSQGRASYVIQFSHYAEVPEKIVKKIFGE HHCCCEEEEEEEHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA