| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is aegA [H]
Identifier: 239618192
GI number: 239618192
Start: 1956202
End: 1957602
Strand: Direct
Name: aegA [H]
Synonym: Kole_1828
Alternate gene names: 239618192
Gene position: 1956202-1957602 (Clockwise)
Preceding gene: 239618191
Following gene: 239618193
Centisome position: 84.97
GC content: 47.47
Gene sequence:
>1401_bases GTGAGCAGACCCAAGAAAGTTCCGATGCCTGAATTACCACCACACGAAAGAATAGTGTCTTTTAAAGAAGTTGCTTTAGG GTACACAGAAGAGCAGGCTGTTGTAGAAGCCCAGCGTTGCCTTCAGTGTAAAGTACCACTGTGTATTCAAGGATGCCCCG TTGGTATTGATATTCCCGGATTCATCCGAGCCATAAGCGAAAGGGATTTTGACAGTGGAATAAAGATATTAAAGGATAGC AACAGCTTACCCGCGATCACAGGGAGAGTATGTCCACAGGAAAAGCAATGTGAGGCAAAATGCGTGCTTGGAAAGATCAA AGGGACTGAACCGGTAGCCATAGGCAGGATGGAGAGGTTTCTGGCGGATATGGATCTCAAAGCCTGCCCTAAATCGGTGC AACGGGTGAGGAAAAACAAAGGTAATGTGGCGGTTATCGGAGCGGGGCCCGCGGGACTTACCGTTGCCGGCGACCTGGCG AAACTCGGATATGAGGTAACGGTTTTTGAGGCTTTTCACAAGGCCGGTGGAGTGCTTGTTTATGGAATCCCGGAATTCAG GCTTCCAAAAGATATAGTACAGAAGGAAGTCGAGTATGTTCAATCGCTGGGAGTCAAATTTGTTTACAATCAAATCATCG GAAGAACTATTCCTTTTGAAGAATTGAGGAATGAGTATGACGCTATATTTATAGGCATCGGTGCCGGGGCACCAAGATTC ATGGGGATACCCGGTTCGAATCTCAATAACATATACTCGGCCAGTGAATTTCTGACACGTGTTAACTTAATGAGGGCAAA CCGGTTTCCTGAGTACGATACACCCGTTAAGATTTCCGATAGGGTTGCGGTTATCGGTGCAGGGAACGTCTCCATGGATG CCGCAAGGACAGCCAAAAGGCTCGGTGCAAAAGAGGTTACCATAATCTACCGCAGGAGTGAAGCCGAAATGCCTGCAAGG CTTGAAGAATATCACCATGCCCTTGAAGAAGAGATAAAATTCTTCTGGCTAACACAACCGGTGGAATACATTGGCGACAT AAACAACAATGTCAGGAAAATGAGATGTGTCAGGATGGAATTGGGATCTCCGGATGAATCAGGTCGAAGAAGACCGATTC CCATTGAGGGATCGGAGTTCGAGATAGAGATCGATCTTGTCATAGAAGCCATAGGCCAAAAAGCCAATGCTGTTTTGAAA ACAGGCTTTCCGGGATTGAAACTCAATCGTTGGGGTTATATCGATGCTGATCCCGAGACAGGTCAGACCAATCTTGAAGG CGTTTTTGCAGGAGGCGACATAGTAACAGGAGCCGCAACGGTTATAGAAGCCATGGGTGCGGGGAAAAAGGCTGCTAAGG CGATTGGGGAGTATCTGCTGAAAGCCAGCAAAGCTGGCTGA
Upstream 100 bases:
>100_bases TCAACTGGAACGAATTGATAAAACGCCAGCATCAATACATGGAAGAAGAAAGAAAAGCGCTTGAGGCTTTTAAGAAAAAG GCTGGTGATCTCTCATGGCT
Downstream 100 bases:
>100_bases AGTGCTGGACTACGTCCAGGAGGCTCACGACGTTGTCAGTTGATGGAGCGATGCGAACCGCAAGCGGTTGTCACGAACTC CTGGTAAGAATCGAGAGTCC
Product: glutamate synthase (NADPH), homotetrameric
Products: L-glutamine; 2-oxoglutarate; NADPH; H+
Alternate protein names: NA
Number of amino acids: Translated: 466; Mature: 465
Protein sequence:
>466_residues MSRPKKVPMPELPPHERIVSFKEVALGYTEEQAVVEAQRCLQCKVPLCIQGCPVGIDIPGFIRAISERDFDSGIKILKDS NSLPAITGRVCPQEKQCEAKCVLGKIKGTEPVAIGRMERFLADMDLKACPKSVQRVRKNKGNVAVIGAGPAGLTVAGDLA KLGYEVTVFEAFHKAGGVLVYGIPEFRLPKDIVQKEVEYVQSLGVKFVYNQIIGRTIPFEELRNEYDAIFIGIGAGAPRF MGIPGSNLNNIYSASEFLTRVNLMRANRFPEYDTPVKISDRVAVIGAGNVSMDAARTAKRLGAKEVTIIYRRSEAEMPAR LEEYHHALEEEIKFFWLTQPVEYIGDINNNVRKMRCVRMELGSPDESGRRRPIPIEGSEFEIEIDLVIEAIGQKANAVLK TGFPGLKLNRWGYIDADPETGQTNLEGVFAGGDIVTGAATVIEAMGAGKKAAKAIGEYLLKASKAG
Sequences:
>Translated_466_residues MSRPKKVPMPELPPHERIVSFKEVALGYTEEQAVVEAQRCLQCKVPLCIQGCPVGIDIPGFIRAISERDFDSGIKILKDS NSLPAITGRVCPQEKQCEAKCVLGKIKGTEPVAIGRMERFLADMDLKACPKSVQRVRKNKGNVAVIGAGPAGLTVAGDLA KLGYEVTVFEAFHKAGGVLVYGIPEFRLPKDIVQKEVEYVQSLGVKFVYNQIIGRTIPFEELRNEYDAIFIGIGAGAPRF MGIPGSNLNNIYSASEFLTRVNLMRANRFPEYDTPVKISDRVAVIGAGNVSMDAARTAKRLGAKEVTIIYRRSEAEMPAR LEEYHHALEEEIKFFWLTQPVEYIGDINNNVRKMRCVRMELGSPDESGRRRPIPIEGSEFEIEIDLVIEAIGQKANAVLK TGFPGLKLNRWGYIDADPETGQTNLEGVFAGGDIVTGAATVIEAMGAGKKAAKAIGEYLLKASKAG >Mature_465_residues SRPKKVPMPELPPHERIVSFKEVALGYTEEQAVVEAQRCLQCKVPLCIQGCPVGIDIPGFIRAISERDFDSGIKILKDSN SLPAITGRVCPQEKQCEAKCVLGKIKGTEPVAIGRMERFLADMDLKACPKSVQRVRKNKGNVAVIGAGPAGLTVAGDLAK LGYEVTVFEAFHKAGGVLVYGIPEFRLPKDIVQKEVEYVQSLGVKFVYNQIIGRTIPFEELRNEYDAIFIGIGAGAPRFM GIPGSNLNNIYSASEFLTRVNLMRANRFPEYDTPVKISDRVAVIGAGNVSMDAARTAKRLGAKEVTIIYRRSEAEMPARL EEYHHALEEEIKFFWLTQPVEYIGDINNNVRKMRCVRMELGSPDESGRRRPIPIEGSEFEIEIDLVIEAIGQKANAVLKT GFPGLKLNRWGYIDADPETGQTNLEGVFAGGDIVTGAATVIEAMGAGKKAAKAIGEYLLKASKAG
Specific function: Unknown
COG id: COG0493
COG function: function code ER; NADPH-dependent glutamate synthase beta chain and related oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 4 4Fe-4S ferredoxin-type domains [H]
Homologues:
Organism=Homo sapiens, GI119943098, Length=465, Percent_Identity=32.4731182795699, Blast_Score=202, Evalue=7e-52, Organism=Escherichia coli, GI1788811, Length=450, Percent_Identity=37.1111111111111, Blast_Score=288, Evalue=6e-79, Organism=Escherichia coli, GI87082180, Length=448, Percent_Identity=38.1696428571429, Blast_Score=286, Evalue=2e-78, Organism=Escherichia coli, GI1789606, Length=463, Percent_Identity=34.7732181425486, Blast_Score=261, Evalue=5e-71, Organism=Escherichia coli, GI1788468, Length=444, Percent_Identity=31.981981981982, Blast_Score=212, Evalue=4e-56, Organism=Escherichia coli, GI1789243, Length=420, Percent_Identity=34.0476190476191, Blast_Score=203, Evalue=1e-53, Organism=Caenorhabditis elegans, GI71984108, Length=453, Percent_Identity=31.1258278145695, Blast_Score=180, Evalue=1e-45, Organism=Caenorhabditis elegans, GI17570289, Length=482, Percent_Identity=28.2157676348548, Blast_Score=162, Evalue=2e-40, Organism=Caenorhabditis elegans, GI17543860, Length=175, Percent_Identity=33.1428571428571, Blast_Score=84, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6320030, Length=478, Percent_Identity=30.5439330543933, Blast_Score=196, Evalue=5e-51, Organism=Drosophila melanogaster, GI24665547, Length=481, Percent_Identity=29.9376299376299, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI24665543, Length=481, Percent_Identity=29.9376299376299, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI28574881, Length=481, Percent_Identity=29.9376299376299, Blast_Score=183, Evalue=3e-46, Organism=Drosophila melanogaster, GI24665539, Length=481, Percent_Identity=29.9376299376299, Blast_Score=183, Evalue=3e-46, Organism=Drosophila melanogaster, GI24640763, Length=449, Percent_Identity=28.9532293986637, Blast_Score=157, Evalue=1e-38, Organism=Drosophila melanogaster, GI18858217, Length=449, Percent_Identity=28.9532293986637, Blast_Score=157, Evalue=1e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR013027 - InterPro: IPR012285 - InterPro: IPR006006 [H]
Pfam domain/function: PF00037 Fer4; PF07992 Pyr_redox_2 [H]
EC number: 1.4.1.13
Molecular weight: Translated: 51030; Mature: 50899
Theoretical pI: Translated: 8.12; Mature: 8.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRPKKVPMPELPPHERIVSFKEVALGYTEEQAVVEAQRCLQCKVPLCIQGCPVGIDIPG CCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHH FIRAISERDFDSGIKILKDSNSLPAITGRVCPQEKQCEAKCVLGKIKGTEPVAIGRMERF HHHHHHHCCCCCCCEEEECCCCCCEEECCCCCCCCCCCHHEEEEECCCCCCCHHHHHHHH LADMDLKACPKSVQRVRKNKGNVAVIGAGPAGLTVAGDLAKLGYEVTVFEAFHKAGGVLV HHHCCHHHCHHHHHHHHHCCCCEEEEECCCCCCEEECHHHHCCCEEEEHHHHHHHCCEEE YGIPEFRLPKDIVQKEVEYVQSLGVKFVYNQIIGRTIPFEELRNEYDAIFIGIGAGAPRF ECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHCCCCCEEEEECCCCCCCE MGIPGSNLNNIYSASEFLTRVNLMRANRFPEYDTPVKISDRVAVIGAGNVSMDAARTAKR ECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCEEEEECCCCCHHHHHHHHH LGAKEVTIIYRRSEAEMPARLEEYHHALEEEIKFFWLTQPVEYIGDINNNVRKMRCVRME CCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCEEEEECCCHHHHHCCCCCHHHHHEEEEC LGSPDESGRRRPIPIEGSEFEIEIDLVIEAIGQKANAVLKTGFPGLKLNRWGYIDADPET CCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHCCHHCEEEECCCCCCEECCCEEECCCCCC GQTNLEGVFAGGDIVTGAATVIEAMGAGKKAAKAIGEYLLKASKAG CCCCCCEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SRPKKVPMPELPPHERIVSFKEVALGYTEEQAVVEAQRCLQCKVPLCIQGCPVGIDIPG CCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHH FIRAISERDFDSGIKILKDSNSLPAITGRVCPQEKQCEAKCVLGKIKGTEPVAIGRMERF HHHHHHHCCCCCCCEEEECCCCCCEEECCCCCCCCCCCHHEEEEECCCCCCCHHHHHHHH LADMDLKACPKSVQRVRKNKGNVAVIGAGPAGLTVAGDLAKLGYEVTVFEAFHKAGGVLV HHHCCHHHCHHHHHHHHHCCCCEEEEECCCCCCEEECHHHHCCCEEEEHHHHHHHCCEEE YGIPEFRLPKDIVQKEVEYVQSLGVKFVYNQIIGRTIPFEELRNEYDAIFIGIGAGAPRF ECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHCCCCCEEEEECCCCCCCE MGIPGSNLNNIYSASEFLTRVNLMRANRFPEYDTPVKISDRVAVIGAGNVSMDAARTAKR ECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCEEEEECCCCCHHHHHHHHH LGAKEVTIIYRRSEAEMPARLEEYHHALEEEIKFFWLTQPVEYIGDINNNVRKMRCVRME CCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCEEEEECCCHHHHHCCCCCHHHHHEEEEC LGSPDESGRRRPIPIEGSEFEIEIDLVIEAIGQKANAVLKTGFPGLKLNRWGYIDADPET CCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHCCHHCEEEECCCCCCEECCCEEECCCCCC GQTNLEGVFAGGDIVTGAATVIEAMGAGKKAAKAIGEYLLKASKAG CCCCCCEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-glutamate; NADP+
Specific reaction: 2 L-glutamate + NADP+ = L-glutamine + 2-oxoglutarate + NADPH + H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8955321; 9205837; 9278503 [H]