| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239618151
Identifier: 239618151
GI number: 239618151
Start: 1913875
End: 1915116
Strand: Direct
Name: 239618151
Synonym: Kole_1784
Alternate gene names: NA
Gene position: 1913875-1915116 (Clockwise)
Preceding gene: 239618150
Following gene: 239618152
Centisome position: 83.14
GC content: 42.91
Gene sequence:
>1242_bases TTGTCAGTAGTACGTCCATTTAGAGCAGTAAGACCAAAAGCCGAGCTCGTTGAAAAAGTGAACTGTCCTCCCTACGACGT GGTTAGTTATGAAGAGGCAAAGGAATATGGAAAGACTCCGGAAAGTTTCATGCACATCATCCGTGCGGAGATCGATCTTC CAGAGGGAACACCTCATTACGGAAAACCTGTTTATGAAAAAGCGCGTGATAACCTGAGAGAATTCATTGAAAAAGGAATT CTCGTTCAAGATGACGAACCGCGGTACTACATTTATTGGCAAAAGATGGGAGACCACGTTCAGATAGGTGTTGTTGGATG TGCATCGGTTGACGAATACCAGAAAGGTCTCATCAAAAAGCATGAACTCACAAGACAGGACAAGGAAGATGATAGAGCCA ACCATGTTTATACGGTTGGAGCGAATACCGGTCCTGTGTTCTTAACTTTCCGCTCTACCGGGAAATTTGACAACCTTCTT AAAGAGCTCGTCGAAAAGCTAACCCCAATTTATGACTTTACTGATGAAAATGGTGTAATTCACAGAGTGTATCCTGTAAA AGAAAAAGAAGACATAGAAAAAGTAGAGAAAGCTTTTGAAGAGATTCCCGCTCTCTATATAGCTGATGGTCATCACAGAG CGGCATCTGCTTCCCGCGTCAGGGAAATGATGAAATCAGAAAACCCAGCTCATACGGGTACGGAAGAATACAATTTCTTC CTTTCCGTTATATTTCCTCACAGTCACCTTCAAGTTCTTGATTACAACAGAGTTGTTAAAGATCTGAATGGGCTCAGCAA AGAGGAATTCCTTGAAAAGATTGGTGAAAAGTTCGAGGTTTCAGAGGCACCTGAGGCTCCGTACAAGCCCAAGAAAAAAC ATGAATTTGGAATGTACCTTGACGGCAAATGGTACGTTTTGCGAGCTAAGCCCGGTAGCTTCGATGAAAATGATCCTGTG AAAAGTCTGGATGCTTCCATACTTCAGGAAAATCTGTTGCACCCGATACTCGGCATTGAGAATCCCAGAAAAGATCCCAG AATTGATTTTATAGGTGGAATTAGAGGACTTGGCGCACTTGAAAAGAGGGTTAATGAAGGTTGGGCAGTAGCTTTTTCAA TGTTCCCAACATCGATTGATGAGCTCATGACGGTGGCGGATAAGGGCATGATAATGCCACCAAAATCCACATGGTTTGAA CCAAAACTCAGAAGTGGACTCTTCGTGCATTTGTTGAAATGA
Upstream 100 bases:
>100_bases GAGGCAAAAATAATGTTTGAAAAACAGGAAGACTACTTCAATAAATACGGTAAGAACATCTCTATATAAAACAGCTAAGT AGTTCGAAGGAGGGATAATC
Downstream 100 bases:
>100_bases GAATAAAGGTAGCGGCCGTCATAGTTGCTGGTGGTAAGGGAACACGCTTTGGCGCGAATGTTCCTAAACAATTTATCAAG CTTGAAGGAAAGGAAATATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 413; Mature: 412
Protein sequence:
>413_residues MSVVRPFRAVRPKAELVEKVNCPPYDVVSYEEAKEYGKTPESFMHIIRAEIDLPEGTPHYGKPVYEKARDNLREFIEKGI LVQDDEPRYYIYWQKMGDHVQIGVVGCASVDEYQKGLIKKHELTRQDKEDDRANHVYTVGANTGPVFLTFRSTGKFDNLL KELVEKLTPIYDFTDENGVIHRVYPVKEKEDIEKVEKAFEEIPALYIADGHHRAASASRVREMMKSENPAHTGTEEYNFF LSVIFPHSHLQVLDYNRVVKDLNGLSKEEFLEKIGEKFEVSEAPEAPYKPKKKHEFGMYLDGKWYVLRAKPGSFDENDPV KSLDASILQENLLHPILGIENPRKDPRIDFIGGIRGLGALEKRVNEGWAVAFSMFPTSIDELMTVADKGMIMPPKSTWFE PKLRSGLFVHLLK
Sequences:
>Translated_413_residues MSVVRPFRAVRPKAELVEKVNCPPYDVVSYEEAKEYGKTPESFMHIIRAEIDLPEGTPHYGKPVYEKARDNLREFIEKGI LVQDDEPRYYIYWQKMGDHVQIGVVGCASVDEYQKGLIKKHELTRQDKEDDRANHVYTVGANTGPVFLTFRSTGKFDNLL KELVEKLTPIYDFTDENGVIHRVYPVKEKEDIEKVEKAFEEIPALYIADGHHRAASASRVREMMKSENPAHTGTEEYNFF LSVIFPHSHLQVLDYNRVVKDLNGLSKEEFLEKIGEKFEVSEAPEAPYKPKKKHEFGMYLDGKWYVLRAKPGSFDENDPV KSLDASILQENLLHPILGIENPRKDPRIDFIGGIRGLGALEKRVNEGWAVAFSMFPTSIDELMTVADKGMIMPPKSTWFE PKLRSGLFVHLLK >Mature_412_residues SVVRPFRAVRPKAELVEKVNCPPYDVVSYEEAKEYGKTPESFMHIIRAEIDLPEGTPHYGKPVYEKARDNLREFIEKGIL VQDDEPRYYIYWQKMGDHVQIGVVGCASVDEYQKGLIKKHELTRQDKEDDRANHVYTVGANTGPVFLTFRSTGKFDNLLK ELVEKLTPIYDFTDENGVIHRVYPVKEKEDIEKVEKAFEEIPALYIADGHHRAASASRVREMMKSENPAHTGTEEYNFFL SVIFPHSHLQVLDYNRVVKDLNGLSKEEFLEKIGEKFEVSEAPEAPYKPKKKHEFGMYLDGKWYVLRAKPGSFDENDPVK SLDASILQENLLHPILGIENPRKDPRIDFIGGIRGLGALEKRVNEGWAVAFSMFPTSIDELMTVADKGMIMPPKSTWFEP KLRSGLFVHLLK
Specific function: Unknown
COG id: COG4198
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47391; Mature: 47259
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVVRPFRAVRPKAELVEKVNCPPYDVVSYEEAKEYGKTPESFMHIIRAEIDLPEGTPHY CCCCCCHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCC GKPVYEKARDNLREFIEKGILVQDDEPRYYIYWQKMGDHVQIGVVGCASVDEYQKGLIKK CCHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEECCCCEEEEEEEECCCHHHHHHHHHHH HELTRQDKEDDRANHVYTVGANTGPVFLTFRSTGKFDNLLKELVEKLTPIYDFTDENGVI HHHHHCCCCCCCCCEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEE HRVYPVKEKEDIEKVEKAFEEIPALYIADGHHRAASASRVREMMKSENPAHTGTEEYNFF EEEECCCCHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEE LSVIFPHSHLQVLDYNRVVKDLNGLSKEEFLEKIGEKFEVSEAPEAPYKPKKKHEFGMYL EEEEECCCCEEEHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEE DGKWYVLRAKPGSFDENDPVKSLDASILQENLLHPILGIENPRKDPRIDFIGGIRGLGAL CCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCHHHHHHH EKRVNEGWAVAFSMFPTSIDELMTVADKGMIMPPKSTWFEPKLRSGLFVHLLK HHHHCCCEEEEEECCCCCHHHHHHHHHCCEEECCCCCCCCHHHHCCEEEEECC >Mature Secondary Structure SVVRPFRAVRPKAELVEKVNCPPYDVVSYEEAKEYGKTPESFMHIIRAEIDLPEGTPHY CCCCCHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCC GKPVYEKARDNLREFIEKGILVQDDEPRYYIYWQKMGDHVQIGVVGCASVDEYQKGLIKK CCHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEECCCCEEEEEEEECCCHHHHHHHHHHH HELTRQDKEDDRANHVYTVGANTGPVFLTFRSTGKFDNLLKELVEKLTPIYDFTDENGVI HHHHHCCCCCCCCCEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEE HRVYPVKEKEDIEKVEKAFEEIPALYIADGHHRAASASRVREMMKSENPAHTGTEEYNFF EEEECCCCHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEE LSVIFPHSHLQVLDYNRVVKDLNGLSKEEFLEKIGEKFEVSEAPEAPYKPKKKHEFGMYL EEEEECCCCEEEHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEE DGKWYVLRAKPGSFDENDPVKSLDASILQENLLHPILGIENPRKDPRIDFIGGIRGLGAL CCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCHHHHHHH EKRVNEGWAVAFSMFPTSIDELMTVADKGMIMPPKSTWFEPKLRSGLFVHLLK HHHHCCCEEEEEECCCCCHHHHHHHHHCCEEECCCCCCCCHHHHCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA