| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is yqfF [H]
Identifier: 239618149
GI number: 239618149
Start: 1912007
End: 1913425
Strand: Direct
Name: yqfF [H]
Synonym: Kole_1782
Alternate gene names: 239618149
Gene position: 1912007-1913425 (Clockwise)
Preceding gene: 239618148
Following gene: 239618150
Centisome position: 83.05
GC content: 41.72
Gene sequence:
>1419_bases ATGATCGCTGAAAACTCCGTGGGTTTTTTACGTAGATTACGAAAAAGCCTTTCGCTGGATAGAGTAACGAATCTTCTGTT ACTTCCGGTAATGATCGCTTTGCTCAGCAGGGTTTCTTTTTTCTCTTTACCGGATAACAAATTTACTTTTTTCATTGGTG CCATCGTTTTCTGGTACATACTTGTCGAGGGGTCATTTGAATCCAATCATTTTTTCAGACTTCATAGAAGTTATCGCTAT ACTGTTTTCATGATTGTGAGTATAGGTGTTTTCGTAAATTCCTTTATTTCAGTAGTCGTGCCCTCGGAATTCTCGCTGGT AATAACCCCTATCTTTCTTGGGACGGCCACCGTTACGATTTTAGTTGGCTATGAGGTGGGAATTGCGACGGGTTTGTTTA TGGCTTACCTTTCTGCTTTTTCTATTGGAACCATTGAGAGTTTCGTAATCTTTTCCACGATTGCTCTCATCAGCACATTG ACGACCAGAAATATACTGAGAAGGATAAATATTGCCCGGGCTGGATTCGAAACTGGTATTATCTTCGCTTTGATCCTCTT TGCACGTTCGTTTTTTGAGGTCAAATTGAGTTTGCTGCAGCTCGTGATCTCTTTCTTCAACCCTGTTTTTTCAGCAATAA TAGTAATCGGGATACTACCGTATATAGAATACGCAAGCAGAATATACTCGAATATAGGTCTTCTGGAGCTGGGGAATCTA TCCCACCCCCTTTTGAAGAGCCTGTCTTTAAGCGCGCCGGGAACGTATCAACACAGCGTTTCAATCGCGAACCTCGCTGA AATCGCGGCAGAAGAGATAGGTGCGAATCCTATACTTGCAAGGGTTGCGGCGTACTTTCACGATATAGGGAAATCTAAAA GACCTCAATATTTCACCGAAAACCAGCGTGGATTGAATCCCCATGAAAGCCTTAGCCCTTCTATGTCAAACCTTGTAATT AACGAGCATGTAAAATTAGGCGTCGAATTGGCGAAAAAGTACAGGCTTCCAATACTAGTCGAAGATGTCATTAGGGAACA TCACGGTACGCGGATTAAGAAATATTTCTATCACAAGGCGAAAACCTCTGGTGAGGATAATCCCGATTCCTTTAGATATC CTGGTCCCAAACCGAGGTTCAAAGAGTCGGGAATAATAATGCTTGCAGACTCTGTGGAAGCCGCTTTTAAGAGTTTGAAA GATCCGACGCCCGGAAAGATTCAGGAACTGGTAGAAGAGGTTGTTAACGGGATATACAATGAACGACAGCTCGACAAGAG CGGTTTGAATCTCGAAGATCTTGAAAAGATCATAGAAGCTTTTACTCGAGTCCTCATAAGTATGAGTCAGGCAAGGATAG AATATCCAAAAGAGAAGGTTGAAAAGGTGGTAAGAATCAATGAAAATAATCATAAATAA
Upstream 100 bases:
>100_bases GTTGACTTCGTTTACCTTACGGAGCATGATGTTGTTAGAAATCCAATTGTGAAAGAGATCATAAGAGCTTACGATGTCTA TGAAAGAGAGGCAAAGGAAA
Downstream 100 bases:
>100_bases TGCTACAAGCAAGGAAGTTGATACAGACAGATTAAAAGAATTGATCGTGAAAATATTGGAAAGTGAATTGGACGAATTAC CAGATTCAACTTTGAATGTA
Product: metal dependent phosphohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 472; Mature: 472
Protein sequence:
>472_residues MIAENSVGFLRRLRKSLSLDRVTNLLLLPVMIALLSRVSFFSLPDNKFTFFIGAIVFWYILVEGSFESNHFFRLHRSYRY TVFMIVSIGVFVNSFISVVVPSEFSLVITPIFLGTATVTILVGYEVGIATGLFMAYLSAFSIGTIESFVIFSTIALISTL TTRNILRRINIARAGFETGIIFALILFARSFFEVKLSLLQLVISFFNPVFSAIIVIGILPYIEYASRIYSNIGLLELGNL SHPLLKSLSLSAPGTYQHSVSIANLAEIAAEEIGANPILARVAAYFHDIGKSKRPQYFTENQRGLNPHESLSPSMSNLVI NEHVKLGVELAKKYRLPILVEDVIREHHGTRIKKYFYHKAKTSGEDNPDSFRYPGPKPRFKESGIIMLADSVEAAFKSLK DPTPGKIQELVEEVVNGIYNERQLDKSGLNLEDLEKIIEAFTRVLISMSQARIEYPKEKVEKVVRINENNHK
Sequences:
>Translated_472_residues MIAENSVGFLRRLRKSLSLDRVTNLLLLPVMIALLSRVSFFSLPDNKFTFFIGAIVFWYILVEGSFESNHFFRLHRSYRY TVFMIVSIGVFVNSFISVVVPSEFSLVITPIFLGTATVTILVGYEVGIATGLFMAYLSAFSIGTIESFVIFSTIALISTL TTRNILRRINIARAGFETGIIFALILFARSFFEVKLSLLQLVISFFNPVFSAIIVIGILPYIEYASRIYSNIGLLELGNL SHPLLKSLSLSAPGTYQHSVSIANLAEIAAEEIGANPILARVAAYFHDIGKSKRPQYFTENQRGLNPHESLSPSMSNLVI NEHVKLGVELAKKYRLPILVEDVIREHHGTRIKKYFYHKAKTSGEDNPDSFRYPGPKPRFKESGIIMLADSVEAAFKSLK DPTPGKIQELVEEVVNGIYNERQLDKSGLNLEDLEKIIEAFTRVLISMSQARIEYPKEKVEKVVRINENNHK >Mature_472_residues MIAENSVGFLRRLRKSLSLDRVTNLLLLPVMIALLSRVSFFSLPDNKFTFFIGAIVFWYILVEGSFESNHFFRLHRSYRY TVFMIVSIGVFVNSFISVVVPSEFSLVITPIFLGTATVTILVGYEVGIATGLFMAYLSAFSIGTIESFVIFSTIALISTL TTRNILRRINIARAGFETGIIFALILFARSFFEVKLSLLQLVISFFNPVFSAIIVIGILPYIEYASRIYSNIGLLELGNL SHPLLKSLSLSAPGTYQHSVSIANLAEIAAEEIGANPILARVAAYFHDIGKSKRPQYFTENQRGLNPHESLSPSMSNLVI NEHVKLGVELAKKYRLPILVEDVIREHHGTRIKKYFYHKAKTSGEDNPDSFRYPGPKPRFKESGIIMLADSVEAAFKSLK DPTPGKIQELVEEVVNGIYNERQLDKSGLNLEDLEKIIEAFTRVLISMSQARIEYPKEKVEKVVRINENNHK
Specific function: Unknown
COG id: COG1480
COG function: function code R; Predicted membrane-associated HD superfamily hydrolase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011624 - InterPro: IPR011621 - InterPro: IPR003607 - InterPro: IPR006675 [H]
Pfam domain/function: PF07698 7TM-7TMR_HD; PF07697 7TMR-HDED [H]
EC number: NA
Molecular weight: Translated: 53102; Mature: 53102
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAENSVGFLRRLRKSLSLDRVTNLLLLPVMIALLSRVSFFSLPDNKFTFFIGAIVFWYI CCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH LVEGSFESNHFFRLHRSYRYTVFMIVSIGVFVNSFISVVVPSEFSLVITPIFLGTATVTI HHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH LVGYEVGIATGLFMAYLSAFSIGTIESFVIFSTIALISTLTTRNILRRINIARAGFETGI EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH IFALILFARSFFEVKLSLLQLVISFFNPVFSAIIVIGILPYIEYASRIYSNIGLLELGNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC SHPLLKSLSLSAPGTYQHSVSIANLAEIAAEEIGANPILARVAAYFHDIGKSKRPQYFTE CHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCC NQRGLNPHESLSPSMSNLVINEHVKLGVELAKKYRLPILVEDVIREHHGTRIKKYFYHKA CCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHH KTSGEDNPDSFRYPGPKPRFKESGIIMLADSVEAAFKSLKDPTPGKIQELVEEVVNGIYN CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHCCCCCCHHHHHHHHHHHHHHHH ERQLDKSGLNLEDLEKIIEAFTRVLISMSQARIEYPKEKVEKVVRINENNHK HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure MIAENSVGFLRRLRKSLSLDRVTNLLLLPVMIALLSRVSFFSLPDNKFTFFIGAIVFWYI CCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH LVEGSFESNHFFRLHRSYRYTVFMIVSIGVFVNSFISVVVPSEFSLVITPIFLGTATVTI HHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH LVGYEVGIATGLFMAYLSAFSIGTIESFVIFSTIALISTLTTRNILRRINIARAGFETGI EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH IFALILFARSFFEVKLSLLQLVISFFNPVFSAIIVIGILPYIEYASRIYSNIGLLELGNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC SHPLLKSLSLSAPGTYQHSVSIANLAEIAAEEIGANPILARVAAYFHDIGKSKRPQYFTE CHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCC NQRGLNPHESLSPSMSNLVINEHVKLGVELAKKYRLPILVEDVIREHHGTRIKKYFYHKA CCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHH KTSGEDNPDSFRYPGPKPRFKESGIIMLADSVEAAFKSLKDPTPGKIQELVEEVVNGIYN CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHCCCCCCHHHHHHHHHHHHHHHH ERQLDKSGLNLEDLEKIIEAFTRVLISMSQARIEYPKEKVEKVVRINENNHK HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]