| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
Click here to switch to the map view.
The map label for this gene is 239618052
Identifier: 239618052
GI number: 239618052
Start: 1813163
End: 1813489
Strand: Direct
Name: 239618052
Synonym: Kole_1681
Alternate gene names: NA
Gene position: 1813163-1813489 (Clockwise)
Preceding gene: 239618051
Following gene: 239618053
Centisome position: 78.76
GC content: 37.92
Gene sequence:
>327_bases ATGATGAAAATGAAGAAGATGAGCGTATATCTTGGCGAAAAGGATAGGTACCAGCACAAGGAAATGTACGAACACATCCT TGAAATTTGCTACAACAACGGAATAAAAGGGGCAACGGTGATAAAAGGTATTATGGGATTCGGTGAAAAAAGACATATAC ACAGGAACGATTTTTTTACCCTTTCTGAAGATCTTCCAATTGTAGTGGAAGTAATTGATGTGGAAGAGAGGATAAATTTT CTGGCATCCAGGGTAAGAGAACTACCATTTGATGGGCTAATAGTGATTCAGGATGTAGAGGCATATTATGTAACAGGGAA AAAGTAG
Upstream 100 bases:
>100_bases TCATATCAAAGTCTTCCTTTAGAGGGGCGTTGTATTTTCTACTTACAATTTCACTCAGTGTAATGGCTGCATACTTCGGG TTCATTTTGGGGAGGGGTAG
Downstream 100 bases:
>100_bases GGAATTTGTTGCTTCCAATCATGATAGTATTGTATGTAGGTTATTTATAACGGAAGGATGTGGTTTTGTGAAGAAATTCC TGATTATTTTGGTTGTATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MMKMKKMSVYLGEKDRYQHKEMYEHILEICYNNGIKGATVIKGIMGFGEKRHIHRNDFFTLSEDLPIVVEVIDVEERINF LASRVRELPFDGLIVIQDVEAYYVTGKK
Sequences:
>Translated_108_residues MMKMKKMSVYLGEKDRYQHKEMYEHILEICYNNGIKGATVIKGIMGFGEKRHIHRNDFFTLSEDLPIVVEVIDVEERINF LASRVRELPFDGLIVIQDVEAYYVTGKK >Mature_108_residues MMKMKKMSVYLGEKDRYQHKEMYEHILEICYNNGIKGATVIKGIMGFGEKRHIHRNDFFTLSEDLPIVVEVIDVEERINF LASRVRELPFDGLIVIQDVEAYYVTGKK
Specific function: Unknown
COG id: COG1993
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0166 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003793 - InterPro: IPR011322 - InterPro: IPR015867 [H]
Pfam domain/function: PF02641 DUF190 [H]
EC number: NA
Molecular weight: Translated: 12671; Mature: 12671
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKMKKMSVYLGEKDRYQHKEMYEHILEICYNNGIKGATVIKGIMGFGEKRHIHRNDFFT CCCCCHHHEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCEE LSEDLPIVVEVIDVEERINFLASRVRELPFDGLIVIQDVEAYYVTGKK ECCCCCEEEEEECHHHHHHHHHHHHHHCCCCCEEEEEECEEEEEECCC >Mature Secondary Structure MMKMKKMSVYLGEKDRYQHKEMYEHILEICYNNGIKGATVIKGIMGFGEKRHIHRNDFFT CCCCCHHHEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCEE LSEDLPIVVEVIDVEERINFLASRVRELPFDGLIVIQDVEAYYVTGKK ECCCCCEEEEEECHHHHHHHHHHHHHHCCCCCEEEEEECEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]