| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
Click here to switch to the map view.
The map label for this gene is crcB [H]
Identifier: 239618051
GI number: 239618051
Start: 1812792
End: 1813166
Strand: Direct
Name: crcB [H]
Synonym: Kole_1680
Alternate gene names: 239618051
Gene position: 1812792-1813166 (Clockwise)
Preceding gene: 239618048
Following gene: 239618052
Centisome position: 78.74
GC content: 42.13
Gene sequence:
>375_bases ATGTCGAAGTTTATTTTGATAGGTGCGGGTGGAGCAGCGGGAGCGATAAGCAGATATCTTCTTTCTAAAGTGGTTAACTC CCTTGCACCGATTGGATTGATACCGTGGGGAACAGTACTGGTGAATGTTATTGGCTCTTTTTTGCTTGCTTTTCTCATGA TTTCATCTGCACAAAGGGTTAGTATAGATCCCCGATATATTTATCTTGTCGGAACCGGTTTTCTGGGGGCTTTTACGACT TTTTCGACCTTTTCATATGAGTTCATCACTCTCATATCAAAGTCTTCCTTTAGAGGGGCGTTGTATTTTCTACTTACAAT TTCACTCAGTGTAATGGCTGCATACTTCGGGTTCATTTTGGGGAGGGGTAGATGA
Upstream 100 bases:
>100_bases TATTCTTTATAGCTTGGTAGAATAGAAAGAAAAGGATTATCATATATTTCAGTGTAAGAAGCAGGTTCTGAATTGGTATG AAAAGTGAGGTGTTGTGGCT
Downstream 100 bases:
>100_bases TGAAAATGAAGAAGATGAGCGTATATCTTGGCGAAAAGGATAGGTACCAGCACAAGGAAATGTACGAACACATCCTTGAA ATTTGCTACAACAACGGAAT
Product: CrcB protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MSKFILIGAGGAAGAISRYLLSKVVNSLAPIGLIPWGTVLVNVIGSFLLAFLMISSAQRVSIDPRYIYLVGTGFLGAFTT FSTFSYEFITLISKSSFRGALYFLLTISLSVMAAYFGFILGRGR
Sequences:
>Translated_124_residues MSKFILIGAGGAAGAISRYLLSKVVNSLAPIGLIPWGTVLVNVIGSFLLAFLMISSAQRVSIDPRYIYLVGTGFLGAFTT FSTFSYEFITLISKSSFRGALYFLLTISLSVMAAYFGFILGRGR >Mature_123_residues SKFILIGAGGAAGAISRYLLSKVVNSLAPIGLIPWGTVLVNVIGSFLLAFLMISSAQRVSIDPRYIYLVGTGFLGAFTTF STFSYEFITLISKSSFRGALYFLLTISLSVMAAYFGFILGRGR
Specific function: Not Known. Overproduction Leads To Camphor Resistance And Chromosome Condensation; Deletion Increases Sensibility To Nucleoid Decondensation. Probably Interacts With The Heat-Shock Protein Cspe, Possibly Providing A Way To Anchor The Chromosome To The Mem
COG id: COG0239
COG function: function code D; Integral membrane protein possibly involved in chromosome condensation
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family [H]
Homologues:
Organism=Escherichia coli, GI1786842, Length=92, Percent_Identity=40.2173913043478, Blast_Score=64, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003691 [H]
Pfam domain/function: PF02537 CRCB [H]
EC number: NA
Molecular weight: Translated: 13339; Mature: 13208
Theoretical pI: Translated: 10.65; Mature: 10.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKFILIGAGGAAGAISRYLLSKVVNSLAPIGLIPWGTVLVNVIGSFLLAFLMISSAQRV CCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEE SIDPRYIYLVGTGFLGAFTTFSTFSYEFITLISKSSFRGALYFLLTISLSVMAAYFGFIL ECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH GRGR CCCC >Mature Secondary Structure SKFILIGAGGAAGAISRYLLSKVVNSLAPIGLIPWGTVLVNVIGSFLLAFLMISSAQRV CCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEE SIDPRYIYLVGTGFLGAFTTFSTFSYEFITLISKSSFRGALYFLLTISLSVMAAYFGFIL ECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH GRGR CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]