| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is mviN [H]
Identifier: 239618007
GI number: 239618007
Start: 1754938
End: 1756443
Strand: Direct
Name: mviN [H]
Synonym: Kole_1635
Alternate gene names: 239618007
Gene position: 1754938-1756443 (Clockwise)
Preceding gene: 239618006
Following gene: 239618008
Centisome position: 76.23
GC content: 34.99
Gene sequence:
>1506_bases TTGAGTAAGAAATATGTTCAGTCAGTAGCGGCTGGTGCTATATATATAACATTTTTCACATTAATTTCCAAAGTACTTGG ATTCTTTCGAGAAGTACTTGTAGCTGATCTTTTTGGAACTTCATGGCGATTGGATGCAGTAATGATTGCTCTTACTCCTG TCCAGATAATATCTGGAGTAATATCTGCTGGTTTAATAACAGTTTTCATCCCCAAATATATAAAAATTAAAGATGCCAGC ATTGAGGAAGCAAAGCACTATGCCTGGGCTATCATAGTTATTTTTGGCCTTTTGTTTTTAGTTTCAGGTATCCTTCTATA TTTCTTTTCAGAGCAGTTTATAAAGCTTTTTGCTCCGGGATTTTCCCGAAAAATTGTTGAATACTCAGCAAGAAAGTTAA AAGGCTTGTCCGTGCTTCCTCTAATAATGGGTATTCAGCAAATACTTTCAGGCATCCTCCGGGCAGAAAGGCGATTTTTG CAATATACGTTGGCCCAGCTCTTTTTCAATATAGTTTCTATTCCGGTTATCTATTTTACTGCTCCTTACTTTAACGAAGC TTCATATATACTTGCATGGGTTATTGGAAACTTAGTTGTTAGCTTAGTACTACTCCTTTTTTCAATTGGACAAATCCAGC CTCATCTCAGATTATTTTCAGACGATATAAGAAATACTCTTGTTCTCACATTTCCTCTTATCCTATCCAACGGTCTAGGT CAAATTAACAATATAGTTGATAAGGCATTTGTTTCATTCTTGCCGTCAGGGCGTGTATCCGGTATGCAATATGCTGATGC TCTTCTTGGAATAGTATCTGGGGTTTTTTTAATGAGTTTTATGACTACAACTCAAACCGAATTATCAGAGTTTTTGGTAA GAAAAGATTTTGCAAAAGCTGAAGAAAGAATGAAGAAAACAACGCACACGCTTCTCAGTCTTTCTATTCCAATAGTGTTG TGGATAACGTTCATGGGGGAGCCTTTAATTAAGCTGATTTACGAGCATGGAAATTTTACGAATGAATCAACATCGATAGT TGTAATAGCTTTGATAGGATATAGTGCTAGAACAATAATATTACCAATTGGGCTACTCTCAAGACAATATTTCCTTATTC AAGGGAAAATAAAATTTGCCACTTATTTGACGGTGCTTTCAGTGTTGACTAATGTTTTTTTTGATTGGTTGTTAATTAAA CCATTTGGAGTAGGCGGCATTACTGGTAGTACATCGATTGTAACTTTTATAAATACAACTATCTGGATATTGTTGGTTAG AAAGGAAGGAATTTCCTTTTTGCCTTGGAAAAGAATAATAACGCTTATAGTGAGTTGTGGAACCATTATCATTACCTCAC TGTTGATTAAAGCGTTGACTAATGATTTGATATACATAATTTTTGGCAATTTTGCTTTTGCGATTCTTACAATCTGGTCT ACTTGGGATATAACAACGTTTATCATAAGAAAAACATTTAGCAAGTTACTGAGACCGAAAAAGTGA
Upstream 100 bases:
>100_bases CAATATTGCTCTTGAAGCTAAAGCGGATATTCAACGATTTATCAGAGATTATTTAAAGAAACAACATCATGTTTAAGTAT ACAACGAAGGGGATTAGCAT
Downstream 100 bases:
>100_bases TTAAGTAATAAGTCATTGAAAAGGAAATATAAAAAAAGAACCTTATCTACATGAAACTTCTTCAGAAAAACGAAGAAGAG CTATACAGTAAATTCATTCT
Product: virulence factor MVIN family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 501; Mature: 500
Protein sequence:
>501_residues MSKKYVQSVAAGAIYITFFTLISKVLGFFREVLVADLFGTSWRLDAVMIALTPVQIISGVISAGLITVFIPKYIKIKDAS IEEAKHYAWAIIVIFGLLFLVSGILLYFFSEQFIKLFAPGFSRKIVEYSARKLKGLSVLPLIMGIQQILSGILRAERRFL QYTLAQLFFNIVSIPVIYFTAPYFNEASYILAWVIGNLVVSLVLLLFSIGQIQPHLRLFSDDIRNTLVLTFPLILSNGLG QINNIVDKAFVSFLPSGRVSGMQYADALLGIVSGVFLMSFMTTTQTELSEFLVRKDFAKAEERMKKTTHTLLSLSIPIVL WITFMGEPLIKLIYEHGNFTNESTSIVVIALIGYSARTIILPIGLLSRQYFLIQGKIKFATYLTVLSVLTNVFFDWLLIK PFGVGGITGSTSIVTFINTTIWILLVRKEGISFLPWKRIITLIVSCGTIIITSLLIKALTNDLIYIIFGNFAFAILTIWS TWDITTFIIRKTFSKLLRPKK
Sequences:
>Translated_501_residues MSKKYVQSVAAGAIYITFFTLISKVLGFFREVLVADLFGTSWRLDAVMIALTPVQIISGVISAGLITVFIPKYIKIKDAS IEEAKHYAWAIIVIFGLLFLVSGILLYFFSEQFIKLFAPGFSRKIVEYSARKLKGLSVLPLIMGIQQILSGILRAERRFL QYTLAQLFFNIVSIPVIYFTAPYFNEASYILAWVIGNLVVSLVLLLFSIGQIQPHLRLFSDDIRNTLVLTFPLILSNGLG QINNIVDKAFVSFLPSGRVSGMQYADALLGIVSGVFLMSFMTTTQTELSEFLVRKDFAKAEERMKKTTHTLLSLSIPIVL WITFMGEPLIKLIYEHGNFTNESTSIVVIALIGYSARTIILPIGLLSRQYFLIQGKIKFATYLTVLSVLTNVFFDWLLIK PFGVGGITGSTSIVTFINTTIWILLVRKEGISFLPWKRIITLIVSCGTIIITSLLIKALTNDLIYIIFGNFAFAILTIWS TWDITTFIIRKTFSKLLRPKK >Mature_500_residues SKKYVQSVAAGAIYITFFTLISKVLGFFREVLVADLFGTSWRLDAVMIALTPVQIISGVISAGLITVFIPKYIKIKDASI EEAKHYAWAIIVIFGLLFLVSGILLYFFSEQFIKLFAPGFSRKIVEYSARKLKGLSVLPLIMGIQQILSGILRAERRFLQ YTLAQLFFNIVSIPVIYFTAPYFNEASYILAWVIGNLVVSLVLLLFSIGQIQPHLRLFSDDIRNTLVLTFPLILSNGLGQ INNIVDKAFVSFLPSGRVSGMQYADALLGIVSGVFLMSFMTTTQTELSEFLVRKDFAKAEERMKKTTHTLLSLSIPIVLW ITFMGEPLIKLIYEHGNFTNESTSIVVIALIGYSARTIILPIGLLSRQYFLIQGKIKFATYLTVLSVLTNVFFDWLLIKP FGVGGITGSTSIVTFINTTIWILLVRKEGISFLPWKRIITLIVSCGTIIITSLLIKALTNDLIYIIFGNFAFAILTIWST WDITTFIIRKTFSKLLRPKK
Specific function: Unknown
COG id: COG0728
COG function: function code R; Uncharacterized membrane protein, putative virulence factor
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mviN family [H]
Homologues:
Organism=Escherichia coli, GI1787309, Length=434, Percent_Identity=26.2672811059908, Blast_Score=107, Evalue=2e-24,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004268 [H]
Pfam domain/function: PF03023 MVIN [H]
EC number: NA
Molecular weight: Translated: 56288; Mature: 56157
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKYVQSVAAGAIYITFFTLISKVLGFFREVLVADLFGTSWRLDAVMIALTPVQIISGV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH ISAGLITVFIPKYIKIKDASIEEAKHYAWAIIVIFGLLFLVSGILLYFFSEQFIKLFAPG HHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FSRKIVEYSARKLKGLSVLPLIMGIQQILSGILRAERRFLQYTLAQLFFNIVSIPVIYFT HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE APYFNEASYILAWVIGNLVVSLVLLLFSIGQIQPHLRLFSDDIRNTLVLTFPLILSNGLG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCH QINNIVDKAFVSFLPSGRVSGMQYADALLGIVSGVFLMSFMTTTQTELSEFLVRKDFAKA HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EERMKKTTHTLLSLSIPIVLWITFMGEPLIKLIYEHGNFTNESTSIVVIALIGYSARTII HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHE LPIGLLSRQYFLIQGKIKFATYLTVLSVLTNVFFDWLLIKPFGVGGITGSTSIVTFINTT EEHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH IWILLVRKEGISFLPWKRIITLIVSCGTIIITSLLIKALTNDLIYIIFGNFAFAILTIWS HHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHH TWDITTFIIRKTFSKLLRPKK HHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SKKYVQSVAAGAIYITFFTLISKVLGFFREVLVADLFGTSWRLDAVMIALTPVQIISGV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH ISAGLITVFIPKYIKIKDASIEEAKHYAWAIIVIFGLLFLVSGILLYFFSEQFIKLFAPG HHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FSRKIVEYSARKLKGLSVLPLIMGIQQILSGILRAERRFLQYTLAQLFFNIVSIPVIYFT HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE APYFNEASYILAWVIGNLVVSLVLLLFSIGQIQPHLRLFSDDIRNTLVLTFPLILSNGLG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCH QINNIVDKAFVSFLPSGRVSGMQYADALLGIVSGVFLMSFMTTTQTELSEFLVRKDFAKA HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EERMKKTTHTLLSLSIPIVLWITFMGEPLIKLIYEHGNFTNESTSIVVIALIGYSARTII HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHE LPIGLLSRQYFLIQGKIKFATYLTVLSVLTNVFFDWLLIKPFGVGGITGSTSIVTFINTT EEHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH IWILLVRKEGISFLPWKRIITLIVSCGTIIITSLLIKALTNDLIYIIFGNFAFAILTIWS HHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHH TWDITTFIIRKTFSKLLRPKK HHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8200538; 11677609 [H]