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The map label for this gene is secF [H]

Identifier: 239617984

GI number: 239617984

Start: 1729073

End: 1729987

Strand: Direct

Name: secF [H]

Synonym: Kole_1612

Alternate gene names: 239617984

Gene position: 1729073-1729987 (Clockwise)

Preceding gene: 239617983

Following gene: 239617985

Centisome position: 75.11

GC content: 42.08

Gene sequence:

>915_bases
ATGAGATACAACTTTGATTTTGTTGGTAAAAGAAAGGGATTCCTTACTCTATCATTGGTGCTTGTAGCATTGACGCTCGT
CATGGTGTTCACTAAGGGTTTTAACCTCGGCGTGGATTTCACCGGCGGTATAGAGATCAGCGTTACAGTTTCAGATTTAG
AAATGTCTGTCGGCGAGATGAGAGGACTTTTGAGTTCCGTGAATCCCATCTTTGAATCTGCTCGAATCATCAAGCAGAAG
CCGTTAACTCAAGAAGGTAGTTCTGATCAGCTTGCCAGGTTCTCTATTGTTGTCAATTCGGAAAATGAGCAGGGGCTCAA
AGAGGATATCATTAAAGCGCTTACTTCAAAGGGAGTAAAAAGCAGCAATATTCTTTCGGTAAACAGAATCTCAGGGTTCG
CTGCTCAGGAGATCAAAGGGTATGCATGGACAGCGGTTATCGTTGCTGTTGCTCTTATATTGCTTTACATAACAATACGT
TTCAGGTTCTCTTTTGGTATTGGTGCAATTATCGCTCTTGTTCACGATATACTCATAACACTCGGTTTCTATAGTATCTT
TGGCATAGAAATAAACGCACCTGTGGTTGCCGCACTTCTAACGTTGCTGGGGTATTCTCTTAATGATACTATTGTTGTAT
ATGACAGGGTCAGGGAAAATCTCCGTAAGCTTAGAGGGAAAAGCATAGAGGAAATCGTCAACAGGAGCATCAACGAGGTT
ATCGTTAGATCTTTGAATACGTCTTTGACAACGTTCACAGCCGTTCTGATGCTCTTTATATTTTCTGGAGAAGTTCTTAG
ACCCTTTGCCTTTGGAATCATGGTAGGTGTTGTAGTCGGTACATATTCTTCGTTGCACATAGCGGCACCGGTTGTCATTA
CCTGGCTCGGACGCTCGAAAGTAAAGATAAAATAA

Upstream 100 bases:

>100_bases
CTAACCTGGTTGCCTCCAGAACAATGCTCGTTGGAATGGCCGGAAGCATCAATGCTGCACGCTACGTAAAGGCTACCGGC
GGTGAAGGGAGCGATAAAAG

Downstream 100 bases:

>100_bases
GGGTAAAGGCTATTGAAATTATAATTGGTGTAGTGTATAATCTTTGACGAAGTGGGGTCGTAGCGCAGCTGGGAGCGCGT
CACAATGGCATTGTGAAGGC

Product: protein-export membrane protein SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MRYNFDFVGKRKGFLTLSLVLVALTLVMVFTKGFNLGVDFTGGIEISVTVSDLEMSVGEMRGLLSSVNPIFESARIIKQK
PLTQEGSSDQLARFSIVVNSENEQGLKEDIIKALTSKGVKSSNILSVNRISGFAAQEIKGYAWTAVIVAVALILLYITIR
FRFSFGIGAIIALVHDILITLGFYSIFGIEINAPVVAALLTLLGYSLNDTIVVYDRVRENLRKLRGKSIEEIVNRSINEV
IVRSLNTSLTTFTAVLMLFIFSGEVLRPFAFGIMVGVVVGTYSSLHIAAPVVITWLGRSKVKIK

Sequences:

>Translated_304_residues
MRYNFDFVGKRKGFLTLSLVLVALTLVMVFTKGFNLGVDFTGGIEISVTVSDLEMSVGEMRGLLSSVNPIFESARIIKQK
PLTQEGSSDQLARFSIVVNSENEQGLKEDIIKALTSKGVKSSNILSVNRISGFAAQEIKGYAWTAVIVAVALILLYITIR
FRFSFGIGAIIALVHDILITLGFYSIFGIEINAPVVAALLTLLGYSLNDTIVVYDRVRENLRKLRGKSIEEIVNRSINEV
IVRSLNTSLTTFTAVLMLFIFSGEVLRPFAFGIMVGVVVGTYSSLHIAAPVVITWLGRSKVKIK
>Mature_304_residues
MRYNFDFVGKRKGFLTLSLVLVALTLVMVFTKGFNLGVDFTGGIEISVTVSDLEMSVGEMRGLLSSVNPIFESARIIKQK
PLTQEGSSDQLARFSIVVNSENEQGLKEDIIKALTSKGVKSSNILSVNRISGFAAQEIKGYAWTAVIVAVALILLYITIR
FRFSFGIGAIIALVHDILITLGFYSIFGIEINAPVVAALLTLLGYSLNDTIVVYDRVRENLRKLRGKSIEEIVNRSINEV
IVRSLNTSLTTFTAVLMLFIFSGEVLRPFAFGIMVGVVVGTYSSLHIAAPVVITWLGRSKVKIK

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=294, Percent_Identity=32.9931972789116, Blast_Score=159, Evalue=3e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022646
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 33335; Mature: 33335

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYNFDFVGKRKGFLTLSLVLVALTLVMVFTKGFNLGVDFTGGIEISVTVSDLEMSVGEM
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEEEHHHHHHHHHHH
RGLLSSVNPIFESARIIKQKPLTQEGSSDQLARFSIVVNSENEQGLKEDIIKALTSKGVK
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHCCCC
SSNILSVNRISGFAAQEIKGYAWTAVIVAVALILLYITIRFRFSFGIGAIIALVHDILIT
CCCCEEEHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGFYSIFGIEINAPVVAALLTLLGYSLNDTIVVYDRVRENLRKLRGKSIEEIVNRSINEV
HHHHHHHEEEECCHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCHHHHHHCCHHHH
IVRSLNTSLTTFTAVLMLFIFSGEVLRPFAFGIMVGVVVGTYSSLHIAAPVVITWLGRSK
HHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEECCCCC
VKIK
EEEC
>Mature Secondary Structure
MRYNFDFVGKRKGFLTLSLVLVALTLVMVFTKGFNLGVDFTGGIEISVTVSDLEMSVGEM
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEEEHHHHHHHHHHH
RGLLSSVNPIFESARIIKQKPLTQEGSSDQLARFSIVVNSENEQGLKEDIIKALTSKGVK
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHCCCC
SSNILSVNRISGFAAQEIKGYAWTAVIVAVALILLYITIRFRFSFGIGAIIALVHDILIT
CCCCEEEHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGFYSIFGIEINAPVVAALLTLLGYSLNDTIVVYDRVRENLRKLRGKSIEEIVNRSINEV
HHHHHHHEEEECCHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCHHHHHHCCHHHH
IVRSLNTSLTTFTAVLMLFIFSGEVLRPFAFGIMVGVVVGTYSSLHIAAPVVITWLGRSK
HHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEECCCCC
VKIK
EEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA