| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239617916
Identifier: 239617916
GI number: 239617916
Start: 1653860
End: 1655140
Strand: Direct
Name: 239617916
Synonym: Kole_1544
Alternate gene names: NA
Gene position: 1653860-1655140 (Clockwise)
Preceding gene: 239617915
Following gene: 239617917
Centisome position: 71.84
GC content: 41.92
Gene sequence:
>1281_bases ATGAGTATCCTCGGGATAGTTGTTGAATACAATCCTTTCCACAATGGGCATCTTTTCCATTTGAAAAAGGCGAAAGAGCT CATAAACCCAGACCTGACAATTGCCGTTATGAGCGGCAACTTTGTTCAGCGTGGGGAACCAGCTATAATGGACAACTATT CCCGGGCTGAAATCGCATTAAAGGCTGGCATTGACATTGTGGTACAGCTTCCTGTTGTTTATTCCGTTCAGGATGCAGGT GGGTTTGCCCTAGGTTCTGTATGGACGTTGTCCCTTTTAGGTGTTACTGACATCGTTTTTGGCAGCGAAACGGGAAACAT GAAACTTCTAGATGTTCTTTCCGATATTTTGATAGAAGAACCAACCGTATACGTGAAGTTGTTGAAGCAGCATCTGAAAA CAGGTTTGTCTTTTCCAAATGCGAGGAAGGCAGCACTAAAGGACTATCTAAAGCTTCATCTTAGTGATTTTGCCGAAAGT ATCCAAGAGATAGAAAGATCTAACAATATCCTGGGGCTCGAATATTTGCGTGCTATCAAACAGATCAGAAGTGATATTAC GCCGCACAGCATAGTGAGAACGGGTGCTGATTACAACGACCCTTACTTTAAAGGCAGGTTTTCGAGCGCTACTGCCATCA GGAAGTTAATCATAACCGGGCAGTGGGAGAAGGTCAAACAAGCTGTTCCGGATTATTCTTACGCCATTATAAAAAGAGAG TGTGCATTGAAGAAATGCCCCGTACACCTTGAAAAAATGGGACGATTCATTCTTGGCCTGTTGAGACGGCTGGATAGGGA AGATTTCAAGAATTACTACGGGTTTACTGAAGGGCTTGATGCAAGGTTCGTTCGTTGTTCTAGACAATGTGGAGAAATAT CCGAATTTCTTGAATGTGTGAAGGCCAAACGCTTTACCTTTACAAGGTTGAAGAGGCTGTTGATGAACGTGATTCTCAAA CTTTCCCCGAAGCTGATAGAGCAGTCAAACAAACAGGGGCCACAGTATATTAGAGTACTTGGATTCAATGAAAATGGAAG ATCGCACCTTTCAAGAATAAAGAAAAAACTGAAAGTTCCATTATTGACTACCCCATCCACATGGAAGCGGGTTATGTATA AAGCGATATCCGGTGATTTTGAGATAGACCAGGATCTTTTCCAGTTACAGATGAAGAGAGACATAATGGCAGCGGATATT TATTCTCTCTTTTTTGATGATGTTAAGGTTATAAAAGCCTCGAATGAAATGAAAAGAAGGATAATCTATATCAGGGGTTG A
Upstream 100 bases:
>100_bases AGGGTTATTATAATTTCTTACGCTATTTATAACGATGATGAGTATAAACCTCCGAAGATTGTGAAGGTTACTGAGAAAAA CGAACCGATCGAGAAGTAAC
Downstream 100 bases:
>100_bases TATTATCTTTGTAAAAGTGGCCATATCGGGTTCCCCTCTTCTCGATACTTTCACCTATCATACTGATTTCCCATTAACTC CGGGAGAAAGAGTTGTTGTT
Product: cytidyltransferase-related domain protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 426; Mature: 425
Protein sequence:
>426_residues MSILGIVVEYNPFHNGHLFHLKKAKELINPDLTIAVMSGNFVQRGEPAIMDNYSRAEIALKAGIDIVVQLPVVYSVQDAG GFALGSVWTLSLLGVTDIVFGSETGNMKLLDVLSDILIEEPTVYVKLLKQHLKTGLSFPNARKAALKDYLKLHLSDFAES IQEIERSNNILGLEYLRAIKQIRSDITPHSIVRTGADYNDPYFKGRFSSATAIRKLIITGQWEKVKQAVPDYSYAIIKRE CALKKCPVHLEKMGRFILGLLRRLDREDFKNYYGFTEGLDARFVRCSRQCGEISEFLECVKAKRFTFTRLKRLLMNVILK LSPKLIEQSNKQGPQYIRVLGFNENGRSHLSRIKKKLKVPLLTTPSTWKRVMYKAISGDFEIDQDLFQLQMKRDIMAADI YSLFFDDVKVIKASNEMKRRIIYIRG
Sequences:
>Translated_426_residues MSILGIVVEYNPFHNGHLFHLKKAKELINPDLTIAVMSGNFVQRGEPAIMDNYSRAEIALKAGIDIVVQLPVVYSVQDAG GFALGSVWTLSLLGVTDIVFGSETGNMKLLDVLSDILIEEPTVYVKLLKQHLKTGLSFPNARKAALKDYLKLHLSDFAES IQEIERSNNILGLEYLRAIKQIRSDITPHSIVRTGADYNDPYFKGRFSSATAIRKLIITGQWEKVKQAVPDYSYAIIKRE CALKKCPVHLEKMGRFILGLLRRLDREDFKNYYGFTEGLDARFVRCSRQCGEISEFLECVKAKRFTFTRLKRLLMNVILK LSPKLIEQSNKQGPQYIRVLGFNENGRSHLSRIKKKLKVPLLTTPSTWKRVMYKAISGDFEIDQDLFQLQMKRDIMAADI YSLFFDDVKVIKASNEMKRRIIYIRG >Mature_425_residues SILGIVVEYNPFHNGHLFHLKKAKELINPDLTIAVMSGNFVQRGEPAIMDNYSRAEIALKAGIDIVVQLPVVYSVQDAGG FALGSVWTLSLLGVTDIVFGSETGNMKLLDVLSDILIEEPTVYVKLLKQHLKTGLSFPNARKAALKDYLKLHLSDFAESI QEIERSNNILGLEYLRAIKQIRSDITPHSIVRTGADYNDPYFKGRFSSATAIRKLIITGQWEKVKQAVPDYSYAIIKREC ALKKCPVHLEKMGRFILGLLRRLDREDFKNYYGFTEGLDARFVRCSRQCGEISEFLECVKAKRFTFTRLKRLLMNVILKL SPKLIEQSNKQGPQYIRVLGFNENGRSHLSRIKKKLKVPLLTTPSTWKRVMYKAISGDFEIDQDLFQLQMKRDIMAADIY SLFFDDVKVIKASNEMKRRIIYIRG
Specific function: Unknown
COG id: COG1323
COG function: function code R; Predicted nucleotidyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0348 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1544_KOSOT (C5CEQ4)
Other databases:
- EMBL: CP001634 - RefSeq: YP_002941238.1 - ProteinModelPortal: C5CEQ4 - GeneID: 7968621 - GenomeReviews: CP001634_GR - KEGG: kol:Kole_1544 - HAMAP: MF_01539 - InterPro: IPR004821 - InterPro: IPR014729 - InterPro: IPR008513 - Gene3D: G3DSA:3.40.50.620 - TIGRFAMs: TIGR00125
Pfam domain/function: PF05636 DUF795
EC number: NA
Molecular weight: Translated: 48681; Mature: 48549
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSILGIVVEYNPFHNGHLFHLKKAKELINPDLTIAVMSGNFVQRGEPAIMDNYSRAEIAL CCEEEEEEEECCCCCCCEEEEHHHHHHCCCCEEEEEEECCCCCCCCCHHHCCCCHHHEEH KAGIDIVVQLPVVYSVQDAGGFALGSVWTLSLLGVTDIVFGSETGNMKLLDVLSDILIEE CCCCEEEEEECEEEEEECCCCEEHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHCC PTVYVKLLKQHLKTGLSFPNARKAALKDYLKLHLSDFAESIQEIERSNNILGLEYLRAIK CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHH QIRSDITPHSIVRTGADYNDPYFKGRFSSATAIRKLIITGQWEKVKQAVPDYSYAIIKRE HHHHCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHH CALKKCPVHLEKMGRFILGLLRRLDREDFKNYYGFTEGLDARFVRCSRQCGEISEFLECV HHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH KAKRFTFTRLKRLLMNVILKLSPKLIEQSNKQGPQYIRVLGFNENGRSHLSRIKKKLKVP HHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCC LLTTPSTWKRVMYKAISGDFEIDQDLFQLQMKRDIMAADIYSLFFDDVKVIKASNEMKRR EECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCEE IIYIRG EEEEEC >Mature Secondary Structure SILGIVVEYNPFHNGHLFHLKKAKELINPDLTIAVMSGNFVQRGEPAIMDNYSRAEIAL CEEEEEEEECCCCCCCEEEEHHHHHHCCCCEEEEEEECCCCCCCCCHHHCCCCHHHEEH KAGIDIVVQLPVVYSVQDAGGFALGSVWTLSLLGVTDIVFGSETGNMKLLDVLSDILIEE CCCCEEEEEECEEEEEECCCCEEHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHCC PTVYVKLLKQHLKTGLSFPNARKAALKDYLKLHLSDFAESIQEIERSNNILGLEYLRAIK CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHH QIRSDITPHSIVRTGADYNDPYFKGRFSSATAIRKLIITGQWEKVKQAVPDYSYAIIKRE HHHHCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHH CALKKCPVHLEKMGRFILGLLRRLDREDFKNYYGFTEGLDARFVRCSRQCGEISEFLECV HHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH KAKRFTFTRLKRLLMNVILKLSPKLIEQSNKQGPQYIRVLGFNENGRSHLSRIKKKLKVP HHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCC LLTTPSTWKRVMYKAISGDFEIDQDLFQLQMKRDIMAADIYSLFFDDVKVIKASNEMKRR EECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCEE IIYIRG EEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA