| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239617671
Identifier: 239617671
GI number: 239617671
Start: 1380343
End: 1380747
Strand: Direct
Name: 239617671
Synonym: Kole_1295
Alternate gene names: NA
Gene position: 1380343-1380747 (Clockwise)
Preceding gene: 239617670
Following gene: 239617677
Centisome position: 59.96
GC content: 36.05
Gene sequence:
>405_bases TTGCCAAAAACAATAGAAGAGAATGAAAAATACCTCGAGGTTCTTACCTTCATTTTCAAAAAGATTGACATAGGATCTAT AAAGGCTTTTTCGTCAGTCTTAACTCTTGCTGAAGTGCTGGTGCGACCATTTGTTAAAGGAGAACAGCATCTTATCAATG AGTATATTAGTATTTTTACAAGCTGTGAAAACCTTTCTTTGATCCCTGTGGAAAAAGAAATAGCAGTTTTGGCCGCCAAA ATTAGAGCTAAGAATGGTTTGAAACTTCCTGATGCCCTCCATTTTGCGACAGCCAAAGTATATAAGTGCGAGTTGTTTAT CACAAATGACAAACATTTCAATGGGATCTCAGATTCTGAGATACAGATAGTTTTACTTGATGATCTTCTGGATAAGAATG TCTGA
Upstream 100 bases:
>100_bases TTACAGGCAGGAGTTACCGATTGGAACATTCGAGCATTAAGGCTTAGTTTTTTTACCCCGGGTGCTGGCTTTTTATTTTT CCGAATGCTGGATTTTTATA
Downstream 100 bases:
>100_bases AGGGCGGAGTTACGCTCTGGGGACTTATGAACGCAGTAAAAACCGTTGTTGGTTGTAGGTTGTGGGTTGTACGTGACGAT CGAAATCAGAAATTTGGTAC
Product: PilT protein
Products: NA
Alternate protein names: PilT Protein-Like Protein; PilT Domain-Containing Protein; PilT Protein
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MPKTIEENEKYLEVLTFIFKKIDIGSIKAFSSVLTLAEVLVRPFVKGEQHLINEYISIFTSCENLSLIPVEKEIAVLAAK IRAKNGLKLPDALHFATAKVYKCELFITNDKHFNGISDSEIQIVLLDDLLDKNV
Sequences:
>Translated_134_residues MPKTIEENEKYLEVLTFIFKKIDIGSIKAFSSVLTLAEVLVRPFVKGEQHLINEYISIFTSCENLSLIPVEKEIAVLAAK IRAKNGLKLPDALHFATAKVYKCELFITNDKHFNGISDSEIQIVLLDDLLDKNV >Mature_133_residues PKTIEENEKYLEVLTFIFKKIDIGSIKAFSSVLTLAEVLVRPFVKGEQHLINEYISIFTSCENLSLIPVEKEIAVLAAKI RAKNGLKLPDALHFATAKVYKCELFITNDKHFNGISDSEIQIVLLDDLLDKNV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15123; Mature: 14992
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKTIEENEKYLEVLTFIFKKIDIGSIKAFSSVLTLAEVLVRPFVKGEQHLINEYISIFT CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH SCENLSLIPVEKEIAVLAAKIRAKNGLKLPDALHFATAKVYKCELFITNDKHFNGISDSE CCCCCEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEEEEEEEEECCCCCCCCCCCC IQIVLLDDLLDKNV EEEEEECHHHCCCC >Mature Secondary Structure PKTIEENEKYLEVLTFIFKKIDIGSIKAFSSVLTLAEVLVRPFVKGEQHLINEYISIFT CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH SCENLSLIPVEKEIAVLAAKIRAKNGLKLPDALHFATAKVYKCELFITNDKHFNGISDSE CCCCCEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEEEEEEEEECCCCCCCCCCCC IQIVLLDDLLDKNV EEEEEECHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA