| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239617663
Identifier: 239617663
GI number: 239617663
Start: 1370892
End: 1372160
Strand: Reverse
Name: 239617663
Synonym: Kole_1287
Alternate gene names: NA
Gene position: 1372160-1370892 (Counterclockwise)
Preceding gene: 239617664
Following gene: 239617662
Centisome position: 59.6
GC content: 32.86
Gene sequence:
>1269_bases ATGAATCGGTTGTTTTCTGGAGTAAGGGACAATTTCAGTTTCTTTATTTATTCAATGATATATATATATTTATTCGGTGT TGGTTATTTAATGTCAACATTCATGAACTTTTTTTATGGATATCAAACTATTGGAAGAAATGAGACAGTTTATATTATGA TAATTAATTATCTTCTGGCTGTTATTGCCTACAAAATTGCTCGTTCTGTTTTACCTAAACGCACTTACCCTATAGTATTG AATATAACGAGATTTAGTTATACAACTTCTTCACTGGCACTCCTTACAGTTGGTGTTATGCTTGTTTTCAATAGATTGTA TCAGATGGGGTTCAAACCATTCTGGGTTTATGGTGGAGTCCCAATAACAGAATCTGGATTAGTTGGTGTAGGATTAACTG TTTTGTCAATTGCATCGGGTCTTGATTGTCTATACTTATTTTCTAGAAAATCTTCGAATAGTAAAATCTTTATCTTGTTG TTATTTATAGCAAAATTCTCAATTTTAGTACTTTTCGGAAGATCGCGAAGCTTGTTTTTGTGGTTAGGAATAATGTTTGT ATATTTCCTTGTAATAATGGGTATTGGAAATCATCGTTTTAGAACCATACTCTTTATGTTTATAATTATAGCGTTTTTGT CTATGATGTTTTATCGGATATTGCTTATAAAAAGCAAAATAGATGATCCTGTTCTTATTTCCAGAATCACTCTCGCATCT TTAGCTCCCGAATTTCGAGATTTTTCGAATTTCATTAACAAATATGATCCGAATTCCAACACTGAAACAGGAAAAAGAAT ATTGGGAAATATGATCGCGACACTGCTTCCAGACGAAGTTTGGCAGTTTCTCGGTGTGAATAAATACGAAATCGGTTTAT TCAATAGAGGGAGTCTGTTTCATTCAATTCTTTTTGGAAGTCAAAATAGCACGGTTGGTGTAAGAATAACATATTTCGGA GAGATGTACATTGTTAATGGGATCTATGGTATATTCCTTGGAACACTGATAATAAGTACATTACTAGGGCTCCTAAGCAA ATATAACTATTCGCTATTTACATGGTTAATGACAATAAACCTTGCGATCTCCCAATTTAATGGTCTTAACGTCATTACTT TAAGGATCATTCCTATACTTATTGTTGTGTTAATCGCTGAATTTAATTGGGCTGTTGCTATTAAAGAGTTATACTATAAG TCTGGTCATACTCTAGGAGGTCAGAATGAACGATTATCAGCAATTGGTAGAGAAAGTGCTGGAGTTTGA
Upstream 100 bases:
>100_bases TTTTAGAAAATAATTTGTATTGGGAGAACTATTTTGCTTATTACAGGAAAATTTTCTCCTAAAAATTTTATACAGACTTT TCTAAAGTCGGGTGAGCGTG
Downstream 100 bases:
>100_bases AAAGAAAAATGAAGATGTACTTCTAGCAGAGAAAATTGAGGATAAACTTATTTACCCAATAATTCGCTGGAATCTTCTTA GTAGTATAATTTATTCATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MNRLFSGVRDNFSFFIYSMIYIYLFGVGYLMSTFMNFFYGYQTIGRNETVYIMIINYLLAVIAYKIARSVLPKRTYPIVL NITRFSYTTSSLALLTVGVMLVFNRLYQMGFKPFWVYGGVPITESGLVGVGLTVLSIASGLDCLYLFSRKSSNSKIFILL LFIAKFSILVLFGRSRSLFLWLGIMFVYFLVIMGIGNHRFRTILFMFIIIAFLSMMFYRILLIKSKIDDPVLISRITLAS LAPEFRDFSNFINKYDPNSNTETGKRILGNMIATLLPDEVWQFLGVNKYEIGLFNRGSLFHSILFGSQNSTVGVRITYFG EMYIVNGIYGIFLGTLIISTLLGLLSKYNYSLFTWLMTINLAISQFNGLNVITLRIIPILIVVLIAEFNWAVAIKELYYK SGHTLGGQNERLSAIGRESAGV
Sequences:
>Translated_422_residues MNRLFSGVRDNFSFFIYSMIYIYLFGVGYLMSTFMNFFYGYQTIGRNETVYIMIINYLLAVIAYKIARSVLPKRTYPIVL NITRFSYTTSSLALLTVGVMLVFNRLYQMGFKPFWVYGGVPITESGLVGVGLTVLSIASGLDCLYLFSRKSSNSKIFILL LFIAKFSILVLFGRSRSLFLWLGIMFVYFLVIMGIGNHRFRTILFMFIIIAFLSMMFYRILLIKSKIDDPVLISRITLAS LAPEFRDFSNFINKYDPNSNTETGKRILGNMIATLLPDEVWQFLGVNKYEIGLFNRGSLFHSILFGSQNSTVGVRITYFG EMYIVNGIYGIFLGTLIISTLLGLLSKYNYSLFTWLMTINLAISQFNGLNVITLRIIPILIVVLIAEFNWAVAIKELYYK SGHTLGGQNERLSAIGRESAGV >Mature_422_residues MNRLFSGVRDNFSFFIYSMIYIYLFGVGYLMSTFMNFFYGYQTIGRNETVYIMIINYLLAVIAYKIARSVLPKRTYPIVL NITRFSYTTSSLALLTVGVMLVFNRLYQMGFKPFWVYGGVPITESGLVGVGLTVLSIASGLDCLYLFSRKSSNSKIFILL LFIAKFSILVLFGRSRSLFLWLGIMFVYFLVIMGIGNHRFRTILFMFIIIAFLSMMFYRILLIKSKIDDPVLISRITLAS LAPEFRDFSNFINKYDPNSNTETGKRILGNMIATLLPDEVWQFLGVNKYEIGLFNRGSLFHSILFGSQNSTVGVRITYFG EMYIVNGIYGIFLGTLIISTLLGLLSKYNYSLFTWLMTINLAISQFNGLNVITLRIIPILIVVLIAEFNWAVAIKELYYK SGHTLGGQNERLSAIGRESAGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48030; Mature: 48030
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRLFSGVRDNFSFFIYSMIYIYLFGVGYLMSTFMNFFYGYQTIGRNETVYIMIINYLLA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHH VIAYKIARSVLPKRTYPIVLNITRFSYTTSSLALLTVGVMLVFNRLYQMGFKPFWVYGGV HHHHHHHHHHCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC PITESGLVGVGLTVLSIASGLDCLYLFSRKSSNSKIFILLLFIAKFSILVLFGRSRSLFL CCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCEEEHHHHHHHHHHHHHHCCCCCHHHH WLGIMFVYFLVIMGIGNHRFRTILFMFIIIAFLSMMFYRILLIKSKIDDPVLISRITLAS HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LAPEFRDFSNFINKYDPNSNTETGKRILGNMIATLLPDEVWQFLGVNKYEIGLFNRGSLF HCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHCCCEEEEEEECCCHHH HSILFGSQNSTVGVRITYFGEMYIVNGIYGIFLGTLIISTLLGLLSKYNYSLFTWLMTIN HHHHCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH LAISQFNGLNVITLRIIPILIVVLIAEFNWAVAIKELYYKSGHTLGGQNERLSAIGRESA HHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCC GV CC >Mature Secondary Structure MNRLFSGVRDNFSFFIYSMIYIYLFGVGYLMSTFMNFFYGYQTIGRNETVYIMIINYLLA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHH VIAYKIARSVLPKRTYPIVLNITRFSYTTSSLALLTVGVMLVFNRLYQMGFKPFWVYGGV HHHHHHHHHHCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC PITESGLVGVGLTVLSIASGLDCLYLFSRKSSNSKIFILLLFIAKFSILVLFGRSRSLFL CCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCEEEHHHHHHHHHHHHHHCCCCCHHHH WLGIMFVYFLVIMGIGNHRFRTILFMFIIIAFLSMMFYRILLIKSKIDDPVLISRITLAS HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LAPEFRDFSNFINKYDPNSNTETGKRILGNMIATLLPDEVWQFLGVNKYEIGLFNRGSLF HCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHCCCEEEEEEECCCHHH HSILFGSQNSTVGVRITYFGEMYIVNGIYGIFLGTLIISTLLGLLSKYNYSLFTWLMTIN HHHHCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH LAISQFNGLNVITLRIIPILIVVLIAEFNWAVAIKELYYKSGHTLGGQNERLSAIGRESA HHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCC GV CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA