| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239617653
Identifier: 239617653
GI number: 239617653
Start: 1356070
End: 1357065
Strand: Reverse
Name: 239617653
Synonym: Kole_1276
Alternate gene names: NA
Gene position: 1357065-1356070 (Counterclockwise)
Preceding gene: 239617654
Following gene: 239617652
Centisome position: 58.95
GC content: 36.45
Gene sequence:
>996_bases ATGAAATGTCCAAAGTGTGGTAGAGAGTTATATAAAAAACAAATAAGGGAAAAACAGAGTTTTAAAGGGAGGGAAGTTGA ACTTTCCTATAATGTTTTTGTATGCCCTCAATGTGAAGATTCTTTTGTAGATTCTGCTTCTCTGGAACAGGCCTGGAAAA AGGTCTGGGATGACTATGAAAAGGAAAATCATATACCTTCACCTGAGACATTGCGCGAAGCCAGAATGAAACTCAAATTA ACCGCCGAAGAGCTTTCAAAGATAATAGGAAGAACCAAGTCTCTAATTTCCAAGCTTGAAAATGGTTCGCGTAGATTATC CGAATCATTGCTCAAGATATATGAGAATCACATAATTCCTGGTGGTGATGATTTCGCGCAACTTCTTGATAAGGCTGTAC TTGATGGAAGAATCGCAATGGAGGAGAGGAACCAGTTTTTGGAGAGAATGGGGATATCAAATAGAACTTTACTTGATCAA GAAATCTTGTCAGAACACGGAGATCTTCCTTCCGTACTGAACGGTTATACAGTATTCGACGGCGAAAAACTTTGCGCATG TGTAGCAAAAATAATGGCTGTTCAAAAGTCTTTAGACATGATGAAGCTGCTCAAGCTCATGTTCTATGTTGACGCGGAAT CTTTTGTGAAAACCGGTAAATCTATTTTTGGATTGCGATATAAGGCTAACATATATGGTCCAACACCTTATAACTACGAC ATTATCCTTGGATATCTCAAGAAAAAGGGCGTTATTTCAGACAACCAAGATAAAGAACATTTTTTGGACTACCGTGAATA CAAACCAGCTAAAGTTATTTCAAAAGGAGAATCTTTAATAATCGATTCTGTCTTAAAGACTTATGGAAAATTAAGTTCAA GGAAATTATCAGAATTGACTCATGATGAAAAGTGCTGGAAAGAAACTGAACGAGGGAAAATAATTAGATTCAATAAAAAC ATGATCCAAAGCAGAATTCCGATCAAAGTTTTATAA
Upstream 100 bases:
>100_bases CAAATAATCATGTATACTTCAAACTTAGTTTCAGTATTCCCGAAAGAGTTATCTGTCTTTCGCTGCATTTACCGGAATAT GGTCCCGGGGAGGCGGGATG
Downstream 100 bases:
>100_bases AAGAGCTGCTTTGCAGTTGGAGCGGAGAAAAATAGGAACGGAGAAAAATAGGAGAAAAATAGGGACAGACTCCAATATTT TATGGTATGATCGGGTATCT
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator XRE Family; Xin-Antitoxin System Antitoxin Component Xre Family; XRE Family Transcriptional Regulator; Helix-Turn-Helix Domain Protein
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MKCPKCGRELYKKQIREKQSFKGREVELSYNVFVCPQCEDSFVDSASLEQAWKKVWDDYEKENHIPSPETLREARMKLKL TAEELSKIIGRTKSLISKLENGSRRLSESLLKIYENHIIPGGDDFAQLLDKAVLDGRIAMEERNQFLERMGISNRTLLDQ EILSEHGDLPSVLNGYTVFDGEKLCACVAKIMAVQKSLDMMKLLKLMFYVDAESFVKTGKSIFGLRYKANIYGPTPYNYD IILGYLKKKGVISDNQDKEHFLDYREYKPAKVISKGESLIIDSVLKTYGKLSSRKLSELTHDEKCWKETERGKIIRFNKN MIQSRIPIKVL
Sequences:
>Translated_331_residues MKCPKCGRELYKKQIREKQSFKGREVELSYNVFVCPQCEDSFVDSASLEQAWKKVWDDYEKENHIPSPETLREARMKLKL TAEELSKIIGRTKSLISKLENGSRRLSESLLKIYENHIIPGGDDFAQLLDKAVLDGRIAMEERNQFLERMGISNRTLLDQ EILSEHGDLPSVLNGYTVFDGEKLCACVAKIMAVQKSLDMMKLLKLMFYVDAESFVKTGKSIFGLRYKANIYGPTPYNYD IILGYLKKKGVISDNQDKEHFLDYREYKPAKVISKGESLIIDSVLKTYGKLSSRKLSELTHDEKCWKETERGKIIRFNKN MIQSRIPIKVL >Mature_331_residues MKCPKCGRELYKKQIREKQSFKGREVELSYNVFVCPQCEDSFVDSASLEQAWKKVWDDYEKENHIPSPETLREARMKLKL TAEELSKIIGRTKSLISKLENGSRRLSESLLKIYENHIIPGGDDFAQLLDKAVLDGRIAMEERNQFLERMGISNRTLLDQ EILSEHGDLPSVLNGYTVFDGEKLCACVAKIMAVQKSLDMMKLLKLMFYVDAESFVKTGKSIFGLRYKANIYGPTPYNYD IILGYLKKKGVISDNQDKEHFLDYREYKPAKVISKGESLIIDSVLKTYGKLSSRKLSELTHDEKCWKETERGKIIRFNKN MIQSRIPIKVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38204; Mature: 38204
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKCPKCGRELYKKQIREKQSFKGREVELSYNVFVCPQCEDSFVDSASLEQAWKKVWDDYE CCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCHHHCCHHHHHHHHHHHHHHHH KENHIPSPETLREARMKLKLTAEELSKIIGRTKSLISKLENGSRRLSESLLKIYENHIIP HCCCCCCHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GGDDFAQLLDKAVLDGRIAMEERNQFLERMGISNRTLLDQEILSEHGDLPSVLNGYTVFD CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHCCCEEEC GEKLCACVAKIMAVQKSLDMMKLLKLMFYVDAESFVKTGKSIFGLRYKANIYGPTPYNYD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCHHHHEEEEEEEECCCCCCCHH IILGYLKKKGVISDNQDKEHFLDYREYKPAKVISKGESLIIDSVLKTYGKLSSRKLSELT HHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH HDEKCWKETERGKIIRFNKNMIQSRIPIKVL HHHHHHHHHHCCCEEEECHHHHHHCCCCEEC >Mature Secondary Structure MKCPKCGRELYKKQIREKQSFKGREVELSYNVFVCPQCEDSFVDSASLEQAWKKVWDDYE CCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCHHHCCHHHHHHHHHHHHHHHH KENHIPSPETLREARMKLKLTAEELSKIIGRTKSLISKLENGSRRLSESLLKIYENHIIP HCCCCCCHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GGDDFAQLLDKAVLDGRIAMEERNQFLERMGISNRTLLDQEILSEHGDLPSVLNGYTVFD CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHCCCEEEC GEKLCACVAKIMAVQKSLDMMKLLKLMFYVDAESFVKTGKSIFGLRYKANIYGPTPYNYD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCHHHHEEEEEEEECCCCCCCHH IILGYLKKKGVISDNQDKEHFLDYREYKPAKVISKGESLIIDSVLKTYGKLSSRKLSELT HHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH HDEKCWKETERGKIIRFNKNMIQSRIPIKVL HHHHHHHHHHCCCEEEECHHHHHHCCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA