| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239617652
Identifier: 239617652
GI number: 239617652
Start: 1355255
End: 1355947
Strand: Reverse
Name: 239617652
Synonym: Kole_1275
Alternate gene names: NA
Gene position: 1355947-1355255 (Counterclockwise)
Preceding gene: 239617653
Following gene: 239617650
Centisome position: 58.9
GC content: 41.41
Gene sequence:
>693_bases ATGCCAAGAAGCGCGAGGGTTGTTCTCGAGGGTATTGCTCATCATGTAACCCAAAGGGGAAATTATCGTCAGAACATCTT TGAGGATCCTGAAGACAGAATCAAGTACCTTGAGCTCATTAAGGAATATTCAACCAAATACGGGCTCAAGATATATGCGT ATTGCCTCATGACCAATCATGTTCATTTTATCGCTGTCCCTGAAAGAGAAGATTCTCTAGCCATGGCTTTTAAGTACGCT CATATGAGATACTCACAGTATTTCAACCGAAAACACCATAGAACAGGGCATCTTTGGCAGGGAAGATTCTTTTCCTGCCC TCTCGATCATGAACATGCTATTTCGGCCGTCAAATATGTTGAGAGAAATCCCGTGAGAGCAAAGATGGTTGAACTTCCCT GGGATTATGAATGGTCGAGCGCTGGAGTACGTGTAAAAGAAAATGGGGACACACGGAGGGAAAGTCCTCATTTTCTTCAC TTAAGCGATTTGTCAGATTTTGGATTTAACTGGAATCCTGACGGATGGAAAGAATATCTTGGATATCCGGATAGTAATGA TTTTCTTTCTAATATACGAAGGAATACTTCTACTGGAAGACTATTTTTTAACGACGAAAAAATTGCTAAATTTGAAGAGG TTTTGGGCCTCCCACTGAAAAGAAGGCCAAGAGGCAGACCAAAGAAAAGGTAA
Upstream 100 bases:
>100_bases CGGAGAAAAATAGGAACGGAGAAAAATAGGAGAAAAATAGGGACAGACTCCAATATTTTATGGTATGATCGGGTATCTTG GTTGCCAGGTGGTGGATGAA
Downstream 100 bases:
>100_bases TGTTTACAAGGCTTGGCGCTGCACGGCGGACGCGAACTGCTCGTGGTTGTCTCGAACTCGTGATAAGAATACGAGAATCT GGTAAGCACGCTGACGCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MPRSARVVLEGIAHHVTQRGNYRQNIFEDPEDRIKYLELIKEYSTKYGLKIYAYCLMTNHVHFIAVPEREDSLAMAFKYA HMRYSQYFNRKHHRTGHLWQGRFFSCPLDHEHAISAVKYVERNPVRAKMVELPWDYEWSSAGVRVKENGDTRRESPHFLH LSDLSDFGFNWNPDGWKEYLGYPDSNDFLSNIRRNTSTGRLFFNDEKIAKFEEVLGLPLKRRPRGRPKKR
Sequences:
>Translated_230_residues MPRSARVVLEGIAHHVTQRGNYRQNIFEDPEDRIKYLELIKEYSTKYGLKIYAYCLMTNHVHFIAVPEREDSLAMAFKYA HMRYSQYFNRKHHRTGHLWQGRFFSCPLDHEHAISAVKYVERNPVRAKMVELPWDYEWSSAGVRVKENGDTRRESPHFLH LSDLSDFGFNWNPDGWKEYLGYPDSNDFLSNIRRNTSTGRLFFNDEKIAKFEEVLGLPLKRRPRGRPKKR >Mature_229_residues PRSARVVLEGIAHHVTQRGNYRQNIFEDPEDRIKYLELIKEYSTKYGLKIYAYCLMTNHVHFIAVPEREDSLAMAFKYAH MRYSQYFNRKHHRTGHLWQGRFFSCPLDHEHAISAVKYVERNPVRAKMVELPWDYEWSSAGVRVKENGDTRRESPHFLHL SDLSDFGFNWNPDGWKEYLGYPDSNDFLSNIRRNTSTGRLFFNDEKIAKFEEVLGLPLKRRPRGRPKKR
Specific function: Unknown
COG id: COG1943
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27396; Mature: 27265
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRSARVVLEGIAHHVTQRGNYRQNIFEDPEDRIKYLELIKEYSTKYGLKIYAYCLMTNH CCCHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHHHHHCCHHHEEEEEECCC VHFIAVPEREDSLAMAFKYAHMRYSQYFNRKHHRTGHLWQGRFFSCPLDHEHAISAVKYV EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCEEECCCCHHHHHHHHHHH ERNPVRAKMVELPWDYEWSSAGVRVKENGDTRRESPHFLHLSDLSDFGFNWNPDGWKEYL HCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHC GYPDSNDFLSNIRRNTSTGRLFFNDEKIAKFEEVLGLPLKRRPRGRPKKR CCCCCHHHHHHHHCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure PRSARVVLEGIAHHVTQRGNYRQNIFEDPEDRIKYLELIKEYSTKYGLKIYAYCLMTNH CCHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHHHHHCCHHHEEEEEECCC VHFIAVPEREDSLAMAFKYAHMRYSQYFNRKHHRTGHLWQGRFFSCPLDHEHAISAVKYV EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCEEECCCCHHHHHHHHHHH ERNPVRAKMVELPWDYEWSSAGVRVKENGDTRRESPHFLHLSDLSDFGFNWNPDGWKEYL HCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHC GYPDSNDFLSNIRRNTSTGRLFFNDEKIAKFEEVLGLPLKRRPRGRPKKR CCCCCHHHHHHHHCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA