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The map label for this gene is yufP [H]

Identifier: 239617631

GI number: 239617631

Start: 1328549

End: 1329709

Strand: Direct

Name: yufP [H]

Synonym: Kole_1252

Alternate gene names: 239617631

Gene position: 1328549-1329709 (Clockwise)

Preceding gene: 239617630

Following gene: 239617632

Centisome position: 57.71

GC content: 37.55

Gene sequence:

>1161_bases
ATGAAAAACATAAAAAGATATGAAGTATATAGGACTATTCTAGCGATCGCTATTGCTTTGTTATTGGGATACTTATTAAT
ATTCTTTACAAGCATGCCTAAGGGAGATATGCCTTTAGGTGAAAAATTAAAAGAGGCTTTCCAAGCAGCAAACAAGGCGT
TCAAAGTATTCCTTACTTCTCCTCTTGTGAAAGAAAGGCGCGGGAAAGTCCTTTTTAACTTAAGGGGATTTATACAATGG
ATGAATGAAAGTGTTCCAATAATAATTACAGGTTTGGCTGTTTCACTTGTTTTCACGGCGAAACAATTTAATATCGGTGC
AGAAGGACAATTGTTCATCGGTGCCGCAGTTGCAAGTTTTGCCGCGATATATTTTCCAGCAATACCTATAATACATCCTA
TTGTTGTAATATTACTGGCTTCATTAACCGGTGCTGCGTGGGCTTCTGTTCCAGCAATAATGAAATCAAAATTAAACGCA
TCGGAACTTGTTACCTCCTTGATGATGAACTATGTTGCATTATACATGGGATTGTTTATCATAAAAGTTTTTCTTAGAGA
CCCAAATGCTGGACAGCTTGTTTCACTACCTTACAAAGAAACATCCATGTTATTCCTGATCAACTCAAGATATAGATGGC
ATATTGGAATAATAATCGCTCTGGTTATGAGCTTCTTGTTATGGTTCATAGTAAAAAGAACAACCTGGGGATACAAGGTT
AGATTGATTGGTAACAACAAAAATTTCGCATACTATTCTGGAATAAACACTTCAAGAACGATTTTCCAGGTTCAGGTAGT
TAGTGGTGCAATTGCCGGGATGGCCGGCATTATAGAATTGATAGGATATCACGGTAGATTTTTATGGCTCTTTTCACCAG
GTTATGGATGGGATGGAATCATTATTGCAACATTAGCAAGAAATAATCCGCTTTTTGTACCGATTGCTGCTCTCTTCCTT
TCTTATATAAGGGTTGGAGCTAAAACTATGGGAAGATACACGAATATCCCACCGGAAATAGTTTCCATATTACAGGCTAC
GATAATATTGCTTGTAACCGCAGAAGCGTTCTTATCGAGGTTACGTCAAAAAGCTATTGAAAAAGAAGCAAAGGCAAATG
AACCAAATAACGTGGCAGTTGCAGGTGGTGATGTCGAATGA

Upstream 100 bases:

>100_bases
TTGCACATTTCAAGGATATCTCCAAAATTAACGAAACAATACTGGGCGAATATATGCTTGGGATAAAAAAGATGAATATT
GATGAAATGGGTGATTCGCT

Downstream 100 bases:

>100_bases
ATAGCGCACTGAGTGCCATTTTTTCGTGGGAATTTGTTGCAGCGGGAACGAGAGTCACAACGCCTATATTATTAGCTGCG
CTAGGAGCACTTGTTGCAGA

Product: inner-membrane translocator

Products: ADP; phosphate; ribose [Cytoplasm]; D-allose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MKNIKRYEVYRTILAIAIALLLGYLLIFFTSMPKGDMPLGEKLKEAFQAANKAFKVFLTSPLVKERRGKVLFNLRGFIQW
MNESVPIIITGLAVSLVFTAKQFNIGAEGQLFIGAAVASFAAIYFPAIPIIHPIVVILLASLTGAAWASVPAIMKSKLNA
SELVTSLMMNYVALYMGLFIIKVFLRDPNAGQLVSLPYKETSMLFLINSRYRWHIGIIIALVMSFLLWFIVKRTTWGYKV
RLIGNNKNFAYYSGINTSRTIFQVQVVSGAIAGMAGIIELIGYHGRFLWLFSPGYGWDGIIIATLARNNPLFVPIAALFL
SYIRVGAKTMGRYTNIPPEIVSILQATIILLVTAEAFLSRLRQKAIEKEAKANEPNNVAVAGGDVE

Sequences:

>Translated_386_residues
MKNIKRYEVYRTILAIAIALLLGYLLIFFTSMPKGDMPLGEKLKEAFQAANKAFKVFLTSPLVKERRGKVLFNLRGFIQW
MNESVPIIITGLAVSLVFTAKQFNIGAEGQLFIGAAVASFAAIYFPAIPIIHPIVVILLASLTGAAWASVPAIMKSKLNA
SELVTSLMMNYVALYMGLFIIKVFLRDPNAGQLVSLPYKETSMLFLINSRYRWHIGIIIALVMSFLLWFIVKRTTWGYKV
RLIGNNKNFAYYSGINTSRTIFQVQVVSGAIAGMAGIIELIGYHGRFLWLFSPGYGWDGIIIATLARNNPLFVPIAALFL
SYIRVGAKTMGRYTNIPPEIVSILQATIILLVTAEAFLSRLRQKAIEKEAKANEPNNVAVAGGDVE
>Mature_386_residues
MKNIKRYEVYRTILAIAIALLLGYLLIFFTSMPKGDMPLGEKLKEAFQAANKAFKVFLTSPLVKERRGKVLFNLRGFIQW
MNESVPIIITGLAVSLVFTAKQFNIGAEGQLFIGAAVASFAAIYFPAIPIIHPIVVILLASLTGAAWASVPAIMKSKLNA
SELVTSLMMNYVALYMGLFIIKVFLRDPNAGQLVSLPYKETSMLFLINSRYRWHIGIIIALVMSFLLWFIVKRTTWGYKV
RLIGNNKNFAYYSGINTSRTIFQVQVVSGAIAGMAGIIELIGYHGRFLWLFSPGYGWDGIIIATLARNNPLFVPIAALFL
SYIRVGAKTMGRYTNIPPEIVSILQATIILLVTAEAFLSRLRQKAIEKEAKANEPNNVAVAGGDVE

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4603

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851
- InterPro:   IPR002229 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 42771; Mature: 42771

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIKRYEVYRTILAIAIALLLGYLLIFFTSMPKGDMPLGEKLKEAFQAANKAFKVFLTS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
PLVKERRGKVLFNLRGFIQWMNESVPIIITGLAVSLVFTAKQFNIGAEGQLFIGAAVASF
HHHHHHCCCEEEHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCCCCCEEHHHHHHHH
AAIYFPAIPIIHPIVVILLASLTGAAWASVPAIMKSKLNASELVTSLMMNYVALYMGLFI
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
IKVFLRDPNAGQLVSLPYKETSMLFLINSRYRWHIGIIIALVMSFLLWFIVKRTTWGYKV
HHHHHCCCCCCCEEECCCCCCEEEEEEECCCEEHHHHHHHHHHHHHHHHHHHHCCCCEEE
RLIGNNKNFAYYSGINTSRTIFQVQVVSGAIAGMAGIIELIGYHGRFLWLFSPGYGWDGI
EEEECCCCEEEEECCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCE
IIATLARNNPLFVPIAALFLSYIRVGAKTMGRYTNIPPEIVSILQATIILLVTAEAFLSR
EEEEEECCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LRQKAIEKEAKANEPNNVAVAGGDVE
HHHHHHHHHHHCCCCCCEEEECCCCC
>Mature Secondary Structure
MKNIKRYEVYRTILAIAIALLLGYLLIFFTSMPKGDMPLGEKLKEAFQAANKAFKVFLTS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
PLVKERRGKVLFNLRGFIQWMNESVPIIITGLAVSLVFTAKQFNIGAEGQLFIGAAVASF
HHHHHHCCCEEEHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCCCCCEEHHHHHHHH
AAIYFPAIPIIHPIVVILLASLTGAAWASVPAIMKSKLNASELVTSLMMNYVALYMGLFI
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
IKVFLRDPNAGQLVSLPYKETSMLFLINSRYRWHIGIIIALVMSFLLWFIVKRTTWGYKV
HHHHHCCCCCCCEEECCCCCCEEEEEEECCCEEHHHHHHHHHHHHHHHHHHHHCCCCEEE
RLIGNNKNFAYYSGINTSRTIFQVQVVSGAIAGMAGIIELIGYHGRFLWLFSPGYGWDGI
EEEECCCCEEEEECCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCE
IIATLARNNPLFVPIAALFLSYIRVGAKTMGRYTNIPPEIVSILQATIILLVTAEAFLSR
EEEEEECCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LRQKAIEKEAKANEPNNVAVAGGDVE
HHHHHHHHHHHCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: H2O; ribose [Periplasm]; D-allose [Periplasm]; ATP [C]

Specific reaction: ATP + H2O + ribose [Periplasm] = ADP + phosphate + ribose [Cytoplasm] D-allose [Periplasm] + ATP + H2O = D-allose [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]