| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
Click here to switch to the map view.
The map label for this gene is 239617601
Identifier: 239617601
GI number: 239617601
Start: 1297738
End: 1298946
Strand: Reverse
Name: 239617601
Synonym: Kole_1222
Alternate gene names: NA
Gene position: 1298946-1297738 (Counterclockwise)
Preceding gene: 239617604
Following gene: 239617600
Centisome position: 56.42
GC content: 43.92
Gene sequence:
>1209_bases ATGAAAAAGCTTCTTCTTGTTCTTGTGCTCGTTGCTATTGCAGCTTTTGCTTTTGGTAAGGAAACGCTAGTTGTTGTTTC AAGACTCTGGACACCACCATCAGAAAAGGAATTTGTCATCAATGAGATCATCAAGCCTTTTGAAGAGATGTACGGTGTTG AGGTTAAGTTCTCCACTCTTGATGATCAAAAGATTCTTGAACAGGTTAAACTGCAGCAGCAAACAGGCAATATAACGACG GACGTCGTTATTGCCTATGCTGCGAAAATGCCAGAATGGGTTAAAAATGGGTATGTTGTCGATCTTACAGATATTGTTTC CCAGTGGACCGATAGGCATTTCTCTAAAGGTCTTGATTCCATGACCATCTTCGACGGTAAAAGATACTTTCTTCCCATTG GCGCCGATGTTTATCTGTTCATCGCTAACAAAAAGGCTCTTCCTTACTTACCAGAAGGTGCTGATATTCAGGATTTAACC TGGGAACAAGTTGCTGAATGGGCTAATGCTATTGCCATCGGTGAGGGTGAAGGAAAATTTGCCGTTACCGGTGTCCCAAT GAAATCCTTCATTTACCAGGCTGGTGCAGTATGTCTTTCCTATGGTGCGGACTGGCCAAACCTCGATAACCCCGGCGCGA TGGCGGCCTTTTATCTGTTGAGTAAAATGGCAGATGCATTTCCACCTGCTGTCATGACTTACGACGATGTTAGACCTCCT TTAAAGAGAGGAGAAGCCTGGCTAGCAGCTGCACATAACGCAAGAATCGGTGAAGTCTATAAAAATGACCCCACAAACTT CATTATTGCTCCTGTTCCTAAAGGTCCCGCCGGAAGAGGATCCGTTGCCGGTACCAGCGGTCTAGCCATTGTAAAGGGAA CAAAGCATTATGACCTTGCTGTCAAATTCCTGGAATACATAACCAGGCCAGACATCATGTTGAAGGTCAGCAAGGGAACC GGCGGCTTTATACCCACAGTTGAAGAAGCTATTAATTACCTTGGTGACACTGTTGAGGATGAAGTTATTAAGAAGTCAAT CATGGTCATGAAAACTGGAGTTCTTTCCTACATCGCTCCTCTCTGGAAAGACTGGGGCCAGGTTAAGCTCGTTTACGACG ACATTTTCAAGAATATGATTATGAAAGGTATCTTTAATCCTCAATACCTTGAGATCATGCAGCTCAGAATTGACGCTCTC AGGAAATAA
Upstream 100 bases:
>100_bases AATCGTGTTTGTTCGAATTACTTCATAGGAGTAAGCTTATTTTGTGCCACAAATGACAACGTTGTCTTTAATCACCTTTT GAAAAGGGGGGAATCTAAGT
Downstream 100 bases:
>100_bases CCCTTAGAGTCGTCACTGTTATACAACGGGGGACTTTTAGTCCCCCTTATTTTGGAATTGTACAAGCTAGGTGGTGATGA TTATCACAGCGGTGAAGTTT
Product: extracellular solute-binding protein family 1
Products: NA
Alternate protein names: ABC-Type Transport System Periplasmic Component; Motifprokaryotic Membrane Lipoprotein Lipid Attachment Site
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MKKLLLVLVLVAIAAFAFGKETLVVVSRLWTPPSEKEFVINEIIKPFEEMYGVEVKFSTLDDQKILEQVKLQQQTGNITT DVVIAYAAKMPEWVKNGYVVDLTDIVSQWTDRHFSKGLDSMTIFDGKRYFLPIGADVYLFIANKKALPYLPEGADIQDLT WEQVAEWANAIAIGEGEGKFAVTGVPMKSFIYQAGAVCLSYGADWPNLDNPGAMAAFYLLSKMADAFPPAVMTYDDVRPP LKRGEAWLAAAHNARIGEVYKNDPTNFIIAPVPKGPAGRGSVAGTSGLAIVKGTKHYDLAVKFLEYITRPDIMLKVSKGT GGFIPTVEEAINYLGDTVEDEVIKKSIMVMKTGVLSYIAPLWKDWGQVKLVYDDIFKNMIMKGIFNPQYLEIMQLRIDAL RK
Sequences:
>Translated_402_residues MKKLLLVLVLVAIAAFAFGKETLVVVSRLWTPPSEKEFVINEIIKPFEEMYGVEVKFSTLDDQKILEQVKLQQQTGNITT DVVIAYAAKMPEWVKNGYVVDLTDIVSQWTDRHFSKGLDSMTIFDGKRYFLPIGADVYLFIANKKALPYLPEGADIQDLT WEQVAEWANAIAIGEGEGKFAVTGVPMKSFIYQAGAVCLSYGADWPNLDNPGAMAAFYLLSKMADAFPPAVMTYDDVRPP LKRGEAWLAAAHNARIGEVYKNDPTNFIIAPVPKGPAGRGSVAGTSGLAIVKGTKHYDLAVKFLEYITRPDIMLKVSKGT GGFIPTVEEAINYLGDTVEDEVIKKSIMVMKTGVLSYIAPLWKDWGQVKLVYDDIFKNMIMKGIFNPQYLEIMQLRIDAL RK >Mature_402_residues MKKLLLVLVLVAIAAFAFGKETLVVVSRLWTPPSEKEFVINEIIKPFEEMYGVEVKFSTLDDQKILEQVKLQQQTGNITT DVVIAYAAKMPEWVKNGYVVDLTDIVSQWTDRHFSKGLDSMTIFDGKRYFLPIGADVYLFIANKKALPYLPEGADIQDLT WEQVAEWANAIAIGEGEGKFAVTGVPMKSFIYQAGAVCLSYGADWPNLDNPGAMAAFYLLSKMADAFPPAVMTYDDVRPP LKRGEAWLAAAHNARIGEVYKNDPTNFIIAPVPKGPAGRGSVAGTSGLAIVKGTKHYDLAVKFLEYITRPDIMLKVSKGT GGFIPTVEEAINYLGDTVEDEVIKKSIMVMKTGVLSYIAPLWKDWGQVKLVYDDIFKNMIMKGIFNPQYLEIMQLRIDAL RK
Specific function: Unknown
COG id: COG1653
COG function: function code G; ABC-type sugar transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44714; Mature: 44714
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLLVLVLVAIAAFAFGKETLVVVSRLWTPPSEKEFVINEIIKPFEEMYGVEVKFSTL CHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCEEEEECC DDQKILEQVKLQQQTGNITTDVVIAYAAKMPEWVKNGYVVDLTDIVSQWTDRHFSKGLDS CHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHCCEEEEHHHHHHHHHHHHHHCCCCC MTIFDGKRYFLPIGADVYLFIANKKALPYLPEGADIQDLTWEQVAEWANAIAIGEGEGKF EEEECCCEEEEEECCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHEEEEECCCCCE AVTGVPMKSFIYQAGAVCLSYGADWPNLDNPGAMAAFYLLSKMADAFPPAVMTYDDVRPP EEECCCHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEHHCCCCC LKRGEAWLAAAHNARIGEVYKNDPTNFIIAPVPKGPAGRGSVAGTSGLAIVKGTKHYDLA HHHCCEEEEECCCCCCCHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCHHHHH VKFLEYITRPDIMLKVSKGTGGFIPTVEEAINYLGDTVEDEVIKKSIMVMKTGVLSYIAP HHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH LWKDWGQVKLVYDDIFKNMIMKGIFNPQYLEIMQLRIDALRK HHHCCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MKKLLLVLVLVAIAAFAFGKETLVVVSRLWTPPSEKEFVINEIIKPFEEMYGVEVKFSTL CHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCEEEEECC DDQKILEQVKLQQQTGNITTDVVIAYAAKMPEWVKNGYVVDLTDIVSQWTDRHFSKGLDS CHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHCCEEEEHHHHHHHHHHHHHHCCCCC MTIFDGKRYFLPIGADVYLFIANKKALPYLPEGADIQDLTWEQVAEWANAIAIGEGEGKF EEEECCCEEEEEECCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHEEEEECCCCCE AVTGVPMKSFIYQAGAVCLSYGADWPNLDNPGAMAAFYLLSKMADAFPPAVMTYDDVRPP EEECCCHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEHHCCCCC LKRGEAWLAAAHNARIGEVYKNDPTNFIIAPVPKGPAGRGSVAGTSGLAIVKGTKHYDLA HHHCCEEEEECCCCCCCHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCHHHHH VKFLEYITRPDIMLKVSKGTGGFIPTVEEAINYLGDTVEDEVIKKSIMVMKTGVLSYIAP HHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH LWKDWGQVKLVYDDIFKNMIMKGIFNPQYLEIMQLRIDALRK HHHCCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA