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The map label for this gene is ugpA [H]

Identifier: 239617600

GI number: 239617600

Start: 1296783

End: 1297661

Strand: Reverse

Name: ugpA [H]

Synonym: Kole_1221

Alternate gene names: 239617600

Gene position: 1297661-1296783 (Counterclockwise)

Preceding gene: 239617601

Following gene: 239617599

Centisome position: 56.37

GC content: 40.27

Gene sequence:

>879_bases
ATGATTATCACAGCGGTGAAGTTTAAAAGATATATCCCCTATCTTTTGATAGCACCTACAATTATTTATTACGCTATTTT
CTGGTTGAGGCCTGTTCTAACGGCTGTTTTCTACAGCTTTTTTGAAGAGGGAAGCAACCAGCTTACACTCGCTAACTATA
AAACCATATTCACTGATCCGTATTTCTTGAAAGCGCTTATTAATACAGGGATTTTTGTTGCTATTTCTGTCACACTCGAG
TTTATTGTTGCACTGGGACTGGCTTTGCTCATAAATAAAAAATTCAAAGGAGCAGGTATTTTCCTTTCGCTTGCGCTCAT
TCCTATGGCATTACCTGCCACAGCAGTCGGAGCTATGTGGTCCAGTGGTTTTGCTACCTACGGCTGGGTCAATAGTCTCT
TGTATAGACTCGGTTTGATAGCAGCAGATGGTAAAATCCCCTTTCTCGCGGGAAATGAGTTTCAATCTCTAATGCTTATT
ATTTTGATAGACGCATGGCAGGTTATTCCATTTATGATGGTCATTTTACTTGCCGGGTTACAGGGAATTCCAAAGGAATC
AATTGAAGCTGGTTATGTTTTTGGGGGCAATAAGCCTACGGTTTTGAAAAAAATAACAATGCCTATGCTCAAGCCAAGTA
TTCAAACGGCTTTGATACTGAGAATTATCTCTGCTATTCAAGTCTGGTTGATCATCGTTATGATTTATGGTTACAGGCGG
ATCCCCGTCCTGCTTGAAGAAGTTGTCTTTTACAAAGAAGAAATCATGGGATTTTATAGAATCGCCCTTGCATATTCAGT
CATAGTTGCCGCATTAGTTTCAGTTGTTGCCATACTCTATTTGAAGGTCTCGGGAGCCTTCAAAAAGGAGGAAGCCTGA

Upstream 100 bases:

>100_bases
AGAATTGACGCTCTCAGGAAATAACCCTTAGAGTCGTCACTGTTATACAACGGGGGACTTTTAGTCCCCCTTATTTTGGA
ATTGTACAAGCTAGGTGGTG

Downstream 100 bases:

>100_bases
TGGCAAGAAGGAAAAGTACAAAAAAAATCATATCAAGTACTATTTTCTATATATTCGTTGCCGGAATTGCCACTGTTATT
GTTCTCCCCATATATTTTCT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MIITAVKFKRYIPYLLIAPTIIYYAIFWLRPVLTAVFYSFFEEGSNQLTLANYKTIFTDPYFLKALINTGIFVAISVTLE
FIVALGLALLINKKFKGAGIFLSLALIPMALPATAVGAMWSSGFATYGWVNSLLYRLGLIAADGKIPFLAGNEFQSLMLI
ILIDAWQVIPFMMVILLAGLQGIPKESIEAGYVFGGNKPTVLKKITMPMLKPSIQTALILRIISAIQVWLIIVMIYGYRR
IPVLLEEVVFYKEEIMGFYRIALAYSVIVAALVSVVAILYLKVSGAFKKEEA

Sequences:

>Translated_292_residues
MIITAVKFKRYIPYLLIAPTIIYYAIFWLRPVLTAVFYSFFEEGSNQLTLANYKTIFTDPYFLKALINTGIFVAISVTLE
FIVALGLALLINKKFKGAGIFLSLALIPMALPATAVGAMWSSGFATYGWVNSLLYRLGLIAADGKIPFLAGNEFQSLMLI
ILIDAWQVIPFMMVILLAGLQGIPKESIEAGYVFGGNKPTVLKKITMPMLKPSIQTALILRIISAIQVWLIIVMIYGYRR
IPVLLEEVVFYKEEIMGFYRIALAYSVIVAALVSVVAILYLKVSGAFKKEEA
>Mature_292_residues
MIITAVKFKRYIPYLLIAPTIIYYAIFWLRPVLTAVFYSFFEEGSNQLTLANYKTIFTDPYFLKALINTGIFVAISVTLE
FIVALGLALLINKKFKGAGIFLSLALIPMALPATAVGAMWSSGFATYGWVNSLLYRLGLIAADGKIPFLAGNEFQSLMLI
ILIDAWQVIPFMMVILLAGLQGIPKESIEAGYVFGGNKPTVLKKITMPMLKPSIQTALILRIISAIQVWLIIVMIYGYRR
IPVLLEEVVFYKEEIMGFYRIALAYSVIVAALVSVVAILYLKVSGAFKKEEA

Specific function: Part of the ABC transporter complex ugpABCE involved in sn-glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=210, Percent_Identity=27.6190476190476, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI1787570, Length=231, Percent_Identity=27.7056277056277, Blast_Score=69, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32480; Mature: 32480

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIITAVKFKRYIPYLLIAPTIIYYAIFWLRPVLTAVFYSFFEEGSNQLTLANYKTIFTDP
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHCCH
YFLKALINTGIFVAISVTLEFIVALGLALLINKKFKGAGIFLSLALIPMALPATAVGAMW
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SSGFATYGWVNSLLYRLGLIAADGKIPFLAGNEFQSLMLIILIDAWQVIPFMMVILLAGL
HCCCHHHHHHHHHHHHHHHEECCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QGIPKESIEAGYVFGGNKPTVLKKITMPMLKPSIQTALILRIISAIQVWLIIVMIYGYRR
CCCCHHHCCCCEEECCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
IPVLLEEVVFYKEEIMGFYRIALAYSVIVAALVSVVAILYLKVSGAFKKEEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MIITAVKFKRYIPYLLIAPTIIYYAIFWLRPVLTAVFYSFFEEGSNQLTLANYKTIFTDP
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHCCH
YFLKALINTGIFVAISVTLEFIVALGLALLINKKFKGAGIFLSLALIPMALPATAVGAMW
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SSGFATYGWVNSLLYRLGLIAADGKIPFLAGNEFQSLMLIILIDAWQVIPFMMVILLAGL
HCCCHHHHHHHHHHHHHHHEECCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QGIPKESIEAGYVFGGNKPTVLKKITMPMLKPSIQTALILRIISAIQVWLIIVMIYGYRR
CCCCHHHCCCCEEECCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
IPVLLEEVVFYKEEIMGFYRIALAYSVIVAALVSVVAILYLKVSGAFKKEEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA