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The map label for this gene is ycjP [C]

Identifier: 239617599

GI number: 239617599

Start: 1295476

End: 1296783

Strand: Reverse

Name: ycjP [C]

Synonym: Kole_1220

Alternate gene names: 239617599

Gene position: 1296783-1295476 (Counterclockwise)

Preceding gene: 239617600

Following gene: 239617598

Centisome position: 56.33

GC content: 39.76

Gene sequence:

>1308_bases
ATGGCAAGAAGGAAAAGTACAAAAAAAATCATATCAAGTACTATTTTCTATATATTCGTTGCCGGAATTGCCACTGTTAT
TGTTCTCCCCATATATTTTCTCGTTTCCATTTCATTTATGTCAGACCAGGAAGCATATGATTGGCCTATAGCTTTGGCTC
CAGCTTTTTCAAATACTTTCTTACTTCAGAAATCCGACAATCTCCCGGACGGTTTTCTTATGAGTGTGTACAGTAAATCC
CAGGAAGATTTCATCAATATATCTGAAGCAAATGACCTTGACAAGATGATAAATTTCATTGACAGAAAGACAGGTAGTAA
AATCCCAAAAAAACTTCTCGAAGAGAAAATAAGCGAACTCGAAACGTTGGTAACCCAAAATGAAGAAAGAATAAACGAGC
TTAAAACTCAGATGAAACGTGAGATTCTGGCAATAAACAGGCTTAACAGAGAGATCGTCAAGATACATCAGAATTTAAAA
CTTTTTGACCCGGAGGATGAAACTTTCCAGGAACTACGCGAGAATCTTCAAAATCAGCTTCAGGAAAAGCAACAGGAAAA
AATTCTGGTAGAAGAAAAAATAAAGACTTTGAAGAAGGAACTCCAATCTATAAGTGGGGTTACATTTAAGGTACGTAAAA
ACATTTTTGCCAGCTACATTACTTTTTTCAGGGTAACTTCGGATTCCGTAGGTGCACTTATAAGAAGCATTCAAGTAGCG
TTATTGACCGTTCTTATTTCTCTTACCATAGGTGGTATGGCTGGCTATGCATTTGCAAGATACGTATTTAAGGGAAAAAA
TCTACTGAAATTAAGTGTTCTCTTTGTCAGGATGTTCCCCGGGATAGCTATAGCCATGCCTATGGTCATAATACTTGCTC
AAATGGGTTTCTATGACAAACCCATAGGTTTATCCCTGGTTTATTCGGTAGGCCAGATTGGTATGACCACGTGGATTACT
GCAAGCATCTTTATGGGAATTTCAGTGGAACTCGAAGAAGCAGCACAGGTGTTTGGCACATCTCGTTTGGGAGCTTTCTT
AAGAGTTACGCTGCCTTTAGCACTCCCCGGTTTGGCTGCCAGCGCCATGTATGCTTTTATCGGTAGCTGGTCAGAAACAG
CGCAGGCCATAGTTTTAACCCAGTTCAAACCTACGTTCCCTGTTGTTATTTATCAGACACTCGTGGGAACAAAGGGTATG
ATAAACCTTGTTGCTGCTGGAGGAGTAACCCTCGCTTTCCCCGCCGTACTTTTTACTATGATCATAAGAAGATATATCCT
TCAGATGTGGGGTGGGGTAAGAGTTTAA

Upstream 100 bases:

>100_bases
GAATCGCCCTTGCATATTCAGTCATAGTTGCCGCATTAGTTTCAGTTGTTGCCATACTCTATTTGAAGGTCTCGGGAGCC
TTCAAAAAGGAGGAAGCCTG

Downstream 100 bases:

>100_bases
GAAAATTATGGAAAAGGAGCTGAGTATATGGCTACGCTTGAACTTATAAATCTTTCCAAAAGATACGGTAAGAGCGTTTG
GGGCGCCAGGGATGTAAACC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 435; Mature: 434

Protein sequence:

>435_residues
MARRKSTKKIISSTIFYIFVAGIATVIVLPIYFLVSISFMSDQEAYDWPIALAPAFSNTFLLQKSDNLPDGFLMSVYSKS
QEDFINISEANDLDKMINFIDRKTGSKIPKKLLEEKISELETLVTQNEERINELKTQMKREILAINRLNREIVKIHQNLK
LFDPEDETFQELRENLQNQLQEKQQEKILVEEKIKTLKKELQSISGVTFKVRKNIFASYITFFRVTSDSVGALIRSIQVA
LLTVLISLTIGGMAGYAFARYVFKGKNLLKLSVLFVRMFPGIAIAMPMVIILAQMGFYDKPIGLSLVYSVGQIGMTTWIT
ASIFMGISVELEEAAQVFGTSRLGAFLRVTLPLALPGLAASAMYAFIGSWSETAQAIVLTQFKPTFPVVIYQTLVGTKGM
INLVAAGGVTLAFPAVLFTMIIRRYILQMWGGVRV

Sequences:

>Translated_435_residues
MARRKSTKKIISSTIFYIFVAGIATVIVLPIYFLVSISFMSDQEAYDWPIALAPAFSNTFLLQKSDNLPDGFLMSVYSKS
QEDFINISEANDLDKMINFIDRKTGSKIPKKLLEEKISELETLVTQNEERINELKTQMKREILAINRLNREIVKIHQNLK
LFDPEDETFQELRENLQNQLQEKQQEKILVEEKIKTLKKELQSISGVTFKVRKNIFASYITFFRVTSDSVGALIRSIQVA
LLTVLISLTIGGMAGYAFARYVFKGKNLLKLSVLFVRMFPGIAIAMPMVIILAQMGFYDKPIGLSLVYSVGQIGMTTWIT
ASIFMGISVELEEAAQVFGTSRLGAFLRVTLPLALPGLAASAMYAFIGSWSETAQAIVLTQFKPTFPVVIYQTLVGTKGM
INLVAAGGVTLAFPAVLFTMIIRRYILQMWGGVRV
>Mature_434_residues
ARRKSTKKIISSTIFYIFVAGIATVIVLPIYFLVSISFMSDQEAYDWPIALAPAFSNTFLLQKSDNLPDGFLMSVYSKSQ
EDFINISEANDLDKMINFIDRKTGSKIPKKLLEEKISELETLVTQNEERINELKTQMKREILAINRLNREIVKIHQNLKL
FDPEDETFQELRENLQNQLQEKQQEKILVEEKIKTLKKELQSISGVTFKVRKNIFASYITFFRVTSDSVGALIRSIQVAL
LTVLISLTIGGMAGYAFARYVFKGKNLLKLSVLFVRMFPGIAIAMPMVIILAQMGFYDKPIGLSLVYSVGQIGMTTWITA
SIFMGISVELEEAAQVFGTSRLGAFLRVTLPLALPGLAASAMYAFIGSWSETAQAIVLTQFKPTFPVVIYQTLVGTKGMI
NLVAAGGVTLAFPAVLFTMIIRRYILQMWGGVRV

Specific function: May participate in oleandomycin secretion during antibiotic production [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=181, Percent_Identity=30.939226519337, Blast_Score=71, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 48788; Mature: 48657

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRKSTKKIISSTIFYIFVAGIATVIVLPIYFLVSISFMSDQEAYDWPIALAPAFSNTF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEE
LLQKSDNLPDGFLMSVYSKSQEDFINISEANDLDKMINFIDRKTGSKIPKKLLEEKISEL
EEECCCCCCCHHHHHHHHCCHHHCEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
ETLVTQNEERINELKTQMKREILAINRLNREIVKIHQNLKLFDPEDETFQELRENLQNQL
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
QEKQQEKILVEEKIKTLKKELQSISGVTFKVRKNIFASYITFFRVTSDSVGALIRSIQVA
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LLTVLISLTIGGMAGYAFARYVFKGKNLLKLSVLFVRMFPGIAIAMPMVIILAQMGFYDK
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCC
PIGLSLVYSVGQIGMTTWITASIFMGISVELEEAAQVFGTSRLGAFLRVTLPLALPGLAA
CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
SAMYAFIGSWSETAQAIVLTQFKPTFPVVIYQTLVGTKGMINLVAAGGVTLAFPAVLFTM
HHHHHHHHCHHHHHHEEEEEECCCCCHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHH
IIRRYILQMWGGVRV
HHHHHHHHHCCCCCC
>Mature Secondary Structure 
ARRKSTKKIISSTIFYIFVAGIATVIVLPIYFLVSISFMSDQEAYDWPIALAPAFSNTF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEE
LLQKSDNLPDGFLMSVYSKSQEDFINISEANDLDKMINFIDRKTGSKIPKKLLEEKISEL
EEECCCCCCCHHHHHHHHCCHHHCEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
ETLVTQNEERINELKTQMKREILAINRLNREIVKIHQNLKLFDPEDETFQELRENLQNQL
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
QEKQQEKILVEEKIKTLKKELQSISGVTFKVRKNIFASYITFFRVTSDSVGALIRSIQVA
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LLTVLISLTIGGMAGYAFARYVFKGKNLLKLSVLFVRMFPGIAIAMPMVIILAQMGFYDK
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCC
PIGLSLVYSVGQIGMTTWITASIFMGISVELEEAAQVFGTSRLGAFLRVTLPLALPGLAA
CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
SAMYAFIGSWSETAQAIVLTQFKPTFPVVIYQTLVGTKGMINLVAAGGVTLAFPAVLFTM
HHHHHHHHCHHHHHHEEEEEECCCCCHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHH
IIRRYILQMWGGVRV
HHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8244027 [H]