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The map label for this gene is yhaM [H]

Identifier: 239617587

GI number: 239617587

Start: 1283973

End: 1284944

Strand: Direct

Name: yhaM [H]

Synonym: Kole_1206

Alternate gene names: 239617587

Gene position: 1283973-1284944 (Clockwise)

Preceding gene: 239617585

Following gene: 239617588

Centisome position: 55.77

GC content: 39.09

Gene sequence:

>972_bases
TTGGAAAATGTAGCTTATGACAAAGAAAATTATGTTAATAATAATCCCGCATTTTTTCTTCTCACAAACGTCGTTCAAAA
GAGCAAAAAAGACGGGAATCCATACTACTCTTGCAGCGTTAGAGATTCAAAAACAGTACTTTCAGCAAACATATGGGAAT
GGGAAGAAGGACAGGAACCGATTTCTGGGGTAGTTGCTTTGGCAACTTATTCTTACAAAAGAAAATATGGACTTTCTTTA
AAGATCCGCAAATTGTACACACTGGAAGAACTTAACAACCATATAGACGATGCCTTTTCTATCTTCCTTCCCAGAGTAGA
GAACATAGAAAATCTTAAAGATGAACTCTCTGATCTTATTCAAGGAATAGAAAATGCTTTTCTGAAAGAGCTGTTAGAAA
AAACGATATCTCCTGGAGATGGAGAAATAAAAGGCTTTTTCCTTGCACCTGCAGCAACGAAAAATCACCATGTCAAAATC
GGTGGATTGCTAGAACACAGCGTAAATGTTGCGAAACTATGCAAAATTGTCGCCAGGACATTTGGTGATGATATAGATAT
GGATTTACTTATTGCGGGAGCCCTGCTGCATGATATAGGCAAGGTACAAACTTACGATTATAAAAGTTATTCTTTTGAAT
TTACAGATGAGGGGTTACTTGAGGACCATATCGTTTTGGGGATAAAGAAACTGGCAGTGGTTATTGGCAAAATAGATGGT
TTCCCGAAAGAAATCGAGCAGAATCTATTTCATATTGTGGCAAGCCACCATGGCTTGAAAGAATGGGGTTCTCCGGTCGT
GCCAAGAACATTGGAAGCAATAATAATCCACAACTGCGATCGTCTTGAAGCCCAAATGGAGGCCTTTAGAGAATTGGCGA
GATCTGTCCCCAAAGGAGGTTCCTGGTCCGATTATTCGGGAATACTTGGTACAAAGGTATTCGTCTATGGAAAATATGGT
GAAGATACCTGA

Upstream 100 bases:

>100_bases
ATTCAATTAATTCACTTTGCCATCTAAAATCAGAATATAAAAGGGGGAGATCTTCATTATCAAGACGGGTGAAAAGGAAT
TTCCAGTTCTTAGTGATATT

Downstream 100 bases:

>100_bases
TAAAAGCATTTCTTGGTCTTAATAAATACAATTTAATTAAGACCAAAAGCAGGTGAGGTATATGGAACAAACAAGCATGA
TTTTGCGTATTGCGAAAATC

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MENVAYDKENYVNNNPAFFLLTNVVQKSKKDGNPYYSCSVRDSKTVLSANIWEWEEGQEPISGVVALATYSYKRKYGLSL
KIRKLYTLEELNNHIDDAFSIFLPRVENIENLKDELSDLIQGIENAFLKELLEKTISPGDGEIKGFFLAPAATKNHHVKI
GGLLEHSVNVAKLCKIVARTFGDDIDMDLLIAGALLHDIGKVQTYDYKSYSFEFTDEGLLEDHIVLGIKKLAVVIGKIDG
FPKEIEQNLFHIVASHHGLKEWGSPVVPRTLEAIIIHNCDRLEAQMEAFRELARSVPKGGSWSDYSGILGTKVFVYGKYG
EDT

Sequences:

>Translated_323_residues
MENVAYDKENYVNNNPAFFLLTNVVQKSKKDGNPYYSCSVRDSKTVLSANIWEWEEGQEPISGVVALATYSYKRKYGLSL
KIRKLYTLEELNNHIDDAFSIFLPRVENIENLKDELSDLIQGIENAFLKELLEKTISPGDGEIKGFFLAPAATKNHHVKI
GGLLEHSVNVAKLCKIVARTFGDDIDMDLLIAGALLHDIGKVQTYDYKSYSFEFTDEGLLEDHIVLGIKKLAVVIGKIDG
FPKEIEQNLFHIVASHHGLKEWGSPVVPRTLEAIIIHNCDRLEAQMEAFRELARSVPKGGSWSDYSGILGTKVFVYGKYG
EDT
>Mature_323_residues
MENVAYDKENYVNNNPAFFLLTNVVQKSKKDGNPYYSCSVRDSKTVLSANIWEWEEGQEPISGVVALATYSYKRKYGLSL
KIRKLYTLEELNNHIDDAFSIFLPRVENIENLKDELSDLIQGIENAFLKELLEKTISPGDGEIKGFFLAPAATKNHHVKI
GGLLEHSVNVAKLCKIVARTFGDDIDMDLLIAGALLHDIGKVQTYDYKSYSFEFTDEGLLEDHIVLGIKKLAVVIGKIDG
FPKEIEQNLFHIVASHHGLKEWGSPVVPRTLEAIIIHNCDRLEAQMEAFRELARSVPKGGSWSDYSGILGTKVFVYGKYG
EDT

Specific function: Shows a 3'-5' exoribonuclease activity [H]

COG id: COG3481

COG function: function code R; Predicted HD-superfamily hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yhaM family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020873
- InterPro:   IPR003607
- InterPro:   IPR012340
- InterPro:   IPR004365 [H]

Pfam domain/function: PF01336 tRNA_anti [H]

EC number: NA

Molecular weight: Translated: 36276; Mature: 36276

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENVAYDKENYVNNNPAFFLLTNVVQKSKKDGNPYYSCSVRDSKTVLSANIWEWEEGQEP
CCCCCCCCHHCCCCCCCEEHHHHHHHHHCCCCCCEEEEECCCCCEEEECCCCCCCCCCCH
ISGVVALATYSYKRKYGLSLKIRKLYTLEELNNHIDDAFSIFLPRVENIENLKDELSDLI
HHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
QGIENAFLKELLEKTISPGDGEIKGFFLAPAATKNHHVKIGGLLEHSVNVAKLCKIVART
HHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEEEHHHHCCCHHHHHHHHHHH
FGDDIDMDLLIAGALLHDIGKVQTYDYKSYSFEFTDEGLLEDHIVLGIKKLAVVIGKIDG
CCCCCCHHHHHHHHHHHHHHCCEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCC
FPKEIEQNLFHIVASHHGLKEWGSPVVPRTLEAIIIHNCDRLEAQMEAFRELARSVPKGG
CHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCC
SWSDYSGILGTKVFVYGKYGEDT
CCCCCCCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MENVAYDKENYVNNNPAFFLLTNVVQKSKKDGNPYYSCSVRDSKTVLSANIWEWEEGQEP
CCCCCCCCHHCCCCCCCEEHHHHHHHHHCCCCCCEEEEECCCCCEEEECCCCCCCCCCCH
ISGVVALATYSYKRKYGLSLKIRKLYTLEELNNHIDDAFSIFLPRVENIENLKDELSDLI
HHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
QGIENAFLKELLEKTISPGDGEIKGFFLAPAATKNHHVKIGGLLEHSVNVAKLCKIVART
HHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEEEHHHHCCCHHHHHHHHHHH
FGDDIDMDLLIAGALLHDIGKVQTYDYKSYSFEFTDEGLLEDHIVLGIKKLAVVIGKIDG
CCCCCCHHHHHHHHHHHHHHCCEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCC
FPKEIEQNLFHIVASHHGLKEWGSPVVPRTLEAIIIHNCDRLEAQMEAFRELARSVPKGG
CHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCC
SWSDYSGILGTKVFVYGKYGEDT
CCCCCCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA