Click here to switch to the map view.

The map label for this gene is 239617577

Identifier: 239617577

GI number: 239617577

Start: 1270380

End: 1271303

Strand: Direct

Name: 239617577

Synonym: Kole_1196

Alternate gene names: NA

Gene position: 1270380-1271303 (Clockwise)

Preceding gene: 239617576

Following gene: 239617578

Centisome position: 55.18

GC content: 37.23

Gene sequence:

>924_bases
GTGAAAAGAGCCGTTTTACTTCCAATTTTGATGCTGATTGTAGTATTCTTGATGGAAGCGTGCTTCAAGCCAGAAGCAGA
AAATAAATATTTTCTTTATCAGTTGGTTGAAATGGACATAAAGGAAGTTCTGGAGCATCAATTCGATTATCTGGTAACTG
ATTATTCGAGAGATGGTTCCGAAGATGGGCGATACTCGGAGGAAGAAATTAGTAAATTGAAAGAAAAGGGAATCATTCCT
TTGTGTTATATAAGTATCGGTGAGGCTGAAGACTACAGATTTTACTGGCAGGAAGATTGGCGAACAAATCCGCCTGACTG
GCTTGGACCAGAAAATCCGGAATGGGAGGGAAATTATAAAGTAAGGTATTGGTACGATGAATGGAAGAAGATTGTTTTTG
AGTACCTGGACAAAATTATTGAGGAAGGTTTTTCTGGTATTTATCTGGATATAATTGACGCATACTATTATTGGTCAGTG
GAAATGAACGAGCTTGGTGAAAAAGAAGCTGCTGAGAAGATGATTGAATTTGTGGAAGAAATAGCAAAATATACAAGAGA
AAAAGTTCCGGGCTTTTTAATTGTTCCACAGAATGCAGAGGATATTCTCGAATGTGATGATGACGGAAGTTATCTGGATA
CGATTTCTGGGATAGGTGTCGAAGACCTTTCTTACACAACTGATGATAATGATAACATAATCGTACAGGAAGAGAGTGAT
TACAGAATCGAGTATTTAGACCGAATCAAAACAGCTGGTAAATTCGTCTTGAGCGTGGATTATGTATATGATCCAAAAAA
TCCGGATATGAATATAGTAGGAGATTATGTGAAAAAGGCGAGAAAAAGAGGATATATTCCCTATCCTGCCAATAAAAACA
GAGCTCTGGATGAAATCGTGACGGTAATCTTTGAAATTAAATAG

Upstream 100 bases:

>100_bases
TCGCTCCATCAGCTGACAATGTCGTGAGCGTCAGCCTCGTAAGCGTCCGGAACGAAGTTCCGCGCTTAAGCCGTTTCATG
GTTCAAAAGAAGGTGAAAAA

Downstream 100 bases:

>100_bases
TTGGACCTGTTCGTAAATGTTGAAGAAATCGGATACTGTCCCATCGCAGGCGCACATCAACTGCGAAGCAGCTCTTTCGC
CTTCTCGATTTCTCGGATCT

Product: cysteinyl-tRNA synthetase

Products: AMP; diphosphate; L-cysteinyl-tRNA(Cys)

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MKRAVLLPILMLIVVFLMEACFKPEAENKYFLYQLVEMDIKEVLEHQFDYLVTDYSRDGSEDGRYSEEEISKLKEKGIIP
LCYISIGEAEDYRFYWQEDWRTNPPDWLGPENPEWEGNYKVRYWYDEWKKIVFEYLDKIIEEGFSGIYLDIIDAYYYWSV
EMNELGEKEAAEKMIEFVEEIAKYTREKVPGFLIVPQNAEDILECDDDGSYLDTISGIGVEDLSYTTDDNDNIIVQEESD
YRIEYLDRIKTAGKFVLSVDYVYDPKNPDMNIVGDYVKKARKRGYIPYPANKNRALDEIVTVIFEIK

Sequences:

>Translated_307_residues
MKRAVLLPILMLIVVFLMEACFKPEAENKYFLYQLVEMDIKEVLEHQFDYLVTDYSRDGSEDGRYSEEEISKLKEKGIIP
LCYISIGEAEDYRFYWQEDWRTNPPDWLGPENPEWEGNYKVRYWYDEWKKIVFEYLDKIIEEGFSGIYLDIIDAYYYWSV
EMNELGEKEAAEKMIEFVEEIAKYTREKVPGFLIVPQNAEDILECDDDGSYLDTISGIGVEDLSYTTDDNDNIIVQEESD
YRIEYLDRIKTAGKFVLSVDYVYDPKNPDMNIVGDYVKKARKRGYIPYPANKNRALDEIVTVIFEIK
>Mature_307_residues
MKRAVLLPILMLIVVFLMEACFKPEAENKYFLYQLVEMDIKEVLEHQFDYLVTDYSRDGSEDGRYSEEEISKLKEKGIIP
LCYISIGEAEDYRFYWQEDWRTNPPDWLGPENPEWEGNYKVRYWYDEWKKIVFEYLDKIIEEGFSGIYLDIIDAYYYWSV
EMNELGEKEAAEKMIEFVEEIAKYTREKVPGFLIVPQNAEDILECDDDGSYLDTISGIGVEDLSYTTDDNDNIIVQEESD
YRIEYLDRIKTAGKFVLSVDYVYDPKNPDMNIVGDYVKKARKRGYIPYPANKNRALDEIVTVIFEIK

Specific function: Unknown

COG id: COG2342

COG function: function code G; Predicted extracellular endo alpha-1,4 polygalactosaminidase or related polysaccharide hydrolase

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016063
- InterPro:   IPR017853
- InterPro:   IPR016062
- InterPro:   IPR004352 [H]

Pfam domain/function: PF03537 DUF297 [H]

EC number: 6.1.1.16

Molecular weight: Translated: 36315; Mature: 36315

Theoretical pI: Translated: 4.10; Mature: 4.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRAVLLPILMLIVVFLMEACFKPEAENKYFLYQLVEMDIKEVLEHQFDYLVTDYSRDGS
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCC
EDGRYSEEEISKLKEKGIIPLCYISIGEAEDYRFYWQEDWRTNPPDWLGPENPEWEGNYK
CCCCCCHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEE
VRYWYDEWKKIVFEYLDKIIEEGFSGIYLDIIDAYYYWSVEMNELGEKEAAEKMIEFVEE
EEEEHHHHHHHHHHHHHHHHHCCCCCEEHEEEHHHHEEEEEHHHCCCHHHHHHHHHHHHH
IAKYTREKVPGFLIVPQNAEDILECDDDGSYLDTISGIGVEDLSYTTDDNDNIIVQEESD
HHHHHHHHCCEEEEECCCHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEEECCCC
YRIEYLDRIKTAGKFVLSVDYVYDPKNPDMNIVGDYVKKARKRGYIPYPANKNRALDEIV
CHHHHHHHHHHCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
TVIFEIK
HHHHCCC
>Mature Secondary Structure
MKRAVLLPILMLIVVFLMEACFKPEAENKYFLYQLVEMDIKEVLEHQFDYLVTDYSRDGS
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCC
EDGRYSEEEISKLKEKGIIPLCYISIGEAEDYRFYWQEDWRTNPPDWLGPENPEWEGNYK
CCCCCCHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEE
VRYWYDEWKKIVFEYLDKIIEEGFSGIYLDIIDAYYYWSVEMNELGEKEAAEKMIEFVEE
EEEEHHHHHHHHHHHHHHHHHCCCCCEEHEEEHHHHEEEEEHHHCCCHHHHHHHHHHHHH
IAKYTREKVPGFLIVPQNAEDILECDDDGSYLDTISGIGVEDLSYTTDDNDNIIVQEESD
HHHHHHHHCCEEEEECCCHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEEECCCC
YRIEYLDRIKTAGKFVLSVDYVYDPKNPDMNIVGDYVKKARKRGYIPYPANKNRALDEIV
CHHHHHHHHHHCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
TVIFEIK
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-cysteine; tRNA(Cys)

Specific reaction: ATP + L-cysteine + tRNA(Cys) = AMP + diphosphate + L-cysteinyl-tRNA(Cys)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]