| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is yxaM [H]
Identifier: 239617569
GI number: 239617569
Start: 1259914
End: 1261086
Strand: Direct
Name: yxaM [H]
Synonym: Kole_1187
Alternate gene names: 239617569
Gene position: 1259914-1261086 (Clockwise)
Preceding gene: 239617568
Following gene: 239617570
Centisome position: 54.73
GC content: 42.2
Gene sequence:
>1173_bases TTGGTTAAAAGAAATCTTGTTGTTTATCCTCTTTACAGGTTTTTCATAAATATGCTTATAATAGGGCCAATATTGGTTCC CTTTATGCTCTTCAAGGGATTGAGCTACTCTCAAATTATGCTGCTTCAGTCCATAGCAGCTATATCGGTATTTGTATTTG AAGTGCCTACTGGTGCCATTGCGGATAAATTTTCAAGGAAAATTTCTCTTTTCCTTTCAGGGGTATTTGCGGCCATCGCG ACACTACTCTATATACTTTTCAGAAATTTTTATGTTTTTGCCCTGGCGGAAGTATTGTTCGGGCTTGGTTTGACACTGGC CAGTGGAGCTGATTCAGCTCTTTTGTTTGAGAGCTTGAAGAAGATTGGGAAAAAAGAAGAATATCAACGCAGGGAAGGTA ACGCCGCATCGTATATCTTCATTGGGCAAGGAGTGGGCGCTGTTCTAAGCGGGTTCCTTTACAAATACAATCATTTTCTC CCGTTCTGGATTAGCTTTGTAAACCTTTTGACGGCATCCCTGATAGCTCTGGCATTTGTTGAGGTGGAGCGCGAGAAAAG TGAACACAAATATACCGCTCACATCCTAAAAAGCTTTGGTATAGCCTTCAAAACCCCGCGTATATTATGGGCTGTGTGTT TTGCCGCGTTGATGGGTTTCATTGTAAGAGTTGGTTACTGGATGTACCAACCCTATTTTGCACAGGTGGATCTGGATATC GCATGGTATGGGATAGTTTTCTTCTTTTTCAATATGGTTGCAGCTTTCAGCTCTCACTTTCTTGTTAGGCGTTATTCGGA TGAAAGACCCAGACGGGTGTTACTCGGCCTGAGCACCCTTATGGCGCTGAGCTTCATTTTGCCCATTATATTTGTGGCAA AATGGGCGATAGCTTTACTGGCGCTTCAGCAGATTGTTAGAGGATTGTACAGACCAACGATGAACTTCTATATAAACCAC CAGATCCAGGACAAATACAGGGCAACGGTGATATCCACAGTGAGCCTTGTTTCAAACCTTAGTTTCGCAATTCTTTCGCC CGTTGTTGGGATTATGCTGGATGAAAAGGGAACGATACCAAGTTATCTGTTTGTTGGAATTGTTGCTGCTTCAGGAACGC TAGCATTGTACTTGTTGCGGAAAAAACAAAAAGCTATAAAAGTCAATTCATAG
Upstream 100 bases:
>100_bases AGGCCGTTTTTTCGAATGGGAGATACCACGACGTCCTCATGATGAGTATTCTTGCTGAAGAATACTTCAAACCCTGAATT AGGTAAGGGAGGGAAAACAA
Downstream 100 bases:
>100_bases AAAATTTTGGAGGTGCTTGAAGTGAAGAAACTCGATCTTATCCTCTGCATTCTTGTGCTGGTTATGGTAATCCTCAACGG TGTGTTTTTGTACAGAAACT
Product: major facilitator superfamily MFS_1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 390; Mature: 390
Protein sequence:
>390_residues MVKRNLVVYPLYRFFINMLIIGPILVPFMLFKGLSYSQIMLLQSIAAISVFVFEVPTGAIADKFSRKISLFLSGVFAAIA TLLYILFRNFYVFALAEVLFGLGLTLASGADSALLFESLKKIGKKEEYQRREGNAASYIFIGQGVGAVLSGFLYKYNHFL PFWISFVNLLTASLIALAFVEVEREKSEHKYTAHILKSFGIAFKTPRILWAVCFAALMGFIVRVGYWMYQPYFAQVDLDI AWYGIVFFFFNMVAAFSSHFLVRRYSDERPRRVLLGLSTLMALSFILPIIFVAKWAIALLALQQIVRGLYRPTMNFYINH QIQDKYRATVISTVSLVSNLSFAILSPVVGIMLDEKGTIPSYLFVGIVAASGTLALYLLRKKQKAIKVNS
Sequences:
>Translated_390_residues MVKRNLVVYPLYRFFINMLIIGPILVPFMLFKGLSYSQIMLLQSIAAISVFVFEVPTGAIADKFSRKISLFLSGVFAAIA TLLYILFRNFYVFALAEVLFGLGLTLASGADSALLFESLKKIGKKEEYQRREGNAASYIFIGQGVGAVLSGFLYKYNHFL PFWISFVNLLTASLIALAFVEVEREKSEHKYTAHILKSFGIAFKTPRILWAVCFAALMGFIVRVGYWMYQPYFAQVDLDI AWYGIVFFFFNMVAAFSSHFLVRRYSDERPRRVLLGLSTLMALSFILPIIFVAKWAIALLALQQIVRGLYRPTMNFYINH QIQDKYRATVISTVSLVSNLSFAILSPVVGIMLDEKGTIPSYLFVGIVAASGTLALYLLRKKQKAIKVNS >Mature_390_residues MVKRNLVVYPLYRFFINMLIIGPILVPFMLFKGLSYSQIMLLQSIAAISVFVFEVPTGAIADKFSRKISLFLSGVFAAIA TLLYILFRNFYVFALAEVLFGLGLTLASGADSALLFESLKKIGKKEEYQRREGNAASYIFIGQGVGAVLSGFLYKYNHFL PFWISFVNLLTASLIALAFVEVEREKSEHKYTAHILKSFGIAFKTPRILWAVCFAALMGFIVRVGYWMYQPYFAQVDLDI AWYGIVFFFFNMVAAFSSHFLVRRYSDERPRRVLLGLSTLMALSFILPIIFVAKWAIALLALQQIVRGLYRPTMNFYINH QIQDKYRATVISTVSLVSNLSFAILSPVVGIMLDEKGTIPSYLFVGIVAASGTLALYLLRKKQKAIKVNS
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 44040; Mature: 44040
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKRNLVVYPLYRFFINMLIIGPILVPFMLFKGLSYSQIMLLQSIAAISVFVFEVPTGAI CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHH ADKFSRKISLFLSGVFAAIATLLYILFRNFYVFALAEVLFGLGLTLASGADSALLFESLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHH KIGKKEEYQRREGNAASYIFIGQGVGAVLSGFLYKYNHFLPFWISFVNLLTASLIALAFV HHCCHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH EVEREKSEHKYTAHILKSFGIAFKTPRILWAVCFAALMGFIVRVGYWMYQPYFAQVDLDI HHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHH AWYGIVFFFFNMVAAFSSHFLVRRYSDERPRRVLLGLSTLMALSFILPIIFVAKWAIALL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALQQIVRGLYRPTMNFYINHQIQDKYRATVISTVSLVSNLSFAILSPVVGIMLDEKGTIP HHHHHHHHHHCCCHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH SYLFVGIVAASGTLALYLLRKKQKAIKVNS HHHHHHHHHHCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MVKRNLVVYPLYRFFINMLIIGPILVPFMLFKGLSYSQIMLLQSIAAISVFVFEVPTGAI CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHH ADKFSRKISLFLSGVFAAIATLLYILFRNFYVFALAEVLFGLGLTLASGADSALLFESLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHH KIGKKEEYQRREGNAASYIFIGQGVGAVLSGFLYKYNHFLPFWISFVNLLTASLIALAFV HHCCHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH EVEREKSEHKYTAHILKSFGIAFKTPRILWAVCFAALMGFIVRVGYWMYQPYFAQVDLDI HHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHH AWYGIVFFFFNMVAAFSSHFLVRRYSDERPRRVLLGLSTLMALSFILPIIFVAKWAIALL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALQQIVRGLYRPTMNFYINHQIQDKYRATVISTVSLVSNLSFAILSPVVGIMLDEKGTIP HHHHHHHHHHCCCHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH SYLFVGIVAASGTLALYLLRKKQKAIKVNS HHHHHHHHHHCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7584049; 9384377 [H]