| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239617549
Identifier: 239617549
GI number: 239617549
Start: 1235170
End: 1235607
Strand: Reverse
Name: 239617549
Synonym: Kole_1167
Alternate gene names: NA
Gene position: 1235607-1235170 (Counterclockwise)
Preceding gene: 239617551
Following gene: 239617548
Centisome position: 53.67
GC content: 46.12
Gene sequence:
>438_bases ATGAGAAAAAGAGGATTTTCACTCGTTGAACTTTTGATCGTTTTGGCGGTTATCGCTGCGTTAATCGCTACAATCACACC GGTTGCTTTGAACGCTATCAAGAAGGCGCAGGCTACAAAGGTTGCACAGAACCTGAAAACACTTGCTAGCTCCTTTGAGA ACAAGGCATATGTTGATGGCGTAGCTCCATCATCCATCAGCGATCTTGGAAGAGACATCGACACAACCAAGTACGGTGTT GCTTATACAGAGTCCGCCGGAGATTACACAGTCGTAGTATTCACAACAGAAGATGTCGACTTCAACACTGTTCAGGGAAT CCTGAAGGATGCGGTATCTTCCGATCCAGGTACCAGTGGTTACACTTTCCTGAGTGGTGGTCTTAGCAGCACAGCTGGCG GAACAGTATTCTACGAATTCAGCTTTGTAGTCTATTGA
Upstream 100 bases:
>100_bases CTCGGACTCTCGGTTCTCGGATTCTCGTGTATTCAGTTGGCACGATTTTGTATATAAATAGTCGAGGCAAAAATTCCAAT TTTTAGAGGAGGGGTATTAA
Downstream 100 bases:
>100_bases TGAATTCAAATAACAAAAAGCCTCCCATGTGGGAGGCTTTTTTTGTTGTAAAGGATCTCTACCATATACCTTTGTTCACC GTTAAAATGCTATAATCATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MRKRGFSLVELLIVLAVIAALIATITPVALNAIKKAQATKVAQNLKTLASSFENKAYVDGVAPSSISDLGRDIDTTKYGV AYTESAGDYTVVVFTTEDVDFNTVQGILKDAVSSDPGTSGYTFLSGGLSSTAGGTVFYEFSFVVY
Sequences:
>Translated_145_residues MRKRGFSLVELLIVLAVIAALIATITPVALNAIKKAQATKVAQNLKTLASSFENKAYVDGVAPSSISDLGRDIDTTKYGV AYTESAGDYTVVVFTTEDVDFNTVQGILKDAVSSDPGTSGYTFLSGGLSSTAGGTVFYEFSFVVY >Mature_145_residues MRKRGFSLVELLIVLAVIAALIATITPVALNAIKKAQATKVAQNLKTLASSFENKAYVDGVAPSSISDLGRDIDTTKYGV AYTESAGDYTVVVFTTEDVDFNTVQGILKDAVSSDPGTSGYTFLSGGLSSTAGGTVFYEFSFVVY
Specific function: Unknown
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15282; Mature: 15282
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKRGFSLVELLIVLAVIAALIATITPVALNAIKKAQATKVAQNLKTLASSFENKAYVDG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECC VAPSSISDLGRDIDTTKYGVAYTESAGDYTVVVFTTEDVDFNTVQGILKDAVSSDPGTSG CCCCHHHHHCCCCCCCCCCEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCC YTFLSGGLSSTAGGTVFYEFSFVVY CEEEECCCCCCCCCEEEEEEEEEEC >Mature Secondary Structure MRKRGFSLVELLIVLAVIAALIATITPVALNAIKKAQATKVAQNLKTLASSFENKAYVDG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECC VAPSSISDLGRDIDTTKYGVAYTESAGDYTVVVFTTEDVDFNTVQGILKDAVSSDPGTSG CCCCHHHHHCCCCCCCCCCEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCC YTFLSGGLSSTAGGTVFYEFSFVVY CEEEECCCCCCCCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA