| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239617532
Identifier: 239617532
GI number: 239617532
Start: 1217061
End: 1217579
Strand: Reverse
Name: 239617532
Synonym: Kole_1148
Alternate gene names: NA
Gene position: 1217579-1217061 (Counterclockwise)
Preceding gene: 239617533
Following gene: 239617531
Centisome position: 52.89
GC content: 35.26
Gene sequence:
>519_bases ATGCGAACGTCAAAGATGAAAAAAGATGAAAGGGGATATATTATGACTACTATACTTATAAACATCTTTGCTCTCAGCTG CTTGATTTTTGCTTTAATCAAAGATAGGGAAAAAGCAAAAAAATCATTAATGATATCACTGAAGTCATTCTTTCGTATTC TTCCAACTATGCTTATTATCATTGTCTTTATAGGTTTGCTTTTAGGTTTTGTGCCACAAAGCCAAATCTCCAGGATTGTT GGTGAACAGGCAGGTTTTTTTGGAATACTCGTTATTGCATCATTGGGAGCGATCTTACATATCCCTTCTTTAATTTCATT TCCCTTAGGAGCGTCGCTTCTTGAAAGTGGAGCTTCAGTTACAGCAGTTGCAGTTTTTATTACCACATTAACTATGATTG GAGTAGTTACCCTACCGGTAGAAATAAAAGAACTAGGAAAGAAAATGGCTTTACTCAGAAACGGGATAAGCTTCATCATA GCAATTATTATTGCGCTTATTATGGGAGTGATACTATGA
Upstream 100 bases:
>100_bases TCAAAATCCCCTTTCATCTTGTACACACAAAAACTTGGAAAAAATAGAATCGAAAAAATCTTGACAAAAGAAATATTGCT GTTATAGTATAGGCACATAT
Downstream 100 bases:
>100_bases AAGAGTCTCTAAAGGAAAAGCAAAAAAAAGAAATTATGCGAGATTTGATCTTTTTAGGAATTACTTTGGTAACCGCGATA ATTTTGCTATCAATTTTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MRTSKMKKDERGYIMTTILINIFALSCLIFALIKDREKAKKSLMISLKSFFRILPTMLIIIVFIGLLLGFVPQSQISRIV GEQAGFFGILVIASLGAILHIPSLISFPLGASLLESGASVTAVAVFITTLTMIGVVTLPVEIKELGKKMALLRNGISFII AIIIALIMGVIL
Sequences:
>Translated_172_residues MRTSKMKKDERGYIMTTILINIFALSCLIFALIKDREKAKKSLMISLKSFFRILPTMLIIIVFIGLLLGFVPQSQISRIV GEQAGFFGILVIASLGAILHIPSLISFPLGASLLESGASVTAVAVFITTLTMIGVVTLPVEIKELGKKMALLRNGISFII AIIIALIMGVIL >Mature_172_residues MRTSKMKKDERGYIMTTILINIFALSCLIFALIKDREKAKKSLMISLKSFFRILPTMLIIIVFIGLLLGFVPQSQISRIV GEQAGFFGILVIASLGAILHIPSLISFPLGASLLESGASVTAVAVFITTLTMIGVVTLPVEIKELGKKMALLRNGISFII AIIIALIMGVIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18649; Mature: 18649
Theoretical pI: Translated: 10.88; Mature: 10.88
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTSKMKKDERGYIMTTILINIFALSCLIFALIKDREKAKKSLMISLKSFFRILPTMLII CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVFIGLLLGFVPQSQISRIVGEQAGFFGILVIASLGAILHIPSLISFPLGASLLESGASV HHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHH TAVAVFITTLTMIGVVTLPVEIKELGKKMALLRNGISFIIAIIIALIMGVIL HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MRTSKMKKDERGYIMTTILINIFALSCLIFALIKDREKAKKSLMISLKSFFRILPTMLII CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVFIGLLLGFVPQSQISRIVGEQAGFFGILVIASLGAILHIPSLISFPLGASLLESGASV HHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHH TAVAVFITTLTMIGVVTLPVEIKELGKKMALLRNGISFIIAIIIALIMGVIL HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA