| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239617525
Identifier: 239617525
GI number: 239617525
Start: 1211247
End: 1212461
Strand: Reverse
Name: 239617525
Synonym: Kole_1141
Alternate gene names: NA
Gene position: 1212461-1211247 (Counterclockwise)
Preceding gene: 239617526
Following gene: 239617524
Centisome position: 52.67
GC content: 39.92
Gene sequence:
>1215_bases GTGGGAAACTTTGACAAAGAAGCAATGAAGAGATTGGTACGAGAGAGGAAATTAAAGACAACAGAAGACGCGGAAAATCT TGTAAAAGAATTATTTGGAGACATCATTAAAGAGATGCTGGAAACGGAACTTGAAGAAGAACTGGGCTATTCCAAGCATG ACTATAGGAACAAAGAAACGGATAACTCCCGAAACGGTTATTCGAAAAAAACAGTGAATACCTCATATGGCAAAATAGAG CTTTCAATTCCCAGGGATCGAAAAGGTGAATTCGAACCAATAGTGGTTAAAAAGCACCAGCGAAGCATAGCTTCCATAGA GGACCAGATATTGTCTATGTATGCCCGGGGAATGACATACAGGGACATACAGGCACATCTTAAGGACATATACGGCTCTG AATTGTCAACTGAAAGCATAAGCAGGATAACAGACAAGATAATACCCATCGTTTCCGAATGGAGAAACAGACCCCTTGAA GAGGTATATACCATAATCTACATGGATGCTATCTTTTTCAAAGTCTCTGAGAACAACCAGATAAGAAATAAGGCTTTGTA TATAGCCTTTGGGATAAATCTGGAAGGAATGAAAGATGTCCTAGGAATGTGGATAGCTCAGAGTGAAGGTTCAAAATACT GGCTTGGTGTGCTAAATGAGCTGAAAAACCGAGGTGTCAAAGGAGTGATGTTCTTTTCAATAGACGGATTAAAGGGAATG GAAGAGGCAATAGAAGCGGTATATCCCCAGGCTAAAATCCAGAGATGCGTAGTACACCAGATAAGATATTCCATGAAATT TGTATCCTGGAAAGACAAAAAGAAATTCGCTGCTGACCTGAAATCGGTATACACAGCAGACACAAGAGAAGCAGCATGGA ACGCCCTTATGGCTTTTGAAGAGAAATGGGGAGAAAAGTATCCTTTCAGCATTAAAAGCTGGAAAGACAACTGGGAATCC CTCACGACCTATTTCGAATATCCCAAAGAGATTAGAAAATTGATTTACACAACCAATCCAATAGAATCCCTGAACAGCCA ACTCAGGAAGGTAACAAAGAACAGAGGTGTTTTTCCCAATGACATGGCTCTCATGAAACTGGCATATCTCGCCATTAACA ATATAACTAGAAAATGGACCGTGAGAATAAATGAATGGGATAAAATCCTTGCCACTTTGATGATAGAATTTGATTGGGTG AAATCCTATGTCTGA
Upstream 100 bases:
>100_bases GCGAAGCGGTTCAGAACAACCACGTAGGGGTCTGTTAGCAATTTTGTGTAAACTCCCTCCGAAATATGAGAAAATAACAA AAAGCTAAGGAGGGAGAACA
Downstream 100 bases:
>100_bases TCTTTTCCGGAGTTTGGGGTTTACACAAAATATGTGACACGCCCCCACGTAGTGGTTCTAGTCAACTCCGCAGGAGTTCG TGTCAATCCCGAAAGGGATT
Product: transposase mutator type
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 404; Mature: 403
Protein sequence:
>404_residues MGNFDKEAMKRLVRERKLKTTEDAENLVKELFGDIIKEMLETELEEELGYSKHDYRNKETDNSRNGYSKKTVNTSYGKIE LSIPRDRKGEFEPIVVKKHQRSIASIEDQILSMYARGMTYRDIQAHLKDIYGSELSTESISRITDKIIPIVSEWRNRPLE EVYTIIYMDAIFFKVSENNQIRNKALYIAFGINLEGMKDVLGMWIAQSEGSKYWLGVLNELKNRGVKGVMFFSIDGLKGM EEAIEAVYPQAKIQRCVVHQIRYSMKFVSWKDKKKFAADLKSVYTADTREAAWNALMAFEEKWGEKYPFSIKSWKDNWES LTTYFEYPKEIRKLIYTTNPIESLNSQLRKVTKNRGVFPNDMALMKLAYLAINNITRKWTVRINEWDKILATLMIEFDWV KSYV
Sequences:
>Translated_404_residues MGNFDKEAMKRLVRERKLKTTEDAENLVKELFGDIIKEMLETELEEELGYSKHDYRNKETDNSRNGYSKKTVNTSYGKIE LSIPRDRKGEFEPIVVKKHQRSIASIEDQILSMYARGMTYRDIQAHLKDIYGSELSTESISRITDKIIPIVSEWRNRPLE EVYTIIYMDAIFFKVSENNQIRNKALYIAFGINLEGMKDVLGMWIAQSEGSKYWLGVLNELKNRGVKGVMFFSIDGLKGM EEAIEAVYPQAKIQRCVVHQIRYSMKFVSWKDKKKFAADLKSVYTADTREAAWNALMAFEEKWGEKYPFSIKSWKDNWES LTTYFEYPKEIRKLIYTTNPIESLNSQLRKVTKNRGVFPNDMALMKLAYLAINNITRKWTVRINEWDKILATLMIEFDWV KSYV >Mature_403_residues GNFDKEAMKRLVRERKLKTTEDAENLVKELFGDIIKEMLETELEEELGYSKHDYRNKETDNSRNGYSKKTVNTSYGKIEL SIPRDRKGEFEPIVVKKHQRSIASIEDQILSMYARGMTYRDIQAHLKDIYGSELSTESISRITDKIIPIVSEWRNRPLEE VYTIIYMDAIFFKVSENNQIRNKALYIAFGINLEGMKDVLGMWIAQSEGSKYWLGVLNELKNRGVKGVMFFSIDGLKGME EAIEAVYPQAKIQRCVVHQIRYSMKFVSWKDKKKFAADLKSVYTADTREAAWNALMAFEEKWGEKYPFSIKSWKDNWESL TTYFEYPKEIRKLIYTTNPIESLNSQLRKVTKNRGVFPNDMALMKLAYLAINNITRKWTVRINEWDKILATLMIEFDWVK SYV
Specific function: Required for the transposition of the insertion element [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase mutator family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001207 [H]
Pfam domain/function: PF00872 Transposase_mut [H]
EC number: NA
Molecular weight: Translated: 47420; Mature: 47289
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: PS01007 TRANSPOSASE_MUTATOR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNFDKEAMKRLVRERKLKTTEDAENLVKELFGDIIKEMLETELEEELGYSKHDYRNKET CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC DNSRNGYSKKTVNTSYGKIELSIPRDRKGEFEPIVVKKHQRSIASIEDQILSMYARGMTY CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCH RDIQAHLKDIYGSELSTESISRITDKIIPIVSEWRNRPLEEVYTIIYMDAIFFKVSENNQ HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEECCCCC IRNKALYIAFGINLEGMKDVLGMWIAQSEGSKYWLGVLNELKNRGVKGVMFFSIDGLKGM CCCEEEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCHH EEAIEAVYPQAKIQRCVVHQIRYSMKFVSWKDKKKFAADLKSVYTADTREAAWNALMAFE HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH EKWGEKYPFSIKSWKDNWESLTTYFEYPKEIRKLIYTTNPIESLNSQLRKVTKNRGVFPN HHHCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC DMALMKLAYLAINNITRKWTVRINEWDKILATLMIEFDWVKSYV HHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GNFDKEAMKRLVRERKLKTTEDAENLVKELFGDIIKEMLETELEEELGYSKHDYRNKET CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC DNSRNGYSKKTVNTSYGKIELSIPRDRKGEFEPIVVKKHQRSIASIEDQILSMYARGMTY CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCH RDIQAHLKDIYGSELSTESISRITDKIIPIVSEWRNRPLEEVYTIIYMDAIFFKVSENNQ HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEECCCCC IRNKALYIAFGINLEGMKDVLGMWIAQSEGSKYWLGVLNELKNRGVKGVMFFSIDGLKGM CCCEEEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCHH EEAIEAVYPQAKIQRCVVHQIRYSMKFVSWKDKKKFAADLKSVYTADTREAAWNALMAFE HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH EKWGEKYPFSIKSWKDNWESLTTYFEYPKEIRKLIYTTNPIESLNSQLRKVTKNRGVFPN HHHCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC DMALMKLAYLAINNITRKWTVRINEWDKILATLMIEFDWVKSYV HHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1849509; 1327271; 11481430; 11481432 [H]