| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239617477
Identifier: 239617477
GI number: 239617477
Start: 1160543
End: 1161736
Strand: Reverse
Name: 239617477
Synonym: Kole_1093
Alternate gene names: NA
Gene position: 1161736-1160543 (Counterclockwise)
Preceding gene: 239617478
Following gene: 239617476
Centisome position: 50.46
GC content: 43.05
Gene sequence:
>1194_bases TTGTTTAGAAGGGATATCGTCGAAGAAGCGGTCATAGAGCTGGGAAGAAGAAGTCCCTTTTACAACTATTTGTTTTTATT TATAGAAAGAGTTCGGAGTTCCACCGTCAGGACATTCAAGCTCAGGGTTTCATCGAGAGGTAATCTACAACTTCTGTACA ATCCGGAAGTACTAAGAGACAAACCGTTAGAACTTGTTGTTGCCTTGCTTGAACATGAGGCCCTTCATATAGTCAACGGC CACATTTTGATACCGGTAAAGGAAAAAAGAGACAGACTACTCTGGGACTTATGCATGGACGCAGCTATAAATCAATTCAT ACCCGTTCTCGACGCTTTCAGCCTTCCCCTTGATGAACTTTTGATGGAAGGGTGCGGAACAGATAATGAGAGAATGTTCA TTGCTCCACCGGCATTTCTACCAAACCAAACCGCTGAATATTACCACGATTGGGCAGTAGAATTCATGAAAAAGAATAAA ACGATAGACCTCGAGCTCATAGAGACCAACCTTGAAAAAACCGATTCTCACGAGGACTTCGGAAACTTCGAGCTCCCAAA AGAATTCGTTCAGGAATTGTTGAATAACGTTGTTGCGGAAACCTACAGAAAGGCAAAAGACGGTCTTCCTGAAGGCCTGG AGCATGTTGTAACTTTATTCCTCGATAGGCCAATACTCGATTGGCGAACGATGATCAGACGATTCTTTGGTTCATCGGTA CACGTTGGAAGATATCGAACCCCTTTGAGACCAAATAGAAGATACGACGATCAACCGGGGTGGCGAAACGATTACGCGGC AAAAATTGTTGTCGTTCTCGATACCAGCGGAAGCATAATTGAAGACGAATTCAATGCCTTTTTCAGTGAAATAGATATTG TCACAAGATTGACGGATTCGCGGATCTGGCTTGTTCAGGTAGATGAAACCGTGCAATCTGTAATGAAATACGGTAAAGGA ATGTGGAAAGATTTGAAACTCATAGGGCGCGGTGAAACTGACCTACAACCAGCCATCGATTACGCCCAGGAAAACCTGAG ACCTGAAGGTATCATAGTTTTCACCGATGGTTACACTGATTTGCCTCTGGTAAAGCGCAAGGTTCTTTTCGTTTTATCCA GGCAGTGTAATAAAGAATTTGTGGAAGAAGCAAAAGAAGTTTATGGTCGTTCATCGGTGGTGGTATTAAGATGA
Upstream 100 bases:
>100_bases AACGAAAAGGGTTTAAAAAGAGTCTTTTTTGAGAATTTACTGGAAGAACTGGCAACAGATTCCGATGTCCTCAACTATCT TGAAAAGAGGGAGAATTGAT
Downstream 100 bases:
>100_bases TATTGTTCGAAGGACCAGAGTCAATCAAAGGTATTTTAGAAAAGTACTACGTAGAACTTGAACTCGAGTTCAAAGAAGAA GCCAAGTTGTTAAAAAACAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MFRRDIVEEAVIELGRRSPFYNYLFLFIERVRSSTVRTFKLRVSSRGNLQLLYNPEVLRDKPLELVVALLEHEALHIVNG HILIPVKEKRDRLLWDLCMDAAINQFIPVLDAFSLPLDELLMEGCGTDNERMFIAPPAFLPNQTAEYYHDWAVEFMKKNK TIDLELIETNLEKTDSHEDFGNFELPKEFVQELLNNVVAETYRKAKDGLPEGLEHVVTLFLDRPILDWRTMIRRFFGSSV HVGRYRTPLRPNRRYDDQPGWRNDYAAKIVVVLDTSGSIIEDEFNAFFSEIDIVTRLTDSRIWLVQVDETVQSVMKYGKG MWKDLKLIGRGETDLQPAIDYAQENLRPEGIIVFTDGYTDLPLVKRKVLFVLSRQCNKEFVEEAKEVYGRSSVVVLR
Sequences:
>Translated_397_residues MFRRDIVEEAVIELGRRSPFYNYLFLFIERVRSSTVRTFKLRVSSRGNLQLLYNPEVLRDKPLELVVALLEHEALHIVNG HILIPVKEKRDRLLWDLCMDAAINQFIPVLDAFSLPLDELLMEGCGTDNERMFIAPPAFLPNQTAEYYHDWAVEFMKKNK TIDLELIETNLEKTDSHEDFGNFELPKEFVQELLNNVVAETYRKAKDGLPEGLEHVVTLFLDRPILDWRTMIRRFFGSSV HVGRYRTPLRPNRRYDDQPGWRNDYAAKIVVVLDTSGSIIEDEFNAFFSEIDIVTRLTDSRIWLVQVDETVQSVMKYGKG MWKDLKLIGRGETDLQPAIDYAQENLRPEGIIVFTDGYTDLPLVKRKVLFVLSRQCNKEFVEEAKEVYGRSSVVVLR >Mature_397_residues MFRRDIVEEAVIELGRRSPFYNYLFLFIERVRSSTVRTFKLRVSSRGNLQLLYNPEVLRDKPLELVVALLEHEALHIVNG HILIPVKEKRDRLLWDLCMDAAINQFIPVLDAFSLPLDELLMEGCGTDNERMFIAPPAFLPNQTAEYYHDWAVEFMKKNK TIDLELIETNLEKTDSHEDFGNFELPKEFVQELLNNVVAETYRKAKDGLPEGLEHVVTLFLDRPILDWRTMIRRFFGSSV HVGRYRTPLRPNRRYDDQPGWRNDYAAKIVVVLDTSGSIIEDEFNAFFSEIDIVTRLTDSRIWLVQVDETVQSVMKYGKG MWKDLKLIGRGETDLQPAIDYAQENLRPEGIIVFTDGYTDLPLVKRKVLFVLSRQCNKEFVEEAKEVYGRSSVVVLR
Specific function: Unknown
COG id: COG3864
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018698 [H]
Pfam domain/function: PF09967 DUF2201 [H]
EC number: NA
Molecular weight: Translated: 46240; Mature: 46240
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRRDIVEEAVIELGRRSPFYNYLFLFIERVRSSTVRTFKLRVSSRGNLQLLYNPEVLRD CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEEEEEECCCCCEEEEECCHHHCC KPLELVVALLEHEALHIVNGHILIPVKEKRDRLLWDLCMDAAINQFIPVLDAFSLPLDEL CHHHHHHHHHHCCCEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH LMEGCGTDNERMFIAPPAFLPNQTAEYYHDWAVEFMKKNKTIDLELIETNLEKTDSHEDF HHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCC GNFELPKEFVQELLNNVVAETYRKAKDGLPEGLEHVVTLFLDRPILDWRTMIRRFFGSSV CCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCE HVGRYRTPLRPNRRYDDQPGWRNDYAAKIVVVLDTSGSIIEDEFNAFFSEIDIVTRLTDS ECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHEECCC RIWLVQVDETVQSVMKYGKGMWKDLKLIGRGETDLQPAIDYAQENLRPEGIIVFTDGYTD EEEEEEEHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCC LPLVKRKVLFVLSRQCNKEFVEEAKEVYGRSSVVVLR CHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEC >Mature Secondary Structure MFRRDIVEEAVIELGRRSPFYNYLFLFIERVRSSTVRTFKLRVSSRGNLQLLYNPEVLRD CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEEEEEECCCCCEEEEECCHHHCC KPLELVVALLEHEALHIVNGHILIPVKEKRDRLLWDLCMDAAINQFIPVLDAFSLPLDEL CHHHHHHHHHHCCCEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH LMEGCGTDNERMFIAPPAFLPNQTAEYYHDWAVEFMKKNKTIDLELIETNLEKTDSHEDF HHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCC GNFELPKEFVQELLNNVVAETYRKAKDGLPEGLEHVVTLFLDRPILDWRTMIRRFFGSSV CCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCE HVGRYRTPLRPNRRYDDQPGWRNDYAAKIVVVLDTSGSIIEDEFNAFFSEIDIVTRLTDS ECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHEECCC RIWLVQVDETVQSVMKYGKGMWKDLKLIGRGETDLQPAIDYAQENLRPEGIIVFTDGYTD EEEEEEEHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCC LPLVKRKVLFVLSRQCNKEFVEEAKEVYGRSSVVVLR CHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8168477; 10360571 [H]