| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239617441
Identifier: 239617441
GI number: 239617441
Start: 1124104
End: 1125021
Strand: Reverse
Name: 239617441
Synonym: Kole_1056
Alternate gene names: NA
Gene position: 1125021-1124104 (Counterclockwise)
Preceding gene: 239617442
Following gene: 239617440
Centisome position: 48.87
GC content: 37.04
Gene sequence:
>918_bases ATGTCATTAAGAAAATCATTAATGCTTTTCACAGTTTTACTGGTTCTTTCAACACTTTTGATTGCAGATGAGATGGGAAG AACGATAACAGTCAATCCAGAAGGTGACATAAATTCACTTCAAAAAGCTATTGATATCGCTCAAAATGGTGACATTATTA AAGTCATGCCAGGTGTTTATAATACAAAAGCTGTCATAAACAAATCCCTTGAGATAGTTGGTGAGAAAGGAAAAGTTTAT TTTGAACCAGTTGATTCGGAAATCCCCATGATCGTTGTTATTGGTTCTGATGAACTAAAATTTGAGGGGATAAAATTCAG AGGGGATGGAAGGCTTTTTCAAATTATAATGAGCAACGTGAGCTTCAGAAATTGTAAGTTTGAGACCTCCGGCACCGCTA TATTATTTTCTGGTGGATCGCTTTCGATATCTACCTCGGTATTCAATGGTGTTAGGGAAAAAATCCAAGGAGGTTTCACA TACCGTGGGACAGCGTTGCTTGTATCAGCAGCTAATAACATAGAATTCACCAACAACCTGGTAAAACACATGGGAACAGG TCTTCTTGTAAGCAACGTAGATACGCTATACAGTCAGAACAACGAATTTTCCGAAAATGTTATTGGTGCAAAGTTTATTG ATGTCTTGGAACTAGGTTTATCGGAGAATATTTTCTATCGCAACCACGTTGCAGTAATACTATCCGGAAAAGGTAATTGT TTTCTGGAAAGCAATATTTTTTCTAAATCTACAAAATGGGATTTGAGCCTTTCCACAGAAGAATGCAGGCTATGTTCAAA ATGTGTCGAAAAACCCTTCGATGGATCAATATCTGGAAGAGAAAACATCTCCGATAGTTACGGTTTCTGTCCAGAGGACT CTATTGAAATATTGAAGCTATTTGCTAGAAAGGATTGA
Upstream 100 bases:
>100_bases GTATTCACTTCTCGATACTCCTTATGAGACATGCTGTCGCCGTGAAGTAGGCCTGAATTTGAAGCAAAGCTTTTTAATGT GAATTATGGGGGGGACAGGT
Downstream 100 bases:
>100_bases TGAATTTCCTTCGACTCCCAAATATGGAACAAAAACTATATACTGCTCCCCTGAAGAATTGAACAGGTAAAAAGTAGAGA ACCAGAATAAAGACAAAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MSLRKSLMLFTVLLVLSTLLIADEMGRTITVNPEGDINSLQKAIDIAQNGDIIKVMPGVYNTKAVINKSLEIVGEKGKVY FEPVDSEIPMIVVIGSDELKFEGIKFRGDGRLFQIIMSNVSFRNCKFETSGTAILFSGGSLSISTSVFNGVREKIQGGFT YRGTALLVSAANNIEFTNNLVKHMGTGLLVSNVDTLYSQNNEFSENVIGAKFIDVLELGLSENIFYRNHVAVILSGKGNC FLESNIFSKSTKWDLSLSTEECRLCSKCVEKPFDGSISGRENISDSYGFCPEDSIEILKLFARKD
Sequences:
>Translated_305_residues MSLRKSLMLFTVLLVLSTLLIADEMGRTITVNPEGDINSLQKAIDIAQNGDIIKVMPGVYNTKAVINKSLEIVGEKGKVY FEPVDSEIPMIVVIGSDELKFEGIKFRGDGRLFQIIMSNVSFRNCKFETSGTAILFSGGSLSISTSVFNGVREKIQGGFT YRGTALLVSAANNIEFTNNLVKHMGTGLLVSNVDTLYSQNNEFSENVIGAKFIDVLELGLSENIFYRNHVAVILSGKGNC FLESNIFSKSTKWDLSLSTEECRLCSKCVEKPFDGSISGRENISDSYGFCPEDSIEILKLFARKD >Mature_304_residues SLRKSLMLFTVLLVLSTLLIADEMGRTITVNPEGDINSLQKAIDIAQNGDIIKVMPGVYNTKAVINKSLEIVGEKGKVYF EPVDSEIPMIVVIGSDELKFEGIKFRGDGRLFQIIMSNVSFRNCKFETSGTAILFSGGSLSISTSVFNGVREKIQGGFTY RGTALLVSAANNIEFTNNLVKHMGTGLLVSNVDTLYSQNNEFSENVIGAKFIDVLELGLSENIFYRNHVAVILSGKGNCF LESNIFSKSTKWDLSLSTEECRLCSKCVEKPFDGSISGRENISDSYGFCPEDSIEILKLFARKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33556; Mature: 33425
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLRKSLMLFTVLLVLSTLLIADEMGRTITVNPEGDINSLQKAIDIAQNGDIIKVMPGVY CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCC NTKAVINKSLEIVGEKGKVYFEPVDSEIPMIVVIGSDELKFEGIKFRGDGRLFQIIMSNV CCHHHHHCCCEEEECCCEEEEEECCCCCCEEEEECCCCEEEEEEEEECCCCEEEEHHHCC SFRNCKFETSGTAILFSGGSLSISTSVFNGVREKIQGGFTYRGTALLVSAANNIEFTNNL CCCCEEEECCCCEEEEECCCEEEHHHHHHHHHHHHCCCCEEECEEEEEEECCCCHHHHHH VKHMGTGLLVSNVDTLYSQNNEFSENVIGAKFIDVLELGLSENIFYRNHVAVILSGKGNC HHHCCCCEEEECHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECEEEEEEECCCCE FLESNIFSKSTKWDLSLSTEECRLCSKCVEKPFDGSISGRENISDSYGFCPEDSIEILKL EEECCCCCCCCCEEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH FARKD HHCCC >Mature Secondary Structure SLRKSLMLFTVLLVLSTLLIADEMGRTITVNPEGDINSLQKAIDIAQNGDIIKVMPGVY CHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCC NTKAVINKSLEIVGEKGKVYFEPVDSEIPMIVVIGSDELKFEGIKFRGDGRLFQIIMSNV CCHHHHHCCCEEEECCCEEEEEECCCCCCEEEEECCCCEEEEEEEEECCCCEEEEHHHCC SFRNCKFETSGTAILFSGGSLSISTSVFNGVREKIQGGFTYRGTALLVSAANNIEFTNNL CCCCEEEECCCCEEEEECCCEEEHHHHHHHHHHHHCCCCEEECEEEEEEECCCCHHHHHH VKHMGTGLLVSNVDTLYSQNNEFSENVIGAKFIDVLELGLSENIFYRNHVAVILSGKGNC HHHCCCCEEEECHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECEEEEEEECCCCE FLESNIFSKSTKWDLSLSTEECRLCSKCVEKPFDGSISGRENISDSYGFCPEDSIEILKL EEECCCCCCCCCEEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH FARKD HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA