Click here to switch to the map view.

The map label for this gene is ydaV [C]

Identifier: 239617434

GI number: 239617434

Start: 1115879

End: 1116601

Strand: Reverse

Name: ydaV [C]

Synonym: Kole_1047

Alternate gene names: 239617434

Gene position: 1116601-1115879 (Counterclockwise)

Preceding gene: 239617435

Following gene: 239617429

Centisome position: 48.5

GC content: 39.56

Gene sequence:

>723_bases
ATGAGATTGTGCAAAAGGCTGAAAACACCGGGAATATTCAACAGTTACGAGAGAATCACTAGACAAGCTCAACAAGAAGG
CATGAGTTACATTGAATTCCTTCTGGAGATACTGGAATCGGAAGTACAATCCAGAGAAAGCAGAAACATAGTGAAGAAAA
TAAAGCGGGCAGGATTTCCAACACCCAAAAGATTTGAAGAACTCAACGAAGCAGCCCTTCCAGAAGACGCCAGGAAACAT
CTTAAAGAACTAAAATCGTTGAAATTTCTGAGCGCGAATAGAAACCTAATACTACTGGGTAACTCCGGTACAGGAAAAAC
ACATTTGGCAACGGCGATAGGAATAAAAGCCTGTGAAGAAGGATATAACGTTCTATTCAAAACAGCGGCAGGCCTAATTA
ACGAACTGAAAGAAGCAAAAGACGAAAAACAACTTGTGAGATACGCAAAACAATTCAAAAAGCTCGATCTGGTGATAATA
GACGAATTAGGATACATTTCCTTTGACATTGAAGGTGCAGAGCTGCTCTTCCAATACCTGGCAATGAGATACGAAACAAA
GAGCACGTTAATTACAACGAATCTCGTGTTCTCAGAATGGATAAAGATTTTCCATGACAAAGCGCTAACCATGGCATTGT
TAGACAGAATTACACACAACACTTTGATTCTCAATATGTCTGGAAGAAGTTACCGAAGAAGGGATATTTTAGAAGATACC
TGA

Upstream 100 bases:

>100_bases
CAATATGAAACCTTTGACTATCCTTTGAAGATACAGATAGACCACGGTGATCCTTCTGAGTTCGACAGATTGGTAGGTGT
TCACCGTGGATGAAAAACTA

Downstream 100 bases:

>100_bases
GGTGGGTAGCGGGTCATTTCCTTATGGCCCTCCCGGGTCAAAAACCTATTGACTTTATACAATTGGAAAAGTATGCATAC
AATGATATAAGTTCTAGAAT

Product: IstB domain protein ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MRLCKRLKTPGIFNSYERITRQAQQEGMSYIEFLLEILESEVQSRESRNIVKKIKRAGFPTPKRFEELNEAALPEDARKH
LKELKSLKFLSANRNLILLGNSGTGKTHLATAIGIKACEEGYNVLFKTAAGLINELKEAKDEKQLVRYAKQFKKLDLVII
DELGYISFDIEGAELLFQYLAMRYETKSTLITTNLVFSEWIKIFHDKALTMALLDRITHNTLILNMSGRSYRRRDILEDT

Sequences:

>Translated_240_residues
MRLCKRLKTPGIFNSYERITRQAQQEGMSYIEFLLEILESEVQSRESRNIVKKIKRAGFPTPKRFEELNEAALPEDARKH
LKELKSLKFLSANRNLILLGNSGTGKTHLATAIGIKACEEGYNVLFKTAAGLINELKEAKDEKQLVRYAKQFKKLDLVII
DELGYISFDIEGAELLFQYLAMRYETKSTLITTNLVFSEWIKIFHDKALTMALLDRITHNTLILNMSGRSYRRRDILEDT
>Mature_240_residues
MRLCKRLKTPGIFNSYERITRQAQQEGMSYIEFLLEILESEVQSRESRNIVKKIKRAGFPTPKRFEELNEAALPEDARKH
LKELKSLKFLSANRNLILLGNSGTGKTHLATAIGIKACEEGYNVLFKTAAGLINELKEAKDEKQLVRYAKQFKKLDLVII
DELGYISFDIEGAELLFQYLAMRYETKSTLITTNLVFSEWIKIFHDKALTMALLDRITHNTLILNMSGRSYRRRDILEDT

Specific function: Unknown

COG id: COG1484

COG function: function code L; DNA replication protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IS21/IS1162 putative ATP-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR001270
- InterPro:   IPR002611 [H]

Pfam domain/function: PF01695 IstB [H]

EC number: NA

Molecular weight: Translated: 27695; Mature: 27695

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLCKRLKTPGIFNSYERITRQAQQEGMSYIEFLLEILESEVQSRESRNIVKKIKRAGFP
CCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TPKRFEELNEAALPEDARKHLKELKSLKFLSANRNLILLGNSGTGKTHLATAIGIKACEE
CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
GYNVLFKTAAGLINELKEAKDEKQLVRYAKQFKKLDLVIIDELGYISFDIEGAELLFQYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEECCCHHHHHHHHH
AMRYETKSTLITTNLVFSEWIKIFHDKALTMALLDRITHNTLILNMSGRSYRRRDILEDT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHCCCCC
>Mature Secondary Structure
MRLCKRLKTPGIFNSYERITRQAQQEGMSYIEFLLEILESEVQSRESRNIVKKIKRAGFP
CCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TPKRFEELNEAALPEDARKHLKELKSLKFLSANRNLILLGNSGTGKTHLATAIGIKACEE
CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
GYNVLFKTAAGLINELKEAKDEKQLVRYAKQFKKLDLVIIDELGYISFDIEGAELLFQYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEECCCHHHHHHHHH
AMRYETKSTLITTNLVFSEWIKIFHDKALTMALLDRITHNTLILNMSGRSYRRRDILEDT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8382825 [H]