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The map label for this gene is ycjN [C]

Identifier: 239617426

GI number: 239617426

Start: 1104899

End: 1106185

Strand: Reverse

Name: ycjN [C]

Synonym: Kole_1038

Alternate gene names: 239617426

Gene position: 1106185-1104899 (Counterclockwise)

Preceding gene: 239617427

Following gene: 239617425

Centisome position: 48.05

GC content: 43.9

Gene sequence:

>1287_bases
GTGAGGAAAGGCTTGTTGTTGGCTTTAGTGCTGGTTGTTCTTGCCGTTGCGGTTCTCGGTGAAGTTACTTTGCAGTATTG
GTTCTGGGATCCAAACTTCCGTGACAAAGAACAGGAAATGATTGAAAGATTTGAAGCCACCCATCCTGGAATTAAGATCG
AGTTGACCGCTCTTCCCCCATCGAGTTACTGGACAAAGCTTGCTGCTATGGCTGCAGCTAAATCCCTGCCTGATGTCATG
GCCATGCATCCAAACTCCGTTGAAGATCTCGCCGATCAGGGGGCTCTAATGGACCTTACCGGTCTCATTTTGAGAGACTT
CAACAAGGAAGATTATTTCTGGAGCGTACTCGAATCAAGCTTCAATATACGTGGAAAATATTACGGTGTTCCTTTCGCAT
GGGTCGGTAGTGTTCTTTACTACAACAAGGATCTCTTCGATAAGTACGGTGTTCCTTATCCAACCGAAGATTGGACATGG
GAAGATTTCCTCGAAAGAGCCAAAGCTTTAACCATCGATGAAGATGGTGATGGAAAGATCGATATATGGGGTTACGCTTT
CTTCAGCCGTTATGCAGTATTTGATGGCTGGATACTTCAGAATGACGGTGATTACCTTGACAGAGAAAATATGAGATGGG
CACCCAACCAGAATGCAAAAGACACCATTAAGTTCCTGGCCGATCTCGTTAATGTTTACAAGGTATCTCCAAAGCCTAAG
TATTATGACCTCGACAAGAAAAAGATCAAAATATTGTTTGCGCAGGGTAAGGCAGCTATGATCACAGAGGGAACATGGAA
TATCAAATTTATGAGAGAAGACATCCCCGCTAATTTCAATTGGGATATTGCCTATATTCCCAGAGGTCCACACTGGAAAG
AAAATGTAATGCATGCCTGGGCTGATGGTCTCGCTATTGCTGCCAACTCCAAGCATCCTGAAGAAGCCTGGGAATTCATT
AAGTTCCTCATAAAAGAACGTGCAGCTAAAGATTACTATCCCGGTAAAGTCCCGTTCTACAAGGGTGAAGCATATTCTCC
TGAATGGGATGAATGGACTACTTTTGGCAAACTCCCTGAACACAAAACACTGATACTCGATTACGGTGAAAATGCCAAGC
ATTTCTACACGAAATATTGGAAGTTCTGGAGAGGCTATGGAAGTGCCGAAGGAACCGGGCTCAGCGATCTTATAGACTCT
CTATTGAACGGAAACATCACTCTCGATTACTTCTTTACCAGAGCCGACAAACAGATCAACAGGATGCTTAAAAAGGCTTA
CAAGTAA

Upstream 100 bases:

>100_bases
GACTTCGTTATAAGAAATCTCAAAGAGATAAATCTTGGTGTGTTGGAAAAGGTTCCCTCCAAAGGGGCTTTTTAGTTCAT
ACATGAGAGGAGTGAGTGTT

Downstream 100 bases:

>100_bases
ATTCGTGCTTTTACCCCTGTTTTGGCAAGCCCCTGAGGGGGTTTGCCTTATTTTTAACGTGTTGGGAGGGAGAAGATGAA
ATACAAGTGGTACGTACCTT

Product: extracellular solute-binding protein family 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MRKGLLLALVLVVLAVAVLGEVTLQYWFWDPNFRDKEQEMIERFEATHPGIKIELTALPPSSYWTKLAAMAAAKSLPDVM
AMHPNSVEDLADQGALMDLTGLILRDFNKEDYFWSVLESSFNIRGKYYGVPFAWVGSVLYYNKDLFDKYGVPYPTEDWTW
EDFLERAKALTIDEDGDGKIDIWGYAFFSRYAVFDGWILQNDGDYLDRENMRWAPNQNAKDTIKFLADLVNVYKVSPKPK
YYDLDKKKIKILFAQGKAAMITEGTWNIKFMREDIPANFNWDIAYIPRGPHWKENVMHAWADGLAIAANSKHPEEAWEFI
KFLIKERAAKDYYPGKVPFYKGEAYSPEWDEWTTFGKLPEHKTLILDYGENAKHFYTKYWKFWRGYGSAEGTGLSDLIDS
LLNGNITLDYFFTRADKQINRMLKKAYK

Sequences:

>Translated_428_residues
MRKGLLLALVLVVLAVAVLGEVTLQYWFWDPNFRDKEQEMIERFEATHPGIKIELTALPPSSYWTKLAAMAAAKSLPDVM
AMHPNSVEDLADQGALMDLTGLILRDFNKEDYFWSVLESSFNIRGKYYGVPFAWVGSVLYYNKDLFDKYGVPYPTEDWTW
EDFLERAKALTIDEDGDGKIDIWGYAFFSRYAVFDGWILQNDGDYLDRENMRWAPNQNAKDTIKFLADLVNVYKVSPKPK
YYDLDKKKIKILFAQGKAAMITEGTWNIKFMREDIPANFNWDIAYIPRGPHWKENVMHAWADGLAIAANSKHPEEAWEFI
KFLIKERAAKDYYPGKVPFYKGEAYSPEWDEWTTFGKLPEHKTLILDYGENAKHFYTKYWKFWRGYGSAEGTGLSDLIDS
LLNGNITLDYFFTRADKQINRMLKKAYK
>Mature_428_residues
MRKGLLLALVLVVLAVAVLGEVTLQYWFWDPNFRDKEQEMIERFEATHPGIKIELTALPPSSYWTKLAAMAAAKSLPDVM
AMHPNSVEDLADQGALMDLTGLILRDFNKEDYFWSVLESSFNIRGKYYGVPFAWVGSVLYYNKDLFDKYGVPYPTEDWTW
EDFLERAKALTIDEDGDGKIDIWGYAFFSRYAVFDGWILQNDGDYLDRENMRWAPNQNAKDTIKFLADLVNVYKVSPKPK
YYDLDKKKIKILFAQGKAAMITEGTWNIKFMREDIPANFNWDIAYIPRGPHWKENVMHAWADGLAIAANSKHPEEAWEFI
KFLIKERAAKDYYPGKVPFYKGEAYSPEWDEWTTFGKLPEHKTLILDYGENAKHFYTKYWKFWRGYGSAEGTGLSDLIDS
LLNGNITLDYFFTRADKQINRMLKKAYK

Specific function: Probably part of an ABC transporter complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 49805; Mature: 49805

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: PS01037 SBP_BACTERIAL_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKGLLLALVLVVLAVAVLGEVTLQYWFWDPNFRDKEQEMIERFEATHPGIKIELTALPP
CCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCC
SSYWTKLAAMAAAKSLPDVMAMHPNSVEDLADQGALMDLTGLILRDFNKEDYFWSVLESS
HHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCC
FNIRGKYYGVPFAWVGSVLYYNKDLFDKYGVPYPTEDWTWEDFLERAKALTIDEDGDGKI
CCCCEEEECCCHHHHHHHHHHCHHHHHHCCCCCCCCCCCHHHHHHHHHEEEEECCCCCEE
DIWGYAFFSRYAVFDGWILQNDGDYLDRENMRWAPNQNAKDTIKFLADLVNVYKVSPKPK
EEEEEHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
YYDLDKKKIKILFAQGKAAMITEGTWNIKFMREDIPANFNWDIAYIPRGPHWKENVMHAW
EECCCCCEEEEEEECCCEEEEECCCEEEEEEECCCCCCCCCEEEECCCCCCHHHHHHHHH
ADGLAIAANSKHPEEAWEFIKFLIKERAAKDYYPGKVPFYKGEAYSPEWDEWTTFGKLPE
HCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCC
HKTLILDYGENAKHFYTKYWKFWRGYGSAEGTGLSDLIDSLLNGNITLDYFFTRADKQIN
CCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEEEEEHHHHHHH
RMLKKAYK
HHHHHHCC
>Mature Secondary Structure
MRKGLLLALVLVVLAVAVLGEVTLQYWFWDPNFRDKEQEMIERFEATHPGIKIELTALPP
CCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCC
SSYWTKLAAMAAAKSLPDVMAMHPNSVEDLADQGALMDLTGLILRDFNKEDYFWSVLESS
HHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCC
FNIRGKYYGVPFAWVGSVLYYNKDLFDKYGVPYPTEDWTWEDFLERAKALTIDEDGDGKI
CCCCEEEECCCHHHHHHHHHHCHHHHHHCCCCCCCCCCCHHHHHHHHHEEEEECCCCCEE
DIWGYAFFSRYAVFDGWILQNDGDYLDRENMRWAPNQNAKDTIKFLADLVNVYKVSPKPK
EEEEEHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
YYDLDKKKIKILFAQGKAAMITEGTWNIKFMREDIPANFNWDIAYIPRGPHWKENVMHAW
EECCCCCEEEEEEECCCEEEEECCCEEEEEEECCCCCCCCCEEEECCCCCCHHHHHHHHH
ADGLAIAANSKHPEEAWEFIKFLIKERAAKDYYPGKVPFYKGEAYSPEWDEWTTFGKLPE
HCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCC
HKTLILDYGENAKHFYTKYWKFWRGYGSAEGTGLSDLIDSLLNGNITLDYFFTRADKQIN
CCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEEEEEHHHHHHH
RMLKKAYK
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA