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The map label for this gene is 239617372

Identifier: 239617372

GI number: 239617372

Start: 1036705

End: 1037577

Strand: Reverse

Name: 239617372

Synonym: Kole_0982

Alternate gene names: NA

Gene position: 1037577-1036705 (Counterclockwise)

Preceding gene: 239617373

Following gene: 239617371

Centisome position: 45.07

GC content: 40.89

Gene sequence:

>873_bases
ATGATCAAAGGGATAGGTATAAATGTGGACACTAAAAGGATTAATGGATCAATCGCGAGGTTTGAAAATGAACTGGCATT
TTTTCAGTCCGTAGGTTTCGATTATGTTGAACTTCCACCTGCTGGCCTCGATGTAATTTACTGGGGTAAGATACGAAGCA
AACAGGTGGAACGAATTAAAAAGATACTATCCAGATTCAAGTTTCGATACACCGTTCACACTCCTGATCCAGTGAATTTG
AAGGACAAAATGGATGTATCACATCGAGAGGTCATGGAAGCGACTATCGAATTTGCACATGAAGTAGGTGCCGAAGTTAT
CGTTTATCATCTTGGAGAATTCTATCCCGATTCGGAAATCACCGAAAAAGAACAGGAATCCGCCGAGATTGAAGATCTCA
GACAACTCGCCGATATTGCACACAAGTACGGAATACTGATAGGTGCAGAGAATCTTACACAAACCATGTCAGATGTAAAT
CGGTTTATAGAGCTGGTTGATCATCCAGCTCTGCGGGTCGTTATGGATATTGGGCATCTTTTCCTGGCATGTAATTATTT
CAAAGTGGATTTTCTCGAACAAATCGAGATCGGTCTGAAATACGCTGTTGAACTCCATGTTCATGATAATTTCGGCAAGT
TGCCCTCTGTTCATTTACGAAACATTTCTAACAATGAATCCTTCAGTTTTACATACGGAATAGGTGACCTTCACCTACCA
CCCGGCGAAGGAGCTATTCCCTTTGATGAGGTATTCTCACTGATAAAAGCTTCACAATTTGATGGAGTGGTTACAGTAGA
AATGAACAGCAAAGATCGTTTTGAAGATGAGTATGCGAAAACTCTCAAATTCCTTCGGGAAAAGCTGATGTAG

Upstream 100 bases:

>100_bases
TTATCACCTTTTCGATGCGGAAACAGGGGAATCCATTTTCTTTAAGTCCTGAGGCTATATAAAAAACAACCACAAACGTT
TTTGGAGGACTGATTTTGAG

Downstream 100 bases:

>100_bases
CATTCGGAAAAGAATGGAGGAATCATCGTGAAAATTTCTTTTGTTGGGCACGTATCAAAGGATATCAATGTTGTTCTGGG
TAAGAAAAGTATCGTTCCTG

Product: Xylose isomerase domain protein TIM barrel

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MIKGIGINVDTKRINGSIARFENELAFFQSVGFDYVELPPAGLDVIYWGKIRSKQVERIKKILSRFKFRYTVHTPDPVNL
KDKMDVSHREVMEATIEFAHEVGAEVIVYHLGEFYPDSEITEKEQESAEIEDLRQLADIAHKYGILIGAENLTQTMSDVN
RFIELVDHPALRVVMDIGHLFLACNYFKVDFLEQIEIGLKYAVELHVHDNFGKLPSVHLRNISNNESFSFTYGIGDLHLP
PGEGAIPFDEVFSLIKASQFDGVVTVEMNSKDRFEDEYAKTLKFLREKLM

Sequences:

>Translated_290_residues
MIKGIGINVDTKRINGSIARFENELAFFQSVGFDYVELPPAGLDVIYWGKIRSKQVERIKKILSRFKFRYTVHTPDPVNL
KDKMDVSHREVMEATIEFAHEVGAEVIVYHLGEFYPDSEITEKEQESAEIEDLRQLADIAHKYGILIGAENLTQTMSDVN
RFIELVDHPALRVVMDIGHLFLACNYFKVDFLEQIEIGLKYAVELHVHDNFGKLPSVHLRNISNNESFSFTYGIGDLHLP
PGEGAIPFDEVFSLIKASQFDGVVTVEMNSKDRFEDEYAKTLKFLREKLM
>Mature_290_residues
MIKGIGINVDTKRINGSIARFENELAFFQSVGFDYVELPPAGLDVIYWGKIRSKQVERIKKILSRFKFRYTVHTPDPVNL
KDKMDVSHREVMEATIEFAHEVGAEVIVYHLGEFYPDSEITEKEQESAEIEDLRQLADIAHKYGILIGAENLTQTMSDVN
RFIELVDHPALRVVMDIGHLFLACNYFKVDFLEQIEIGLKYAVELHVHDNFGKLPSVHLRNISNNESFSFTYGIGDLHLP
PGEGAIPFDEVFSLIKASQFDGVVTVEMNSKDRFEDEYAKTLKFLREKLM

Specific function: Unknown

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ1614 and MJ0008 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2 [H]

EC number: NA

Molecular weight: Translated: 33220; Mature: 33220

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKGIGINVDTKRINGSIARFENELAFFQSVGFDYVELPPAGLDVIYWGKIRSKQVERIK
CCCEEECCCCHHHHCCHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEECCCCHHHHHHHH
KILSRFKFRYTVHTPDPVNLKDKMDVSHREVMEATIEFAHEVGAEVIVYHLGEFYPDSEI
HHHHHHEEEEEEECCCCCCCHHHCCCHHHHHHHHHHHHHHHHCHHEEEHHHHHHCCCCCC
TEKEQESAEIEDLRQLADIAHKYGILIGAENLTQTMSDVNRFIELVDHPALRVVMDIGHL
CHHHHHHHHHHHHHHHHHHHHHHCEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
FLACNYFKVDFLEQIEIGLKYAVELHVHDNFGKLPSVHLRNISNNESFSFTYGIGDLHLP
HHHHCHHHHHHHHHHHHCEEEEEEEEEECCCCCCCCCEEECCCCCCCEEEEECCCCEECC
PGEGAIPFDEVFSLIKASQFDGVVTVEMNSKDRFEDEYAKTLKFLREKLM
CCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIKGIGINVDTKRINGSIARFENELAFFQSVGFDYVELPPAGLDVIYWGKIRSKQVERIK
CCCEEECCCCHHHHCCHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEECCCCHHHHHHHH
KILSRFKFRYTVHTPDPVNLKDKMDVSHREVMEATIEFAHEVGAEVIVYHLGEFYPDSEI
HHHHHHEEEEEEECCCCCCCHHHCCCHHHHHHHHHHHHHHHHCHHEEEHHHHHHCCCCCC
TEKEQESAEIEDLRQLADIAHKYGILIGAENLTQTMSDVNRFIELVDHPALRVVMDIGHL
CHHHHHHHHHHHHHHHHHHHHHHCEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
FLACNYFKVDFLEQIEIGLKYAVELHVHDNFGKLPSVHLRNISNNESFSFTYGIGDLHLP
HHHHCHHHHHHHHHHHHCEEEEEEEEEECCCCCCCCCEEECCCCCCCEEEEECCCCEECC
PGEGAIPFDEVFSLIKASQFDGVVTVEMNSKDRFEDEYAKTLKFLREKLM
CCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]