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The map label for this gene is kamA [H]

Identifier: 239617353

GI number: 239617353

Start: 1018499

End: 1019779

Strand: Reverse

Name: kamA [H]

Synonym: Kole_0963

Alternate gene names: 239617353

Gene position: 1019779-1018499 (Counterclockwise)

Preceding gene: 239617354

Following gene: 239617352

Centisome position: 44.3

GC content: 44.18

Gene sequence:

>1281_bases
ATGAGAGACTATAAGAAAATACCGCTTTGGAAGGATGTCACAGAAAAGGAGTGGAACGACTGGCGATGGCAGGTACGGAA
TAGGATCACCACAGTTGAACAGTTAAAACAGGTGATCAATATAACCAAGGAAGAAGAAGAAGGTATCAAAAACTGCCTCA
AAACCCTTAGAATGGCTATTACTCCTTACTACGCCACGTTGATGGATCCTGACAATCCAAAATGTCCTATCAGAAGGCAA
GCTGTTCCTACTGAAAAGGAACTCATTGTTGACAGATGGGACATGCTTGATCCATTGCACGAAGATGAGGATTCTCCGGT
TCCTGGCCTAACTCACAGATATCCTGACCGTGTTCTGCTGTTGATAACCGATCAGTGTTCTATGTATTGCCGTCATTGTA
CCCGAAGGAGATTTGCCGGCCAGCTGGACAAACCGAGAACCAAAAGGGAAATCGATAAAGCCATTGAGTACATTCGAGAA
ACTCCGCAGGTGAGGGACGTTTTGCTTTCCGGTGGGGACGCTCTGCTCGTTGATGATTCTGTTTTAGAATACATATTGAA
GGAACTCAGGAAAATACCACATGTGGAGATAATAAGGATTGGAAGCAGAACGCCTGTTGTTCTTCCACAAAGAATAACAC
CAGAACTGGTGAAGATGCTTAAAAAATATCATCCTATTTGGTTGAACACTCATTTTAATCATCCAAAAGAAATTACACCT
GAATCCGCAAAAGCCTGTGAAACTCTCGCAAATGCAGGTATACCACTTGGTAACCAGAGCGTTTTGCTTAGAGGTGTCAA
TGACAGTCCTTACATAATGATGGAACTCGTTCACCAGCTTGTGAAGATAAGGGTCAGGCCTTATTATATTTACCAGTGTG
ATCTTTCCCAGGGAATAGGTCATTTCCGAACTTCTATCAGAAAAGGTATAGCGATCATGGAATCGTTGATAGGGCATACA
TCGGGATTCTGTGTTCCTACCTTTGTTGTTGATGCTCCCGGTGGCGGCGGGAAGATCAGGGTGATGCCACAATACGTTGT
TTCACAGTCGGATAGAACGGTGGTTCTCAGAAACTATGAAGGAGTAATAACCACCTATCATGAACCGGAAGAAACGGATA
CCGACGTTGATGATTCTGAATACAGGAAGAAATACGAACTCAAAGGAGTTGCAGCCCTTCTTGACGGTAAGCAGCTCAAC
ATAGAACCGGCTAATCTTGATAGAAAAGAGCGGATCCTCCGCTGGAAAGAAGGGAGGGGAAAGGGTGGCCAGAAAGTATG
A

Upstream 100 bases:

>100_bases
AGCACCGAAAATAAGAGAATTGTTTGAAAGCGTATATGCTTAGAAGAGGGGTTGTTGCAGGGATACACTTATATAAAAAA
CATAAAGTCGGAGGGGGCGT

Downstream 100 bases:

>100_bases
TGACATAACAGTTGGTAAAGTTTTTGAGAAGAAAAGAAAGGTCACCGACGAGATGATTAGAGAATTCGCGAAGATTACCG
GGGATGATAATCCGGTTCAC

Product: lysine 2,3-aminomutase YodO family protein

Products: NA

Alternate protein names: LAM; KAM [H]

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MRDYKKIPLWKDVTEKEWNDWRWQVRNRITTVEQLKQVINITKEEEEGIKNCLKTLRMAITPYYATLMDPDNPKCPIRRQ
AVPTEKELIVDRWDMLDPLHEDEDSPVPGLTHRYPDRVLLLITDQCSMYCRHCTRRRFAGQLDKPRTKREIDKAIEYIRE
TPQVRDVLLSGGDALLVDDSVLEYILKELRKIPHVEIIRIGSRTPVVLPQRITPELVKMLKKYHPIWLNTHFNHPKEITP
ESAKACETLANAGIPLGNQSVLLRGVNDSPYIMMELVHQLVKIRVRPYYIYQCDLSQGIGHFRTSIRKGIAIMESLIGHT
SGFCVPTFVVDAPGGGGKIRVMPQYVVSQSDRTVVLRNYEGVITTYHEPEETDTDVDDSEYRKKYELKGVAALLDGKQLN
IEPANLDRKERILRWKEGRGKGGQKV

Sequences:

>Translated_426_residues
MRDYKKIPLWKDVTEKEWNDWRWQVRNRITTVEQLKQVINITKEEEEGIKNCLKTLRMAITPYYATLMDPDNPKCPIRRQ
AVPTEKELIVDRWDMLDPLHEDEDSPVPGLTHRYPDRVLLLITDQCSMYCRHCTRRRFAGQLDKPRTKREIDKAIEYIRE
TPQVRDVLLSGGDALLVDDSVLEYILKELRKIPHVEIIRIGSRTPVVLPQRITPELVKMLKKYHPIWLNTHFNHPKEITP
ESAKACETLANAGIPLGNQSVLLRGVNDSPYIMMELVHQLVKIRVRPYYIYQCDLSQGIGHFRTSIRKGIAIMESLIGHT
SGFCVPTFVVDAPGGGGKIRVMPQYVVSQSDRTVVLRNYEGVITTYHEPEETDTDVDDSEYRKKYELKGVAALLDGKQLN
IEPANLDRKERILRWKEGRGKGGQKV
>Mature_426_residues
MRDYKKIPLWKDVTEKEWNDWRWQVRNRITTVEQLKQVINITKEEEEGIKNCLKTLRMAITPYYATLMDPDNPKCPIRRQ
AVPTEKELIVDRWDMLDPLHEDEDSPVPGLTHRYPDRVLLLITDQCSMYCRHCTRRRFAGQLDKPRTKREIDKAIEYIRE
TPQVRDVLLSGGDALLVDDSVLEYILKELRKIPHVEIIRIGSRTPVVLPQRITPELVKMLKKYHPIWLNTHFNHPKEITP
ESAKACETLANAGIPLGNQSVLLRGVNDSPYIMMELVHQLVKIRVRPYYIYQCDLSQGIGHFRTSIRKGIAIMESLIGHT
SGFCVPTFVVDAPGGGGKIRVMPQYVVSQSDRTVVLRNYEGVITTYHEPEETDTDVDDSEYRKKYELKGVAALLDGKQLN
IEPANLDRKERILRWKEGRGKGGQKV

Specific function: Catalyzes the interconversion of L-alpha-lysine and L- beta-lysine [H]

COG id: COG1509

COG function: function code E; Lysine 2,3-aminomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the KamA family [H]

Homologues:

Organism=Escherichia coli, GI1790589, Length=321, Percent_Identity=34.2679127725857, Blast_Score=190, Evalue=2e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003739
- InterPro:   IPR022459
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: =5.4.3.2 [H]

Molecular weight: Translated: 49274; Mature: 49274

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDYKKIPLWKDVTEKEWNDWRWQVRNRITTVEQLKQVINITKEEEEGIKNCLKTLRMAI
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
TPYYATLMDPDNPKCPIRRQAVPTEKELIVDRWDMLDPLHEDEDSPVPGLTHRYPDRVLL
HHHHHEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEE
LITDQCSMYCRHCTRRRFAGQLDKPRTKREIDKAIEYIRETPQVRDVLLSGGDALLVDDS
EEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHCCCCEEEECHH
VLEYILKELRKIPHVEIIRIGSRTPVVLPQRITPELVKMLKKYHPIWLNTHFNHPKEITP
HHHHHHHHHHHCCCEEEEEECCCCCEEECCCCCHHHHHHHHHCCCEEEECCCCCCCCCCC
ESAKACETLANAGIPLGNQSVLLRGVNDSPYIMMELVHQLVKIRVRPYYIYQCDLSQGIG
HHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHEECCEEEEEEECHHHHHH
HFRTSIRKGIAIMESLIGHTSGFCVPTFVVDAPGGGGKIRVMPQYVVSQSDRTVVLRNYE
HHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEHHHHHCCCCCEEEEECCC
GVITTYHEPEETDTDVDDSEYRKKYELKGVAALLDGKQLNIEPANLDRKERILRWKEGRG
CEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHCCCC
KGGQKV
CCCCCC
>Mature Secondary Structure
MRDYKKIPLWKDVTEKEWNDWRWQVRNRITTVEQLKQVINITKEEEEGIKNCLKTLRMAI
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
TPYYATLMDPDNPKCPIRRQAVPTEKELIVDRWDMLDPLHEDEDSPVPGLTHRYPDRVLL
HHHHHEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEE
LITDQCSMYCRHCTRRRFAGQLDKPRTKREIDKAIEYIRETPQVRDVLLSGGDALLVDDS
EEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHCCCCEEEECHH
VLEYILKELRKIPHVEIIRIGSRTPVVLPQRITPELVKMLKKYHPIWLNTHFNHPKEITP
HHHHHHHHHHHCCCEEEEEECCCCCEEECCCCCHHHHHHHHHCCCEEEECCCCCCCCCCC
ESAKACETLANAGIPLGNQSVLLRGVNDSPYIMMELVHQLVKIRVRPYYIYQCDLSQGIG
HHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHEECCEEEEEEECHHHHHH
HFRTSIRKGIAIMESLIGHTSGFCVPTFVVDAPGGGGKIRVMPQYVVSQSDRTVVLRNYE
HHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEHHHHHCCCCCEEEEECCC
GVITTYHEPEETDTDVDDSEYRKKYELKGVAALLDGKQLNIEPANLDRKERILRWKEGRG
CEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHCCCC
KGGQKV
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10629195 [H]