| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239617312
Identifier: 239617312
GI number: 239617312
Start: 974291
End: 974737
Strand: Reverse
Name: 239617312
Synonym: Kole_0921
Alternate gene names: NA
Gene position: 974737-974291 (Counterclockwise)
Preceding gene: 239617314
Following gene: 239617311
Centisome position: 42.34
GC content: 42.28
Gene sequence:
>447_bases ATGTTTACCAGAAGAAGGGGGTTTACTTTCATAGAGCTGCTTATAGTCCTTGCTGTTATAGCGGCGCTTCTTGCCAGTAT TACACCTGTTGCCATGAATGCGATAAGAAAAGCCAAGGCGATTCAGGTGGCATTTAATCTCAAAGTTCTTGCCGGGGGTA TTCAGAACAAACTATTGTTAGATCGCGAGCTGCCTTCCAATATTTCTGAAATTGGTAGGGACATAGATACACAAAATTAC GGAATAGCTTATACTTCTTCTGGCGGTCATTATGTCATTGTGGTTTTTACAACCGAAGAGGTGAAATTTGACACCGTTCA CGAGATACTTCCGGCTTCGAGCGATTCCACCGCGATAATTCCTGCTGGTGCGGATTATCTGGCCGGAGGACTTCAGAATG CGAACAATGCTACTGTTCTTTATCGTATAGAATTTGATATTTATTAA
Upstream 100 bases:
>100_bases CCATCAATCGATTTCTCATGTAACATCATTGCTCCTTGCTTCTTTACAAAACGATTGTATAATTTAGAGTACCTCAGAAC ACTATTGCGGGAGGGATTAT
Downstream 100 bases:
>100_bases TCTCTTTTGCAAAAATCAGAGCAGCCTCTTGTGAGGCTGCTCTGACGCTTCGTGATGGGGAAATCTTTCGAACAGGGGTG GGGTTAGCACGTTGTATTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MFTRRRGFTFIELLIVLAVIAALLASITPVAMNAIRKAKAIQVAFNLKVLAGGIQNKLLLDRELPSNISEIGRDIDTQNY GIAYTSSGGHYVIVVFTTEEVKFDTVHEILPASSDSTAIIPAGADYLAGGLQNANNATVLYRIEFDIY
Sequences:
>Translated_148_residues MFTRRRGFTFIELLIVLAVIAALLASITPVAMNAIRKAKAIQVAFNLKVLAGGIQNKLLLDRELPSNISEIGRDIDTQNY GIAYTSSGGHYVIVVFTTEEVKFDTVHEILPASSDSTAIIPAGADYLAGGLQNANNATVLYRIEFDIY >Mature_148_residues MFTRRRGFTFIELLIVLAVIAALLASITPVAMNAIRKAKAIQVAFNLKVLAGGIQNKLLLDRELPSNISEIGRDIDTQNY GIAYTSSGGHYVIVVFTTEEVKFDTVHEILPASSDSTAIIPAGADYLAGGLQNANNATVLYRIEFDIY
Specific function: Unknown
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16091; Mature: 16091
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTRRRGFTFIELLIVLAVIAALLASITPVAMNAIRKAKAIQVAFNLKVLAGGIQNKLLL CCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEEEEEEEEEECCCCCCEEE DRELPSNISEIGRDIDTQNYGIAYTSSGGHYVIVVFTTEEVKFDTVHEILPASSDSTAII CCCCCCCHHHHCCCCCCCCCCEEEECCCCEEEEEEEECCCCCHHHHHHHHCCCCCCCEEE PAGADYLAGGLQNANNATVLYRIEFDIY ECCHHHHHCCCCCCCCCEEEEEEEEEEC >Mature Secondary Structure MFTRRRGFTFIELLIVLAVIAALLASITPVAMNAIRKAKAIQVAFNLKVLAGGIQNKLLL CCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEEEEEEEEEECCCCCCEEE DRELPSNISEIGRDIDTQNYGIAYTSSGGHYVIVVFTTEEVKFDTVHEILPASSDSTAII CCCCCCCHHHHCCCCCCCCCCEEEECCCCEEEEEEEECCCCCHHHHHHHHCCCCCCCEEE PAGADYLAGGLQNANNATVLYRIEFDIY ECCHHHHHCCCCCCCCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA