| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239617147
Identifier: 239617147
GI number: 239617147
Start: 803583
End: 804584
Strand: Direct
Name: 239617147
Synonym: Kole_0751
Alternate gene names: NA
Gene position: 803583-804584 (Clockwise)
Preceding gene: 239617146
Following gene: 239617158
Centisome position: 34.91
GC content: 40.92
Gene sequence:
>1002_bases GTGAGCAAAACTCTTCGGAACTTGTTGATCGTAGTCTTGATAACTATTATCACACTTGTTATAATCTCGCATTTTTCAGA TTTTAAAACCGCGTTTGCCTATATTATCCAGGCTTCACCATTCTGGGTATTCATCACCTTTGTCGTTGCAGCCACAGCCT GGGTACTGGAAGCATTGACGGTCAAGATCTTCTCCAAACTCTCCGGCCTTCATGCAAAATTTATTTACCTTCTGAAACTT ACAATAATAGGAGCCTTTTTCTCTGCAATAACCCCTTTCTACACCGGTGGTCAGCCAGCTCAAATAGCCTTCATGGCAAA AAAAAGGCTAAGCGCCGGCAAAGCTTCCGCTATGTTGATGGCGCGTTTTGTGGCTTATCAGATCGTCATTACGGTCTTCG GCGTAGTTGGGGTTTTCTCAGCTTATTCTTTTGTCTCTAAGGAAATATCTAACTTAGCGCTTCTTGCTATATTTGGGTTC ATCCTGAACTCAGGTGTCTTGTTCTTCATAATAATGTTTTCAATCAGCGCCCGTACTACTGAGAAAATTGTGAGATTCTT TATTTTTCTGTTGGCTAGATTCAGGGTTATAAAAAATCCTGAAGAAAAAATCGAAAAGATACTTTTTGAGGTAAGTCGTT TTAACAAAAGCATGAAAAAGTCTTTTGAAACCCCGAAAACTTTCCTTCTATCGTTAACTCTGTCTTTTTTACAAATGATG GCGGTAATCTCTATTCCATACTTTGCATCACGCTCCCTTGGTATAACCGTCGACTACTTCCAGTTGATCTCCGTTCAGTT GGTTCTATTTTTGATAGCTTCAATGGTACCAACTCCGGGAGCAAGTGGTGCCTCTGAAGGAGGCTTTATGCTTTTTTTCA CCCCGCTCTTTGGAGCTAAAACCGCTGCAGTTATGCTCTTATGGCGTTTCTTTACCTATTACATGAACATACTGTTCGGA GGGTTCCTGACTGTCATTGAAACACACAGCCATAAATCCTAA
Upstream 100 bases:
>100_bases AACTCGGTAAAAATGGTAGAAAAACCGCAGAAGAACGCAGTCTAGAAAAAGTTGGTGCAAAGTTGAAAAAAATATACGAA GAACTTCTTGGAGGTGGACT
Downstream 100 bases:
>100_bases TCTCTTGAGTTCAACACAGTTTCATATAGAGCTATTGTCTTTTTTACATGCTTCTCCATGGTAAAGGATCCCGCAATTTC GATGGAAGCTACAGACATGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MSKTLRNLLIVVLITIITLVIISHFSDFKTAFAYIIQASPFWVFITFVVAATAWVLEALTVKIFSKLSGLHAKFIYLLKL TIIGAFFSAITPFYTGGQPAQIAFMAKKRLSAGKASAMLMARFVAYQIVITVFGVVGVFSAYSFVSKEISNLALLAIFGF ILNSGVLFFIIMFSISARTTEKIVRFFIFLLARFRVIKNPEEKIEKILFEVSRFNKSMKKSFETPKTFLLSLTLSFLQMM AVISIPYFASRSLGITVDYFQLISVQLVLFLIASMVPTPGASGASEGGFMLFFTPLFGAKTAAVMLLWRFFTYYMNILFG GFLTVIETHSHKS
Sequences:
>Translated_333_residues MSKTLRNLLIVVLITIITLVIISHFSDFKTAFAYIIQASPFWVFITFVVAATAWVLEALTVKIFSKLSGLHAKFIYLLKL TIIGAFFSAITPFYTGGQPAQIAFMAKKRLSAGKASAMLMARFVAYQIVITVFGVVGVFSAYSFVSKEISNLALLAIFGF ILNSGVLFFIIMFSISARTTEKIVRFFIFLLARFRVIKNPEEKIEKILFEVSRFNKSMKKSFETPKTFLLSLTLSFLQMM AVISIPYFASRSLGITVDYFQLISVQLVLFLIASMVPTPGASGASEGGFMLFFTPLFGAKTAAVMLLWRFFTYYMNILFG GFLTVIETHSHKS >Mature_332_residues SKTLRNLLIVVLITIITLVIISHFSDFKTAFAYIIQASPFWVFITFVVAATAWVLEALTVKIFSKLSGLHAKFIYLLKLT IIGAFFSAITPFYTGGQPAQIAFMAKKRLSAGKASAMLMARFVAYQIVITVFGVVGVFSAYSFVSKEISNLALLAIFGFI LNSGVLFFIIMFSISARTTEKIVRFFIFLLARFRVIKNPEEKIEKILFEVSRFNKSMKKSFETPKTFLLSLTLSFLQMMA VISIPYFASRSLGITVDYFQLISVQLVLFLIASMVPTPGASGASEGGFMLFFTPLFGAKTAAVMLLWRFFTYYMNILFGG FLTVIETHSHKS
Specific function: Unknown
COG id: COG0392
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0104 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022791 - InterPro: IPR005242 [H]
Pfam domain/function: PF03706 UPF0104 [H]
EC number: NA
Molecular weight: Translated: 37254; Mature: 37123
Theoretical pI: Translated: 10.75; Mature: 10.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKTLRNLLIVVLITIITLVIISHFSDFKTAFAYIIQASPFWVFITFVVAATAWVLEALT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH VKIFSKLSGLHAKFIYLLKLTIIGAFFSAITPFYTGGQPAQIAFMAKKRLSAGKASAMLM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHH ARFVAYQIVITVFGVVGVFSAYSFVSKEISNLALLAIFGFILNSGVLFFIIMFSISARTT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH EKIVRFFIFLLARFRVIKNPEEKIEKILFEVSRFNKSMKKSFETPKTFLLSLTLSFLQMM HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH AVISIPYFASRSLGITVDYFQLISVQLVLFLIASMVPTPGASGASEGGFMLFFTPLFGAK HHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCHHCHH TAAVMLLWRFFTYYMNILFGGFLTVIETHSHKS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SKTLRNLLIVVLITIITLVIISHFSDFKTAFAYIIQASPFWVFITFVVAATAWVLEALT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH VKIFSKLSGLHAKFIYLLKLTIIGAFFSAITPFYTGGQPAQIAFMAKKRLSAGKASAMLM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHH ARFVAYQIVITVFGVVGVFSAYSFVSKEISNLALLAIFGFILNSGVLFFIIMFSISARTT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH EKIVRFFIFLLARFRVIKNPEEKIEKILFEVSRFNKSMKKSFETPKTFLLSLTLSFLQMM HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH AVISIPYFASRSLGITVDYFQLISVQLVLFLIASMVPTPGASGASEGGFMLFFTPLFGAK HHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCHHCHH TAAVMLLWRFFTYYMNILFGGFLTVIETHSHKS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]