| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239617136
Identifier: 239617136
GI number: 239617136
Start: 791167
End: 791856
Strand: Direct
Name: 239617136
Synonym: Kole_0740
Alternate gene names: NA
Gene position: 791167-791856 (Clockwise)
Preceding gene: 239617133
Following gene: 239617137
Centisome position: 34.37
GC content: 44.06
Gene sequence:
>690_bases ATGGTAAGTTGTAGGTTGTGGGTTGTGCATGAAAAGCTGTCGCTAACCGAAAGAACGAGAAATGACGCCGATATTGTAGA TCTCACTTTACCGGACAAATTCACTGTGGGGGATGTCCCTCTCAGAGAAGTGATTACGAAAAGAAGGAGCAGAAGGAAGT TTGCAAAAAAGCCCCTTACGCTTGAAGAGCTTTCGTTTCTTCTCTGGAGTACCCAGGGAGTAAAAGAAGTGTTCGATAAC AAAGTTACACTCAGAACAGTGCCTTCAGCTGGCGCCAGACACCCCTTTGAAACATACCTCGCAATTCATGATGTTGAAGG TATAAAGCCAGGACTTTACAGATATCTGGCACTCGAACACAAGCTTTTATTCTTAAAAGAGGTAGATGAACTTCCTCGAA AATTAATAGAAGCTTCCTTGGGACAGCGTTTTGTAGGAGAATGTGCGGTTACCTTTATTTGGACGGTCATACCTTACAGA ACCGAATGGCGGTATGCGCAGGCTTCTCATAAGGTAATAGCAATAGATATCGGGCATGTGTGTCAGAACCTCTATCTTGC AGCTGAAGCCATAGGGGCTGGGACTTGTGCTGTTGCAGCGTATGATCAGAGTAAAATGGATAGTCTGATAGGAGTGGATG GTGAGGAGGAATTCGTTATTTACATGGCTCCAGTAGGAAAATTGGAATAA
Upstream 100 bases:
>100_bases ATATAACAAAACGTTATAAATTACGAAGGATTTGTACACTCTTTCTAAAATGAGATTAGAGAACCGAGATTTGAGAATCG AGATCCGGAAAACAAGAAAC
Downstream 100 bases:
>100_bases AATGATAGTGTTTTTTGGATTTAGGCATCAAATATGGTAGAATAACAAAAATTTCTAGCGGAGGTTCTATGTCAGAAGAA ATGAAGGTACGTAAAGTGTT
Product: nitroreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MVSCRLWVVHEKLSLTERTRNDADIVDLTLPDKFTVGDVPLREVITKRRSRRKFAKKPLTLEELSFLLWSTQGVKEVFDN KVTLRTVPSAGARHPFETYLAIHDVEGIKPGLYRYLALEHKLLFLKEVDELPRKLIEASLGQRFVGECAVTFIWTVIPYR TEWRYAQASHKVIAIDIGHVCQNLYLAAEAIGAGTCAVAAYDQSKMDSLIGVDGEEEFVIYMAPVGKLE
Sequences:
>Translated_229_residues MVSCRLWVVHEKLSLTERTRNDADIVDLTLPDKFTVGDVPLREVITKRRSRRKFAKKPLTLEELSFLLWSTQGVKEVFDN KVTLRTVPSAGARHPFETYLAIHDVEGIKPGLYRYLALEHKLLFLKEVDELPRKLIEASLGQRFVGECAVTFIWTVIPYR TEWRYAQASHKVIAIDIGHVCQNLYLAAEAIGAGTCAVAAYDQSKMDSLIGVDGEEEFVIYMAPVGKLE >Mature_229_residues MVSCRLWVVHEKLSLTERTRNDADIVDLTLPDKFTVGDVPLREVITKRRSRRKFAKKPLTLEELSFLLWSTQGVKEVFDN KVTLRTVPSAGARHPFETYLAIHDVEGIKPGLYRYLALEHKLLFLKEVDELPRKLIEASLGQRFVGECAVTFIWTVIPYR TEWRYAQASHKVIAIDIGHVCQNLYLAAEAIGAGTCAVAAYDQSKMDSLIGVDGEEEFVIYMAPVGKLE
Specific function: Unknown
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitroreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000415 - InterPro: IPR020051 [H]
Pfam domain/function: PF00881 Nitroreductase [H]
EC number: NA
Molecular weight: Translated: 25951; Mature: 25951
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSCRLWVVHEKLSLTERTRNDADIVDLTLPDKFTVGDVPLREVITKRRSRRKFAKKPLT CCEEEEEEEECHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC LEELSFLLWSTQGVKEVFDNKVTLRTVPSAGARHPFETYLAIHDVEGIKPGLYRYLALEH HHHHHHHHHCCCCHHHHHCCCEEEEECCCCCCCCCHHHHEEEECCCCCCHHHHHHHHHHH KLLFLKEVDELPRKLIEASLGQRFVGECAVTFIWTVIPYRTEWRYAQASHKVIAIDIGHV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHH CQNLYLAAEAIGAGTCAVAAYDQSKMDSLIGVDGEEEFVIYMAPVGKLE HHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCCCCCEEEEECCCCCCC >Mature Secondary Structure MVSCRLWVVHEKLSLTERTRNDADIVDLTLPDKFTVGDVPLREVITKRRSRRKFAKKPLT CCEEEEEEEECHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC LEELSFLLWSTQGVKEVFDNKVTLRTVPSAGARHPFETYLAIHDVEGIKPGLYRYLALEH HHHHHHHHHCCCCHHHHHCCCEEEEECCCCCCCCCHHHHEEEECCCCCCHHHHHHHHHHH KLLFLKEVDELPRKLIEASLGQRFVGECAVTFIWTVIPYRTEWRYAQASHKVIAIDIGHV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHH CQNLYLAAEAIGAGTCAVAAYDQSKMDSLIGVDGEEEFVIYMAPVGKLE HHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]