| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is glmS [H]
Identifier: 239617132
GI number: 239617132
Start: 786073
End: 787074
Strand: Direct
Name: glmS [H]
Synonym: Kole_0736
Alternate gene names: 239617132
Gene position: 786073-787074 (Clockwise)
Preceding gene: 239617131
Following gene: 239617133
Centisome position: 34.15
GC content: 40.12
Gene sequence:
>1002_bases GTGACAACTGTCGAGAAAGAAATACGCGAGCAGATAACCGATCTTCCAAATATACTCAGTTTTATGAAAGATTTTGTCAA AACAGGGAAATTACCGGATTTTCTGTTTGATGCAGACCTGGTCTATTTTGTCGGATGTGGAAGTTCCCATTACAATGGTA TAGCTGCATCTCGTTATTTTATCCAAAAAACAGGAATAGAAGCCAGAGCACTGCCGGGCGGTGAAATCTTCTTTGCAAAA AATCAAAATATAGGCAGTAACACAATGAAGAGAGCAGCTGTGCTTATTTCTAGATCTGGAGAATCAACAGAAGTTCTGCT TGCCGGGAAGGTTTTCAAGCAACTTGGAATACCGACGCTGGGAATAACAACGGTAAATAACAGTTCTCTTGTAAAGATAG TTGATCGTTCTATTGTACTGCCTCTCGATGAAGTTTCCATAGTTATGACGAAGTCGTTTTCCGCTATTCTTCTAGCTTTA CAGTTACTTGTTGACTATTATTCCAATGGGAATTTCGAGTATTACGATGAATTAGTCCGTTTGATACCGGACATAATTGA GAAAAGTTTTGAAATGATTGAGAATGACCAGCTGTGTTCTTACAAACGTTTCATCTTTCTTGGTATAGGTTCCTTTGAGG GGATTGCCAGAGAAGGTGCTTTGAAACTGGAAGAGATGTCTCTGAGCACAACAAAGGCTTTCTCAACCTATGAATTCAGG CACGGACCTAAATCGATGGCAGATGAAGAAACACTCGTCACGATTTTCGGAGATATCACAACAGAAGAAAGAAAACTCGC GGATGAGTTAAGATCTTACGGATCAAAGATAATTTATGTTGGTTCAGGTGAACCTGATATCTATACGGGTGGAGAAATGG GACTATTCCTGTCTCCTATTTTCTCACAGATATTGGGGTTAAAAATTGCTGAAGCAAAGGGCTTGAACGTTGAAGCTCCA AGGAATCTTACAAAGGTTGTACGCTTTGTGCACAACGCGTGA
Upstream 100 bases:
>100_bases GTTTTATCTTTTTGTTCATATATAATCAAACTTACCCATGTTTACTAGTTATATATGATTGTTTTTGGAAAGTACAGGAT GATGAAAGGAGTGAAATACC
Downstream 100 bases:
>100_bases TTGATTAAATTTTCAGATCAATGAAAGTAAGATACTAAAGCCCGGAGGTGAAGTTATGAATCTTACGGTAGGAAAGTTCA GAGGTTATACCAGGATTTCC
Product: Glutamine--fructose-6-phosphate transaminase (isomerizing)
Products: NA
Alternate protein names: D-fructose-6-phosphate amidotransferase; GFAT; Glucosamine-6-phosphate synthase; Hexosephosphate aminotransferase; L-glutamine-D-fructose-6-phosphate amidotransferase [H]
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MTTVEKEIREQITDLPNILSFMKDFVKTGKLPDFLFDADLVYFVGCGSSHYNGIAASRYFIQKTGIEARALPGGEIFFAK NQNIGSNTMKRAAVLISRSGESTEVLLAGKVFKQLGIPTLGITTVNNSSLVKIVDRSIVLPLDEVSIVMTKSFSAILLAL QLLVDYYSNGNFEYYDELVRLIPDIIEKSFEMIENDQLCSYKRFIFLGIGSFEGIAREGALKLEEMSLSTTKAFSTYEFR HGPKSMADEETLVTIFGDITTEERKLADELRSYGSKIIYVGSGEPDIYTGGEMGLFLSPIFSQILGLKIAEAKGLNVEAP RNLTKVVRFVHNA
Sequences:
>Translated_333_residues MTTVEKEIREQITDLPNILSFMKDFVKTGKLPDFLFDADLVYFVGCGSSHYNGIAASRYFIQKTGIEARALPGGEIFFAK NQNIGSNTMKRAAVLISRSGESTEVLLAGKVFKQLGIPTLGITTVNNSSLVKIVDRSIVLPLDEVSIVMTKSFSAILLAL QLLVDYYSNGNFEYYDELVRLIPDIIEKSFEMIENDQLCSYKRFIFLGIGSFEGIAREGALKLEEMSLSTTKAFSTYEFR HGPKSMADEETLVTIFGDITTEERKLADELRSYGSKIIYVGSGEPDIYTGGEMGLFLSPIFSQILGLKIAEAKGLNVEAP RNLTKVVRFVHNA >Mature_332_residues TTVEKEIREQITDLPNILSFMKDFVKTGKLPDFLFDADLVYFVGCGSSHYNGIAASRYFIQKTGIEARALPGGEIFFAKN QNIGSNTMKRAAVLISRSGESTEVLLAGKVFKQLGIPTLGITTVNNSSLVKIVDRSIVLPLDEVSIVMTKSFSAILLALQ LLVDYYSNGNFEYYDELVRLIPDIIEKSFEMIENDQLCSYKRFIFLGIGSFEGIAREGALKLEEMSLSTTKAFSTYEFRH GPKSMADEETLVTIFGDITTEERKLADELRSYGSKIIYVGSGEPDIYTGGEMGLFLSPIFSQILGLKIAEAKGLNVEAPR NLTKVVRFVHNA
Specific function: Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source [H]
COG id: COG2222
COG function: function code M; Predicted phosphosugar isomerases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 SIS domains [H]
Homologues:
Organism=Homo sapiens, GI205277386, Length=360, Percent_Identity=22.5, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI4826742, Length=362, Percent_Identity=23.7569060773481, Blast_Score=69, Evalue=6e-12, Organism=Escherichia coli, GI1790167, Length=363, Percent_Identity=26.7217630853994, Blast_Score=92, Evalue=4e-20, Organism=Caenorhabditis elegans, GI17532899, Length=360, Percent_Identity=24.4444444444444, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17532897, Length=360, Percent_Identity=24.4444444444444, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17539970, Length=313, Percent_Identity=25.2396166134185, Blast_Score=74, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6322745, Length=364, Percent_Identity=23.6263736263736, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000583 - InterPro: IPR017932 - InterPro: IPR005855 - InterPro: IPR001347 [H]
Pfam domain/function: PF00310 GATase_2; PF01380 SIS [H]
EC number: =2.6.1.16 [H]
Molecular weight: Translated: 36949; Mature: 36818
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTVEKEIREQITDLPNILSFMKDFVKTGKLPDFLFDADLVYFVGCGSSHYNGIAASRYF CCCHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHCCCEEEEEECCCCCCCCHHHHHHH IQKTGIEARALPGGEIFFAKNQNIGSNTMKRAAVLISRSGESTEVLLAGKVFKQLGIPTL HHHCCCCEECCCCCEEEEEECCCCCHHHHHHHHHEEECCCCCCEEEEHHHHHHHHCCCEE GITTVNNSSLVKIVDRSIVLPLDEVSIVMTKSFSAILLALQLLVDYYSNGNFEYYDELVR EEEEECCCCEEEEECCEEECCHHHHEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH LIPDIIEKSFEMIENDQLCSYKRFIFLGIGSFEGIAREGALKLEEMSLSTTKAFSTYEFR HHHHHHHHHHHHHCCCCHHCEEEEEEEECCCCCCHHHHCCCCHHHHCCHHHHHHHHHHHC HGPKSMADEETLVTIFGDITTEERKLADELRSYGSKIIYVGSGEPDIYTGGEMGLFLSPI CCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCEEECCCCCHHHHHH FSQILGLKIAEAKGLNVEAPRNLTKVVRFVHNA HHHHHCCEEECCCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure TTVEKEIREQITDLPNILSFMKDFVKTGKLPDFLFDADLVYFVGCGSSHYNGIAASRYF CCHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHCCCEEEEEECCCCCCCCHHHHHHH IQKTGIEARALPGGEIFFAKNQNIGSNTMKRAAVLISRSGESTEVLLAGKVFKQLGIPTL HHHCCCCEECCCCCEEEEEECCCCCHHHHHHHHHEEECCCCCCEEEEHHHHHHHHCCCEE GITTVNNSSLVKIVDRSIVLPLDEVSIVMTKSFSAILLALQLLVDYYSNGNFEYYDELVR EEEEECCCCEEEEECCEEECCHHHHEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH LIPDIIEKSFEMIENDQLCSYKRFIFLGIGSFEGIAREGALKLEEMSLSTTKAFSTYEFR HHHHHHHHHHHHHCCCCHHCEEEEEEEECCCCCCHHHHCCCCHHHHCCHHHHHHHHHHHC HGPKSMADEETLVTIFGDITTEERKLADELRSYGSKIIYVGSGEPDIYTGGEMGLFLSPI CCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCEEECCCCCHHHHHH FSQILGLKIAEAKGLNVEAPRNLTKVVRFVHNA HHHHHCCEEECCCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12089438 [H]