| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239617046
Identifier: 239617046
GI number: 239617046
Start: 690393
End: 691448
Strand: Direct
Name: 239617046
Synonym: Kole_0647
Alternate gene names: NA
Gene position: 690393-691448 (Clockwise)
Preceding gene: 239617045
Following gene: 239617047
Centisome position: 29.99
GC content: 35.32
Gene sequence:
>1056_bases ATGAGTATCGGAAGCAGAATCAAACAAGCTCGGATAAGAAATAATATGAGTCTAAGAAAACTATCAGAAAAAGTCGGTGT TTCTGCAATGGCCATTTCGAAATATGAAAGAGATGAAGATGTACCAAGTTCAAAAGTGCTCATAAGATTATCAAAAGCCC TCAATGTCAAGGTTGAGTATTTTTTCAGACCAGACCTATTTCCAATAGAGTCACTCTCACAAGTATCTTATAGAAAACAT TCCAAATTGGGTAAAAAAATACTGAATGCAATCAAAGAATCTATTAAAGAATGGCTTGAAAGATATATTGAAATTGAAAC CATTGTATATGGATCCCCTTGTGTTTTCAAAATACCGAAAATAGACCTCGTGGTTAATGAATACTCAGATATTGAAAAAA TAGCACTTGACCTGAGAAATAACTGGGAACTTGGTATGGATCCCATTGACAACATAACTTTAACGTTAGAGGACAAAAAT ATAAAAATACTTATACTCGACACCGTTGACAGATTTGACGCCTGTACCTTCTGGGTAAACAAAGATATTCCCGTGATAGT AATAAAAAGCAACATCTCGAAAGAAAGACAACGTTTCAACCTTGCACATGAACTAGGACACTTATTATTGAAGATTAATG AAAACCTGGACGAAGAAAAAGTAGCTCACAGATTTGCCGGGGCATTTCTGATTCCTAAAGATACTTTTATTTCGGAAATC GGCCCAAAAAGAAAACGAATTGGTATAGAAGAATTGAGAATATTAAAACAAAAATATGGAATCAGCATGCAATCAATTGT AAAACGCGCAAGAGACTTGAATGTTATTAGTCAAAACACTTATAAGCAGATCTTTATTCAATTTAGAACTATGGGCATAA GCAAGGACGAACCCGGAGATACTGAGATAATGGAAACTTCGTCGCGCTTTGAACAACTCGTTTTAAAAGCATTAAGTGAG GAACTGATATCCCAAATGAAAGCAGCTGAGTTACTTGGAGTATCGCTGCAACAGCTACAAAAGGAGCTGTTCAATGAAAC AAAAGAACTCTGCTGA
Upstream 100 bases:
>100_bases TGCCGTCAAATACACTTTAACAGCTGTTGTAATCTTCTCCGGTGGTTTACAAAATTAAATGCTACATGGTATAATGTAAA CCAAGGAGGTGGAGGAAAAC
Downstream 100 bases:
>100_bases AGCAACAGTAGTTATAACAGATGCCAATATATTAATAGATCTAAAAAATGCAAATTTAGTCGGTGCCTTGCTAAGAACCG AATGGCGAGTCATAACAACA
Product: hypothetical protein
Products: NA
Alternate protein names: Helix-Turn-Helix Domain Protein; Helix-Turn-Helix Domain-Containing Protein; Zn Peptidase; Transcriptional Regulator HTH_3 Family; Conserved Domain Protein; Transcription Regulator; HTH Domain-Containing Protein; XRE Family Transcriptional Regulator; Phage-Like Protein; Regulatory Protein; DNA-Bining Transcriptional Regulator; Adenine Deaminase
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MSIGSRIKQARIRNNMSLRKLSEKVGVSAMAISKYERDEDVPSSKVLIRLSKALNVKVEYFFRPDLFPIESLSQVSYRKH SKLGKKILNAIKESIKEWLERYIEIETIVYGSPCVFKIPKIDLVVNEYSDIEKIALDLRNNWELGMDPIDNITLTLEDKN IKILILDTVDRFDACTFWVNKDIPVIVIKSNISKERQRFNLAHELGHLLLKINENLDEEKVAHRFAGAFLIPKDTFISEI GPKRKRIGIEELRILKQKYGISMQSIVKRARDLNVISQNTYKQIFIQFRTMGISKDEPGDTEIMETSSRFEQLVLKALSE ELISQMKAAELLGVSLQQLQKELFNETKELC
Sequences:
>Translated_351_residues MSIGSRIKQARIRNNMSLRKLSEKVGVSAMAISKYERDEDVPSSKVLIRLSKALNVKVEYFFRPDLFPIESLSQVSYRKH SKLGKKILNAIKESIKEWLERYIEIETIVYGSPCVFKIPKIDLVVNEYSDIEKIALDLRNNWELGMDPIDNITLTLEDKN IKILILDTVDRFDACTFWVNKDIPVIVIKSNISKERQRFNLAHELGHLLLKINENLDEEKVAHRFAGAFLIPKDTFISEI GPKRKRIGIEELRILKQKYGISMQSIVKRARDLNVISQNTYKQIFIQFRTMGISKDEPGDTEIMETSSRFEQLVLKALSE ELISQMKAAELLGVSLQQLQKELFNETKELC >Mature_350_residues SIGSRIKQARIRNNMSLRKLSEKVGVSAMAISKYERDEDVPSSKVLIRLSKALNVKVEYFFRPDLFPIESLSQVSYRKHS KLGKKILNAIKESIKEWLERYIEIETIVYGSPCVFKIPKIDLVVNEYSDIEKIALDLRNNWELGMDPIDNITLTLEDKNI KILILDTVDRFDACTFWVNKDIPVIVIKSNISKERQRFNLAHELGHLLLKINENLDEEKVAHRFAGAFLIPKDTFISEIG PKRKRIGIEELRILKQKYGISMQSIVKRARDLNVISQNTYKQIFIQFRTMGISKDEPGDTEIMETSSRFEQLVLKALSEE LISQMKAAELLGVSLQQLQKELFNETKELC
Specific function: Unknown
COG id: COG2856
COG function: function code E; Predicted Zn peptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40564; Mature: 40433
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: PS50943 HTH_CROC1 ; PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIGSRIKQARIRNNMSLRKLSEKVGVSAMAISKYERDEDVPSSKVLIRLSKALNVKVEY CCHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHEEHHHHCEEEEE FFRPDLFPIESLSQVSYRKHSKLGKKILNAIKESIKEWLERYIEIETIVYGSPCVFKIPK EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEECCC IDLVVNEYSDIEKIALDLRNNWELGMDPIDNITLTLEDKNIKILILDTVDRFDACTFWVN EEEEECCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCEEEEEC KDIPVIVIKSNISKERQRFNLAHELGHLLLKINENLDEEKVAHRFAGAFLIPKDTFISEI CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCEEECCCHHHHHHC GPKRKRIGIEELRILKQKYGISMQSIVKRARDLNVISQNTYKQIFIQFRTMGISKDEPGD CCHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCC TEIMETSSRFEQLVLKALSEELISQMKAAELLGVSLQQLQKELFNETKELC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SIGSRIKQARIRNNMSLRKLSEKVGVSAMAISKYERDEDVPSSKVLIRLSKALNVKVEY CHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHEEHHHHCEEEEE FFRPDLFPIESLSQVSYRKHSKLGKKILNAIKESIKEWLERYIEIETIVYGSPCVFKIPK EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEECCC IDLVVNEYSDIEKIALDLRNNWELGMDPIDNITLTLEDKNIKILILDTVDRFDACTFWVN EEEEECCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCEEEEEC KDIPVIVIKSNISKERQRFNLAHELGHLLLKINENLDEEKVAHRFAGAFLIPKDTFISEI CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCEEECCCHHHHHHC GPKRKRIGIEELRILKQKYGISMQSIVKRARDLNVISQNTYKQIFIQFRTMGISKDEPGD CCHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCC TEIMETSSRFEQLVLKALSEELISQMKAAELLGVSLQQLQKELFNETKELC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA