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The map label for this gene is 239616928

Identifier: 239616928

GI number: 239616928

Start: 574791

End: 575894

Strand: Direct

Name: 239616928

Synonym: Kole_0525

Alternate gene names: NA

Gene position: 574791-575894 (Clockwise)

Preceding gene: 239616927

Following gene: 239616929

Centisome position: 24.97

GC content: 42.39

Gene sequence:

>1104_bases
ATGTTAACGGAAAAGCAGGTCTTTGAAATCAGAATATTGTACAGAGAGGGGTTAAGCAAGCTAGCAATAGCCAGGCGCCT
TGGCATTGCTCCCAACACCGTAAACAAATATCTTAATAAGGAGTGGTGTCAAATGGCAAAAAGAGGTTCGAAACTCGATC
CTTTCAAGGATTACATCGAGAAAAGGCTCCAGGAGTATCCCGAACTTACAGCGACAGTGTTGTTTAAGGAATTGGTGGAG
AGAGGTTATACCGGTAAACTGACAATACTCCGGATGTATGTGTCCTCAATAAGACCCAAGGGGAAACCTGAAATTGTTGT
CAGATTCGAAACAGAACCTGGTAGACAATTTCAGGTTGATTGGGGAACGGGTACAACGGTTATTGCGGGCGAAAAGACGA
CCGTTAAGTTCTTCATTATGGTGTTGAGCTATTCACGGATGCTGTACGCGGAGATAGTACCAGATGAAAAGCTTGAGACC
TTGATCCAAGCTCATCTGCATGCCTTTGAGTACTTTGGTGGTTATCCCTCAGAAGGTCTGTACGACAACATGAAAACCGT
TGTAAAGAAGCTTCAGAAACAGAAGGAATACAACGCCAGATTCATGGATTTTGCAAACTTCTACGGCTTTAAAGTGATTA
CTCACAGGCCATATAATCCAAAAGCCAAAGGAAAGGTCGAGAGGTTGGTTCCTTACGTAAGGGAGAATATTCTTTACGGC
CAGAGTTATTCGAGCCTAACGGAATTGAAGAACGTATTAAGAGATTGGTTAGCAATAGCAAACCAGCGACTCCATTCCGA
ATTAAAAGAAACCCCTCTCGAAAGATTCGAGAGGGAAAAGAATCACCTAAATGAGCTAAGTAAATTGTATCCCATTCGCA
GATTAAATACAAGACTCGTAAGAAACAAAGGCCAGATAGTCTACAAGGAAAGGGCATATCATGTTGGTAAAAAATACGTA
GGGGAAAGAGTCAATCTCCAGGTGGAAGGTTCACTACTGAAGATATACAGCAACGATGAACTCATTACAGTACATCCATT
GAAAGACCAGGTAGAAAAAAGGTCTTTGAGAGAATACCAGGCTCTTGTGGGTGATGCGGTATGA

Upstream 100 bases:

>100_bases
ATTATAAAATAGTAAAAACGTCGGTCAAAAATGAGCAAAAACATCGGTAAGAATTGAGTAGTAACATCTGAATATCTCAG
ATAGAAAAGGAGGTATTCAG

Downstream 100 bases:

>100_bases
GCTACGAAAAAGTACACAGCTTGTTGAAAGAACTGAAACTGGAAGGAATCTCCAGGGTATTGGATTCTTCTCTCCAAAAC
TGGAGCAAAGGAGATAAAGA

Product: Integrase catalytic region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MLTEKQVFEIRILYREGLSKLAIARRLGIAPNTVNKYLNKEWCQMAKRGSKLDPFKDYIEKRLQEYPELTATVLFKELVE
RGYTGKLTILRMYVSSIRPKGKPEIVVRFETEPGRQFQVDWGTGTTVIAGEKTTVKFFIMVLSYSRMLYAEIVPDEKLET
LIQAHLHAFEYFGGYPSEGLYDNMKTVVKKLQKQKEYNARFMDFANFYGFKVITHRPYNPKAKGKVERLVPYVRENILYG
QSYSSLTELKNVLRDWLAIANQRLHSELKETPLERFEREKNHLNELSKLYPIRRLNTRLVRNKGQIVYKERAYHVGKKYV
GERVNLQVEGSLLKIYSNDELITVHPLKDQVEKRSLREYQALVGDAV

Sequences:

>Translated_367_residues
MLTEKQVFEIRILYREGLSKLAIARRLGIAPNTVNKYLNKEWCQMAKRGSKLDPFKDYIEKRLQEYPELTATVLFKELVE
RGYTGKLTILRMYVSSIRPKGKPEIVVRFETEPGRQFQVDWGTGTTVIAGEKTTVKFFIMVLSYSRMLYAEIVPDEKLET
LIQAHLHAFEYFGGYPSEGLYDNMKTVVKKLQKQKEYNARFMDFANFYGFKVITHRPYNPKAKGKVERLVPYVRENILYG
QSYSSLTELKNVLRDWLAIANQRLHSELKETPLERFEREKNHLNELSKLYPIRRLNTRLVRNKGQIVYKERAYHVGKKYV
GERVNLQVEGSLLKIYSNDELITVHPLKDQVEKRSLREYQALVGDAV
>Mature_367_residues
MLTEKQVFEIRILYREGLSKLAIARRLGIAPNTVNKYLNKEWCQMAKRGSKLDPFKDYIEKRLQEYPELTATVLFKELVE
RGYTGKLTILRMYVSSIRPKGKPEIVVRFETEPGRQFQVDWGTGTTVIAGEKTTVKFFIMVLSYSRMLYAEIVPDEKLET
LIQAHLHAFEYFGGYPSEGLYDNMKTVVKKLQKQKEYNARFMDFANFYGFKVITHRPYNPKAKGKVERLVPYVRENILYG
QSYSSLTELKNVLRDWLAIANQRLHSELKETPLERFEREKNHLNELSKLYPIRRLNTRLVRNKGQIVYKERAYHVGKKYV
GERVNLQVEGSLLKIYSNDELITVHPLKDQVEKRSLREYQALVGDAV

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG4584

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012287
- InterPro:   IPR017894
- InterPro:   IPR001584
- InterPro:   IPR006120
- InterPro:   IPR012337 [H]

Pfam domain/function: PF02796 HTH_7; PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 43050; Mature: 43050

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTEKQVFEIRILYREGLSKLAIARRLGIAPNTVNKYLNKEWCQMAKRGSKLDPFKDYIE
CCCCHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHCCCCCCHHHHHHH
KRLQEYPELTATVLFKELVERGYTGKLTILRMYVSSIRPKGKPEIVVRFETEPGRQFQVD
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEE
WGTGTTVIAGEKTTVKFFIMVLSYSRMLYAEIVPDEKLETLIQAHLHAFEYFGGYPSEGL
CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCH
YDNMKTVVKKLQKQKEYNARFMDFANFYGFKVITHRPYNPKAKGKVERLVPYVRENILYG
HHHHHHHHHHHHHHHHHCHHHHHHHHHHCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCC
QSYSSLTELKNVLRDWLAIANQRLHSELKETPLERFEREKNHLNELSKLYPIRRLNTRLV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
RNKGQIVYKERAYHVGKKYVGERVNLQVEGSLLKIYSNDELITVHPLKDQVEKRSLREYQ
HCCCCEEEHHHHHHHHHHHHCCEEEEEECCCEEEEECCCCEEEEECCHHHHHHHHHHHHH
ALVGDAV
HHHCCCC
>Mature Secondary Structure
MLTEKQVFEIRILYREGLSKLAIARRLGIAPNTVNKYLNKEWCQMAKRGSKLDPFKDYIE
CCCCHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHCCCCCCHHHHHHH
KRLQEYPELTATVLFKELVERGYTGKLTILRMYVSSIRPKGKPEIVVRFETEPGRQFQVD
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEE
WGTGTTVIAGEKTTVKFFIMVLSYSRMLYAEIVPDEKLETLIQAHLHAFEYFGGYPSEGL
CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCH
YDNMKTVVKKLQKQKEYNARFMDFANFYGFKVITHRPYNPKAKGKVERLVPYVRENILYG
HHHHHHHHHHHHHHHHHCHHHHHHHHHHCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCC
QSYSSLTELKNVLRDWLAIANQRLHSELKETPLERFEREKNHLNELSKLYPIRRLNTRLV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
RNKGQIVYKERAYHVGKKYVGERVNLQVEGSLLKIYSNDELITVHPLKDQVEKRSLREYQ
HCCCCEEEHHHHHHHHHHHHCCEEEEEECCCEEEEECCCCEEEEECCHHHHHHHHHHHHH
ALVGDAV
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8382825 [H]