| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239616912
Identifier: 239616912
GI number: 239616912
Start: 553966
End: 554940
Strand: Direct
Name: 239616912
Synonym: Kole_0508
Alternate gene names: NA
Gene position: 553966-554940 (Clockwise)
Preceding gene: 239616911
Following gene: 239616919
Centisome position: 24.06
GC content: 40.41
Gene sequence:
>975_bases ATGAAGCATTTATACGCGAAAGTAGTTATCGTCTTTCTCGTTGTGGTTTTATCTGTATCAAGTTTCTGCGGAATTTTCGA TGAAGCCGACCTGCTACCTGGAACTCACTCGATCTTTTTTAATTACAGTGGACATCAACGGCATTTCTACATCCACATAC CGGAAAAGAAGAGGTATGAAAAATACCCGGTTGTTATTATGCTGCATGGAGGTGTTAGTAATTCCAAATTCTCCATGAAA CGTTTTGGTTGGATGGAACTTTCAGATAAGGAAGGTTTTATAGCTATTTTCCCAGATGCCTTGCCTCCTATTGGTGGGTC ATCTCCCGACAATACCATTTTTAGGCCGCAATCCTGGTGGGAAGGGTTGAATATCGATCCACGAAAGCTGGTTTTTAACG ATTCAGTGGATGATGTCGGGTTTATAGCCACAATTATACAGGAGCTAAAATCAGAAGATTTAATCGATGAAAAGCGCGTT TTCCTCACCGGATATTCTAATGGAGCTACAATGGCCATGTTTCTCGGGCTTAAACTTTCAAATGTTATAGCAGCGGTCGC ACCTGTTTGCGGTTTATATGTTCCTAAAGATCAACAAAAGATTTCATCACCAATTTCGGTGATGGTCATCATTGGTATGG ACGACCCTTTCAATCCTTATTATGGGGGACTTATTCTACCGCCATGGTCTATAAAAATAGTCAAGAAACCACCTGTTGAA ACCACTATCATGAAGTGGGTAAACTTACTGGGGCTTCCTGAACAGCCAGTTGAGCAATATGAAAATGAAGATGAGAAGTT CGTACTATACTCCAATGGTGAAACCGATTTTTATTTTCATGTATTCAAGAAATTAGGACACTTCTGGCCTCAGGCTGATT TAGACTATCCTTTGTGGTATTTCGGCGGAAGATATGATGAAATAAATGCCACAGAGATGATCTGGGAGTTTTTCAAGAAG CATCCAAAACGATGA
Upstream 100 bases:
>100_bases GTTATTCTCAAAATCAAACAAAATTGCTCAATTCTCCGTCAAATCTCTTGTGAAGAAGCTTGATGGCATGAACAGTCTTC GTAATAGAAGGAGGTTATAC
Downstream 100 bases:
>100_bases TTTTTTTCAGATCTGCTTTCTATTACTACTCCAGTGCTTTTTTCAGGGCAGCTCTTGCCAGGATTCTTGTGGAATCCAGA GTTGGTAGGGGAGATTCTTC
Product: Poly(3-hydroxybutyrate) depolymerase-like protein
Products: NA
Alternate protein names: Lipoprotein; Poly(3-Hydroxybutyrate) Depolymerase-Like Protein; Esterase; Secreted Hydrolase; Lipoprotein LpqP; Polyhydroxybutyrate Depolymerase; Esterase Lipoprotein LpqC; Esterase Lipoprotein; Hydrolase; Alpha/Beta Family Hydrolase; Feruloyl Esterase; Poly(3-Hydroxybutyrate) Depolymerase
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MKHLYAKVVIVFLVVVLSVSSFCGIFDEADLLPGTHSIFFNYSGHQRHFYIHIPEKKRYEKYPVVIMLHGGVSNSKFSMK RFGWMELSDKEGFIAIFPDALPPIGGSSPDNTIFRPQSWWEGLNIDPRKLVFNDSVDDVGFIATIIQELKSEDLIDEKRV FLTGYSNGATMAMFLGLKLSNVIAAVAPVCGLYVPKDQQKISSPISVMVIIGMDDPFNPYYGGLILPPWSIKIVKKPPVE TTIMKWVNLLGLPEQPVEQYENEDEKFVLYSNGETDFYFHVFKKLGHFWPQADLDYPLWYFGGRYDEINATEMIWEFFKK HPKR
Sequences:
>Translated_324_residues MKHLYAKVVIVFLVVVLSVSSFCGIFDEADLLPGTHSIFFNYSGHQRHFYIHIPEKKRYEKYPVVIMLHGGVSNSKFSMK RFGWMELSDKEGFIAIFPDALPPIGGSSPDNTIFRPQSWWEGLNIDPRKLVFNDSVDDVGFIATIIQELKSEDLIDEKRV FLTGYSNGATMAMFLGLKLSNVIAAVAPVCGLYVPKDQQKISSPISVMVIIGMDDPFNPYYGGLILPPWSIKIVKKPPVE TTIMKWVNLLGLPEQPVEQYENEDEKFVLYSNGETDFYFHVFKKLGHFWPQADLDYPLWYFGGRYDEINATEMIWEFFKK HPKR >Mature_324_residues MKHLYAKVVIVFLVVVLSVSSFCGIFDEADLLPGTHSIFFNYSGHQRHFYIHIPEKKRYEKYPVVIMLHGGVSNSKFSMK RFGWMELSDKEGFIAIFPDALPPIGGSSPDNTIFRPQSWWEGLNIDPRKLVFNDSVDDVGFIATIIQELKSEDLIDEKRV FLTGYSNGATMAMFLGLKLSNVIAAVAPVCGLYVPKDQQKISSPISVMVIIGMDDPFNPYYGGLILPPWSIKIVKKPPVE TTIMKWVNLLGLPEQPVEQYENEDEKFVLYSNGETDFYFHVFKKLGHFWPQADLDYPLWYFGGRYDEINATEMIWEFFKK HPKR
Specific function: Unknown
COG id: COG3509
COG function: function code Q; Poly(3-hydroxybutyrate) depolymerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37199; Mature: 37199
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHLYAKVVIVFLVVVLSVSSFCGIFDEADLLPGTHSIFFNYSGHQRHFYIHIPEKKRYE CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCC KYPVVIMLHGGVSNSKFSMKRFGWMELSDKEGFIAIFPDALPPIGGSSPDNTIFRPQSWW CCCEEEEEECCCCCCCCHHHHCCCEEECCCCCEEEECCCCCCCCCCCCCCCCEECCHHHH EGLNIDPRKLVFNDSVDDVGFIATIIQELKSEDLIDEKRVFLTGYSNGATMAMFLGLKLS CCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEHHHHHHHH NVIAAVAPVCGLYVPKDQQKISSPISVMVIIGMDDPFNPYYGGLILPPWSIKIVKKPPVE HHHHHHHHHHHCCCCCHHHHHCCCEEEEEEEECCCCCCCCCCCEEECCCEEEEEECCCCH TTIMKWVNLLGLPEQPVEQYENEDEKFVLYSNGETDFYFHVFKKLGHFWPQADLDYPLWY HHHHHHHHHCCCCCHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCEEE FGGRYDEINATEMIWEFFKKHPKR CCCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MKHLYAKVVIVFLVVVLSVSSFCGIFDEADLLPGTHSIFFNYSGHQRHFYIHIPEKKRYE CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCC KYPVVIMLHGGVSNSKFSMKRFGWMELSDKEGFIAIFPDALPPIGGSSPDNTIFRPQSWW CCCEEEEEECCCCCCCCHHHHCCCEEECCCCCEEEECCCCCCCCCCCCCCCCEECCHHHH EGLNIDPRKLVFNDSVDDVGFIATIIQELKSEDLIDEKRVFLTGYSNGATMAMFLGLKLS CCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEHHHHHHHH NVIAAVAPVCGLYVPKDQQKISSPISVMVIIGMDDPFNPYYGGLILPPWSIKIVKKPPVE HHHHHHHHHHHCCCCCHHHHHCCCEEEEEEEECCCCCCCCCCCEEECCCEEEEEECCCCH TTIMKWVNLLGLPEQPVEQYENEDEKFVLYSNGETDFYFHVFKKLGHFWPQADLDYPLWY HHHHHHHHHCCCCCHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCEEE FGGRYDEINATEMIWEFFKKHPKR CCCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA